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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007582
UUCD1 version UUC-ArT-00593
Ensembl Protein ID AT5G01960.1
UniProt Accession Q8L610; Q8L610_ARATH
Genbank Protein ID AAM20562.1; AAN15601.1; AED90414.1
Protein Name Putative uncharacterized protein At5g01960; RING/U-box superfamily protein
Genbank Nucleotide ID AY099711; BT000282; CP002688
Gene Name At5g01960; T7H20.10; T7H20_10
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G01960 AT5G01960.1 AT5G01960.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 3.70e-09 37.8 365 403
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiC+e + + p++l+C+H+f++dC+  w        +e +CPlCr
   Q: 365  CAICQEKMHT-PILLRCKHMFCEDCVSEW------FERERTCPLCR 403
           ********99.999***************......9*********8 PP
   
Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
METPGASHDS FRGSPRRNSI LSASNIIQAP ISTLLEYSGL FRARPSPSHE AETLVSDDSS 60
GLSNGEVAIR IIGNTEQDAE TDTNALREPG HSELLGSSAT QVDPMGGASE GASQAAPGDP 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007582|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTGTAGTCAC GCATGTTATT TTAGTAGGCT TGCATTAAAG CCCATTTAGG TTATAAGGCC 60
CATAATGTAT TTAATAGGCT GCCCATTTAG AGAAGACTGT CGTCGCTTCC TTTAAGTCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007582|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
SMART

SM00184--RING
Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
KEGG ath:AT5G01960
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000709 Aegilops tauschii 76.92 2.00e-124 437.00
IUUC-Aml-002361 Ailuropoda melanoleuca 29.36 3.00e-41 161.00
IUUC-Apl-003875 Anas platyrhynchos 30.36 7.00e-38 150.00
IUUC-Aca-005181 Anolis carolinensis 29.27 6.00e-40 157.00
IUUC-Aly-005949 Arabidopsis lyrata 95.12 0.00e+00 820.00
IUUC-Ame-011821 Astyanax mexicanus 33.66 6.00e-45 174.00
IUUC-Bta-012475 Bos taurus 29.91 1.00e-41 163.00
IUUC-Bdi-014696 Brachypodium distachyon 67.73 2.00e-158 551.00
IUUC-Bol-015956 Brassica oleracea 81.72 0.00e+00 683.00
IUUC-Bra-016928 Brassica rapa 82.88 0.00e+00 689.00
IUUC-Cel-018190 Caenorhabditis elegans 24.00 1.00e-17 83.20
IUUC-Cja-019920 Callithrix jacchus 30.03 3.00e-42 165.00
IUUC-Cfa-020715 Canis familiaris 29.66 2.00e-41 162.00
IUUC-Cpo-021829 Cavia porcellus 29.66 5.00e-41 160.00
IUUC-Cre-022592 Chlamydomonas reinhardtii 45.45 4.00e-20 91.70
IUUC-Csa-023156 Chlorocebus sabaeus 29.71 3.00e-39 155.00
IUUC-Cho-025100 Choloepus hoffmanni 30.28 2.00e-42 165.00
IUUC-Dre-027857 Danio rerio 31.17 3.00e-43 168.00
IUUC-Dno-030046 Dasypus novemcinctus 29.97 2.00e-42 166.00
IUUC-Dor-030446 Dipodomys ordii 46.07 2.00e-20 93.20
IUUC-Dse-031284 Dothistroma septosporum 34.33 2.00e-10 58.90
IUUC-Dme-031681 Drosophila melanogaster 33.33 3.00e-29 122.00
IUUC-Ete-032456 Echinops telfairi 26.05 2.00e-32 132.00
IUUC-Eca-033852 Equus caballus 29.50 1.00e-40 160.00
IUUC-Eeu-034649 Erinaceus europaeus 46.67 9.00e-10 57.40
IUUC-Fca-036281 Felis catus 29.28 3.00e-41 161.00
IUUC-Fal-037647 Ficedula albicollis 32.65 4.00e-41 160.00
IUUC-Gmo-038501 Gadus morhua 27.76 1.00e-25 109.00
IUUC-Gga-040867 Gallus gallus 31.19 4.00e-44 171.00
IUUC-Gac-042530 Gasterosteus aculeatus 25.88 5.00e-29 121.00
IUUC-Gma-043596 Glycine max 70.79 1.00e-154 538.00
IUUC-Ggo-045577 Gorilla gorilla 27.48 3.00e-36 145.00
IUUC-Hsa-046314 Homo sapiens 30.03 2.00e-42 166.00
IUUC-Hvu-047080 Hordeum vulgare 78.88 2.00e-126 443.00
IUUC-Itr-048888 Ictidomys tridecemlineatus 27.18 1.00e-37 150.00
IUUC-Lch-049901 Latimeria chalumnae 32.20 5.00e-42 164.00
IUUC-Lpe-051163 Leersia perrieri 66.59 2.00e-156 544.00
IUUC-Loc-051924 Lepisosteus oculatus 31.29 3.00e-43 168.00
IUUC-Laf-053448 Loxodonta africana 29.72 2.00e-41 162.00
IUUC-Mcc-054949 Macaca mulatta 30.03 6.00e-41 160.00
IUUC-Meu-056056 Macropus eugenii 33.93 4.00e-30 124.00
IUUC-Mtr-058255 Medicago truncatula 71.74 5.00e-155 540.00
IUUC-Mga-059843 Meleagris gallopavo 31.19 4.00e-44 171.00
IUUC-Mmr-061235 Microcebus murinus 30.21 1.00e-42 166.00
IUUC-Mdo-062268 Monodelphis domestica 29.93 2.00e-40 159.00
IUUC-Mmu-063985 Mus musculus 29.41 7.00e-41 160.00
IUUC-Mac-065421 Musa acuminata 66.52 8.00e-162 562.00
IUUC-Mpu-066469 Mustela putorius furo 29.66 2.00e-41 162.00
IUUC-Mlu-067707 Myotis lucifugus 29.47 5.00e-41 161.00
IUUC-Nle-069009 Nomascus leucogenys 27.48 1.00e-37 149.00
IUUC-Ont-072228 Oreochromis niloticus 30.61 5.00e-42 164.00
IUUC-Oan-073490 Ornithorhynchus anatinus 30.18 2.00e-38 152.00
IUUC-Ocu-074346 Oryctolagus cuniculus 27.18 2.00e-35 142.00
IUUC-Oba-075245 Oryza barthii 80.08 4.00e-127 446.00
IUUC-Obr-076737 Oryza brachyantha 84.06 2.00e-120 424.00
IUUC-Ogl-077684 Oryza glaberrima 82.03 1.00e-152 531.00
IUUC-Ogu-078859 Oryza glumaepatula 82.03 1.00e-152 532.00
IUUC-Oin-079424 Oryza indica 82.37 1.00e-152 532.00
IUUC-Ome-081614 Oryza meridionalis 84.75 1.00e-144 505.00
IUUC-Oni-082296 Oryza nivara 84.75 3.00e-144 504.00
IUUC-Opu-083546 Oryza punctata 84.75 1.00e-144 505.00
IUUC-Oru-085138 Oryza rufipogon 65.25 1.00e-146 512.00
IUUC-Osa-085729 Oryza sativa 66.02 2.00e-153 535.00
IUUC-Ola-086621 Oryzias latipes 30.95 6.00e-42 164.00
IUUC-Olu-087799 Ostreococcus lucimarinus 44.38 1.00e-36 144.00
IUUC-Oga-087950 Otolemur garnettii 27.32 2.00e-36 145.00
IUUC-Oar-089816 Ovis aries 27.60 2.00e-38 152.00
IUUC-Ptr-091587 Pan troglodytes 30.03 4.00e-42 165.00
IUUC-Pan-092883 Papio anubis 30.03 6.00e-41 160.00
IUUC-Psi-093766 Pelodiscus sinensis 30.87 2.00e-36 145.00
IUUC-Ppa-095990 Physcomitrella patens 69.81 1.00e-125 442.00
IUUC-Pfo-097090 Poecilia formosa 31.94 3.00e-26 112.00
IUUC-Pab-098474 Pongo abelii 28.50 1.00e-37 149.00
IUUC-Pop-098860 Populus trichocarpa 64.61 9.00e-157 545.00
IUUC-Pca-100148 Procavia capensis 30.54 3.00e-41 161.00
IUUC-Ppe-101186 Prunus persica 68.29 6.00e-159 553.00
IUUC-Pva-102165 Pteropus vampyrus 29.36 2.00e-41 162.00
IUUC-Rno-105220 Rattus norvegicus 29.41 2.00e-40 159.00
IUUC-Sha-107537 Sarcophilus harrisii 27.43 1.00e-38 153.00
IUUC-Smo-109495 Selaginella moellendorffii 56.31 6.00e-128 449.00
IUUC-Sit-110120 Setaria italica 66.67 7.00e-154 536.00
IUUC-Sly-111923 Solanum lycopersicum 68.69 4.00e-162 563.00
IUUC-Stu-112302 Solanum tuberosum 68.09 5.00e-156 543.00
IUUC-Sar-113494 Sorex araneus 46.15 1.00e-18 87.00
IUUC-Sbi-114889 Sorghum bicolor 66.04 7.00e-152 529.00
IUUC-Ssc-115358 Sus scrofa 29.28 6.00e-41 160.00
IUUC-Tgu-117409 Taeniopygia guttata 28.86 1.00e-31 129.00
IUUC-Tru-117949 Takifugu rubripes 29.59 5.00e-44 171.00
IUUC-Tsy-118995 Tarsius syrichta 27.63 2.00e-32 132.00
IUUC-Tni-120152 Tetraodon nigroviridis 30.55 9.00e-43 166.00
IUUC-Tca-121155 Theobroma cacao 70.56 2.00e-180 624.00
IUUC-Tae-124755 Triticum aestivum 67.98 8.00e-161 559.00
IUUC-Tur-126400 Triticum urartu 77.35 2.00e-138 484.00
IUUC-Ttr-128557 Tursiops truncatus 29.91 1.00e-41 163.00
IUUC-Vpa-130045 Vicugna pacos 39.18 3.00e-17 82.00
IUUC-Vvi-131323 Vitis vinifera 69.11 1.00e-165 575.00
IUUC-Xtr-132785 Xenopus tropicalis 31.63 7.00e-38 150.00
IUUC-Xma-133737 Xiphophorus maculatus 31.29 2.00e-42 165.00
IUUC-Yli-134581 Yarrowia lipolytica 41.54 2.00e-09 55.80
Created Date 25-Jun-2017

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