iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-012559

Ensembl Protein ID

ENSBTAP00000047901.1

UniProt Accession

Q0P568; Q0P568_BOVIN

Genbank Protein ID

AAI20442.1

Protein Name

Ubiquitin fusion degradation 1 like

Genbank Nucleotide ID

DAAA02045760

Gene Name

UFD1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000004284.5	ENSBTAT00000056937.1	ENSBTAP00000047901.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/Other	97.36	5.00e-127	451.00	IUUC-Hsa-046680
UBD/Other/Other	97.36	5.00e-127	451.00	IUUC-Hsa-046680
UBD/Other/Other	48.73	2.00e-51	196.00	IUUC-Sce-106174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Bos taurus

Protein Sequence
(Fasta)

MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN 60
ITYPMLFKLT NKNSDRVTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCGCTCTGG CGCGGCGCGG CGGAGGCGTC CACTATGGTA AGTGGCCGGC GTGCAGGGCC 60
GGCCGGGGCG GGCGGACGTG CAGGCCGAGA GGTGCCGAGT CACCCGGCCT GAGTCCGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004854--UFD1

Pfam

PF03152--UFD1

Gene Ontology

GO:0005634--C:nucleus
GO:0036501--C:UFD1-NPL4 complex
GO:0034098--C:VCP-NPL4-UFD1 AAA ATPase complex
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0039536--P:negative regulation of RIG-I signaling pathway
GO:0032480--P:negative regulation of type I interferon production
GO:0030970--P:retrograde protein transport, ER to cytosol
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

bta:507124

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000441	Aegilops tauschii	50.90	5.00e-62	231.00
IUUC-Aml-001398	Ailuropoda melanoleuca	97.35	2.00e-127	448.00
IUUC-Atr-002449	Amborella trichopoda	59.33	1.00e-52	199.00
IUUC-Apl-004065	Anas platyrhynchos	92.86	1.00e-95	342.00
IUUC-Aca-004973	Anolis carolinensis	94.27	4.00e-129	454.00
IUUC-Aly-005501	Arabidopsis lyrata	57.61	1.00e-62	233.00
IUUC-Ath-007324	Arabidopsis thaliana	58.70	1.00e-62	233.00
IUUC-Ago-007918	Ashbya gossypii	48.99	7.00e-54	204.00
IUUC-Acl-008362	Aspergillus clavatus	54.55	2.00e-63	235.00
IUUC-Afl-008690	Aspergillus flavus	54.17	3.00e-64	238.00
IUUC-Afu-008787	Aspergillus fumigatus	55.02	8.00e-63	234.00
IUUC-Ani-009385	Aspergillus nidulans	56.00	2.00e-56	213.00
IUUC-Ang-009709	Aspergillus niger	56.22	8.00e-64	237.00
IUUC-Aor-010240	Aspergillus oryzae	54.17	3.00e-64	238.00
IUUC-Ate-010551	Aspergillus terreus	53.10	1.00e-64	240.00
IUUC-Ame-011417	Astyanax mexicanus	92.98	9.00e-120	422.00
IUUC-Bgr-011986	Blumeria graminis	56.25	6.00e-62	230.00
IUUC-Bci-013767	Botrytis cinerea	55.79	5.00e-58	218.00
IUUC-Bdi-014579	Brachypodium distachyon	55.56	7.00e-59	220.00
IUUC-Bol-015423	Brassica oleracea	58.15	1.00e-61	229.00
IUUC-Bra-017620	Brassica rapa	57.54	9.00e-60	223.00
IUUC-Cel-018590	Caenorhabditis elegans	54.22	4.00e-47	181.00
IUUC-Cja-019487	Callithrix jacchus	97.80	1.00e-128	452.00
IUUC-Cfa-020497	Canis familiaris	97.80	1.00e-128	452.00
IUUC-Cpo-022150	Cavia porcellus	96.90	1.00e-126	445.00
IUUC-Cre-023007	Chlamydomonas reinhardtii	55.25	4.00e-57	214.00
IUUC-Csa-023602	Chlorocebus sabaeus	97.36	4.00e-128	450.00
IUUC-Cin-025594	Ciona intestinalis	66.49	7.00e-73	267.00
IUUC-Csv-026040	Ciona savignyi	62.68	7.00e-73	266.00
IUUC-Cgl-026460	Colletotrichum gloeosporioides	47.64	2.00e-51	196.00
IUUC-Cne-026990	Cryptococcus neoformans	42.49	7.00e-40	158.00
IUUC-Cme-027323	Cyanidioschyzon merolae	48.10	8.00e-42	164.00
IUUC-Dre-027987	Danio rerio	91.23	5.00e-116	410.00
IUUC-Dor-030294	Dipodomys ordii	95.59	7.00e-125	439.00
IUUC-Dse-031411	Dothistroma septosporum	50.26	4.00e-55	208.00
IUUC-Dme-031798	Drosophila melanogaster	71.36	3.00e-81	295.00
IUUC-Ete-032432	Echinops telfairi	96.04	3.00e-126	444.00
IUUC-Eca-034427	Equus caballus	97.36	4.00e-128	450.00
IUUC-Eeu-034917	Erinaceus europaeus	98.17	5.00e-90	323.00
IUUC-Fca-035380	Felis catus	97.80	1.00e-128	452.00
IUUC-Fal-037659	Ficedula albicollis	95.05	7.00e-122	429.00
IUUC-Fox-038062	Fusarium oxysporum	44.90	3.00e-21	94.40
IUUC-Fso-038111	Fusarium solani	45.81	5.00e-52	198.00
IUUC-Gmo-039298	Gadus morhua	95.94	7.00e-107	380.00
IUUC-Ggr-039771	Gaeumannomyces graminis	51.03	7.00e-56	211.00
IUUC-Gga-040313	Gallus gallus	94.27	4.00e-124	437.00
IUUC-Gac-042009	Gasterosteus aculeatus	95.45	2.00e-107	381.00
IUUC-Gma-043844	Glycine max	58.85	7.00e-66	243.00
IUUC-Ggo-044639	Gorilla gorilla	83.65	5.00e-122	430.00
IUUC-Hsa-046680	Homo sapiens	97.36	4.00e-128	450.00
IUUC-Hvu-047614	Hordeum vulgare	50.90	4.00e-62	231.00
IUUC-Itr-047987	Ictidomys tridecemlineatus	97.35	2.00e-127	448.00
IUUC-Kpa-049136	Komagataella pastoris	45.88	4.00e-54	204.00
IUUC-Lch-050607	Latimeria chalumnae	90.54	7.00e-115	406.00
IUUC-Lpe-050726	Leersia perrieri	55.68	4.00e-60	225.00
IUUC-Loc-051848	Lepisosteus oculatus	91.70	7.00e-119	419.00
IUUC-Lma-053187	Leptosphaeria maculans	51.43	2.00e-63	236.00
IUUC-Laf-053569	Loxodonta africana	95.20	1.00e-124	439.00
IUUC-Mcc-055275	Macaca mulatta	96.92	2.00e-127	447.00
IUUC-Mor-056967	Magnaporthe oryzae	50.51	8.00e-57	214.00
IUUC-Mpo-057399	Magnaporthe poae	51.55	3.00e-56	211.00
IUUC-Mtr-058353	Medicago truncatula	57.07	4.00e-61	228.00
IUUC-Mla-058830	Melampsora laricipopulina	44.56	1.00e-42	167.00
IUUC-Mga-059803	Meleagris gallopavo	92.86	1.00e-95	342.00
IUUC-Mvi-060456	Microbotryum violaceum	46.81	2.00e-45	176.00
IUUC-Mmr-060573	Microcebus murinus	96.92	2.00e-127	448.00
IUUC-Mdo-062831	Monodelphis domestica	95.59	3.00e-125	441.00
IUUC-Mmu-064302	Mus musculus	96.48	1.00e-126	445.00
IUUC-Mac-064745	Musa acuminata	51.54	3.00e-63	235.00
IUUC-Mpu-065922	Mustela putorius furo	97.36	4.00e-128	450.00
IUUC-Mlu-068236	Myotis lucifugus	96.07	7.00e-126	442.00
IUUC-Nfi-068417	Neosartorya fischeri	55.02	7.00e-63	234.00
IUUC-Ncr-068747	Neurospora crassa	48.96	2.00e-53	202.00
IUUC-Nle-069948	Nomascus leucogenys	83.71	5.00e-123	434.00
IUUC-Opr-070919	Ochotona princeps	79.59	3.00e-105	374.00
IUUC-Ont-071467	Oreochromis niloticus	88.60	3.00e-112	398.00
IUUC-Oan-073436	Ornithorhynchus anatinus	76.36	1.00e-69	254.00
IUUC-Ocu-074427	Oryctolagus cuniculus	98.24	2.00e-120	425.00
IUUC-Oba-075440	Oryza barthii	52.13	1.00e-60	226.00
IUUC-Obr-076275	Oryza brachyantha	55.56	2.00e-58	219.00
IUUC-Ogl-077237	Oryza glaberrima	51.64	2.00e-60	226.00
IUUC-Ogu-078934	Oryza glumaepatula	52.13	1.00e-60	226.00
IUUC-Oin-079475	Oryza indica	53.52	5.00e-61	227.00
IUUC-Olo-080285	Oryza longistaminata	59.64	4.00e-57	213.00
IUUC-Ome-081887	Oryza meridionalis	52.13	1.00e-60	226.00
IUUC-Oni-082064	Oryza nivara	52.61	6.00e-61	227.00
IUUC-Opu-083610	Oryza punctata	51.17	4.00e-60	224.00
IUUC-Oru-084911	Oryza rufipogon	52.13	2.00e-60	225.00
IUUC-Osa-085366	Oryza sativa	52.13	1.00e-60	226.00
IUUC-Ola-086846	Oryzias latipes	76.03	3.00e-104	371.00
IUUC-Olu-087879	Ostreococcus lucimarinus	53.19	8.00e-56	210.00
IUUC-Oga-089017	Otolemur garnettii	96.07	1.00e-125	442.00
IUUC-Oar-089970	Ovis aries	97.35	3.00e-127	447.00
IUUC-Ptr-091147	Pan troglodytes	89.52	3.00e-120	424.00
IUUC-Pan-091757	Papio anubis	87.28	3.00e-109	387.00
IUUC-Psi-093931	Pelodiscus sinensis	94.71	2.00e-124	438.00
IUUC-Pno-094775	Phaeosphaeria nodorum	48.62	2.00e-59	222.00
IUUC-Ppa-095156	Physcomitrella patens	55.98	5.00e-60	224.00
IUUC-Pfo-097295	Poecilia formosa	88.70	2.00e-112	398.00
IUUC-Pab-098537	Pongo abelii	97.36	4.00e-128	450.00
IUUC-Pop-099436	Populus trichocarpa	56.52	9.00e-63	233.00
IUUC-Pca-100631	Procavia capensis	80.38	3.00e-115	407.00
IUUC-Ppe-101259	Prunus persica	51.79	4.00e-62	231.00
IUUC-Pva-102679	Pteropus vampyrus	89.88	1.00e-124	439.00
IUUC-Pgr-103475	Puccinia graminis	45.59	1.00e-44	174.00
IUUC-Ptt-104012	Puccinia triticina	38.73	6.00e-32	131.00
IUUC-Pte-104071	Pyrenophora teres	51.43	7.00e-62	230.00
IUUC-Pyt-104501	Pyrenophora triticirepentis	51.43	8.00e-62	230.00
IUUC-Rno-104858	Rattus norvegicus	96.48	1.00e-126	445.00
IUUC-Sce-106174	Saccharomyces cerevisiae	48.73	4.00e-54	204.00
IUUC-Sha-107075	Sarcophilus harrisii	96.46	4.00e-126	444.00
IUUC-Sja-107663	Schizosaccharomyces japonicus	51.52	4.00e-57	214.00
IUUC-Spo-108259	Schizosaccharomyces pombe	50.00	4.00e-52	198.00
IUUC-Ssl-108473	Sclerotinia sclerotiorum	57.86	5.00e-50	191.00
IUUC-Smo-109290	Selaginella moellendorffii	58.15	2.00e-60	226.00
IUUC-Sit-109992	Setaria italica	56.15	2.00e-60	225.00
IUUC-Sly-110858	Solanum lycopersicum	55.50	4.00e-61	228.00
IUUC-Stu-112028	Solanum tuberosum	56.35	8.00e-59	220.00
IUUC-Sar-113061	Sorex araneus	96.48	2.00e-126	445.00
IUUC-Sbi-114882	Sorghum bicolor	56.08	5.00e-61	227.00
IUUC-Sre-115104	Sporisorium reilianum	46.94	4.00e-44	172.00
IUUC-Ssc-115403	Sus scrofa	97.36	5.00e-128	450.00
IUUC-Tgu-117013	Taeniopygia guttata	95.13	1.00e-124	439.00
IUUC-Tru-118307	Takifugu rubripes	89.87	5.00e-109	387.00
IUUC-Tsy-119309	Tarsius syrichta	90.91	8.00e-57	213.00
IUUC-Tni-120209	Tetraodon nigroviridis	88.60	6.00e-107	380.00
IUUC-Tca-121421	Theobroma cacao	52.23	5.00e-63	234.00
IUUC-Tre-122235	Trichoderma reesei	45.64	2.00e-51	196.00
IUUC-Tvi-122421	Trichoderma virens	45.59	3.00e-52	198.00
IUUC-Tae-124587	Triticum aestivum	50.90	3.00e-62	231.00
IUUC-Tur-126353	Triticum urartu	37.50	1.00e-25	111.00
IUUC-Tme-126918	Tuber melanosporum	54.17	1.00e-59	223.00
IUUC-Ttr-129286	Tursiops truncatus	85.60	4.00e-112	397.00
IUUC-Uma-129404	Ustilago maydis	47.96	2.00e-45	176.00
IUUC-Vda-129746	Verticillium dahliae	47.98	9.00e-53	200.00
IUUC-Vpa-130648	Vicugna pacos	63.74	7.00e-24	104.00
IUUC-Vvi-131301	Vitis vinifera	57.61	8.00e-63	233.00
IUUC-Xtr-132583	Xenopus tropicalis	93.39	1.00e-121	429.00
IUUC-Xma-133129	Xiphophorus maculatus	88.70	2.00e-112	398.00
IUUC-Yli-134515	Yarrowia lipolytica	46.70	1.00e-51	196.00
IUUC-Zma-135266	Zea mays	56.08	5.00e-61	227.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence