iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ola-086364

Ensembl Protein ID

ENSORLP00000015489.1

UniProt Accession

H2MAD7; H2MAD7_ORYLA

Genbank Protein ID

ENSORLP00000015489

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04056971

Gene Name

LDB1 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000012373.1	ENSORLT00000015490.1	ENSORLP00000015489.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	62.06	1.00e-125	446.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryzias latipes

Protein Sequence
(Fasta)

CFLVCFFAGC SSKSFKLYSP KEPPNGSTFP PFHPGTMLDR DVGPTPMYPP TYLEPGIGRH 60
TPYGNQTDYR IFELNKRLQN WTEECDNLWW DAFTTEFFED DAMLTITFCL EDGPKRYTIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTTCCTTG TTTGTTTCTT TGCAGGCTGT TCCTCTAAGT CGTTCAAGCT GTACTCCCCA 60
AAGGAGCCCC CCAACGGTAG CACTTTTCCT CCCTTCCACC CCGGCACCAT GCTGGACAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030167--LDB1
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0005634--C:nucleus
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	25.30	2.00e-04	41.60
IUUC-Aml-002031	Ailuropoda melanoleuca	92.18	0.00e+00	721.00
IUUC-Atr-003083	Amborella trichopoda	23.19	7.00e-04	39.70
IUUC-Apl-004210	Anas platyrhynchos	93.31	4.00e-174	603.00
IUUC-Aca-005241	Anolis carolinensis	94.10	0.00e+00	741.00
IUUC-Aly-006204	Arabidopsis lyrata	25.00	3.00e-06	47.40
IUUC-Ath-007339	Arabidopsis thaliana	25.00	3.00e-06	47.40
IUUC-Acl-008255	Aspergillus clavatus	20.18	7.00e-06	45.80
IUUC-Ame-010910	Astyanax mexicanus	95.82	0.00e+00	734.00
IUUC-Bgr-012180	Blumeria graminis	21.83	2.00e-06	47.80
IUUC-Bta-012596	Bos taurus	72.27	9.00e-152	529.00
IUUC-Bci-013927	Botrytis cinerea	26.03	2.00e-06	47.80
IUUC-Bol-015721	Brassica oleracea	25.53	8.00e-07	49.30
IUUC-Bra-017183	Brassica rapa	25.53	8.00e-07	49.30
IUUC-Cel-018189	Caenorhabditis elegans	34.04	3.00e-30	126.00
IUUC-Cja-019586	Callithrix jacchus	74.01	2.00e-157	548.00
IUUC-Cfa-021188	Canis familiaris	92.18	0.00e+00	719.00
IUUC-Cpo-022350	Cavia porcellus	93.55	0.00e+00	727.00
IUUC-Csa-023816	Chlorocebus sabaeus	93.12	0.00e+00	733.00
IUUC-Cho-024958	Choloepus hoffmanni	61.26	2.00e-64	239.00
IUUC-Cin-025721	Ciona intestinalis	50.94	2.00e-87	315.00
IUUC-Csv-026065	Ciona savignyi	52.72	6.00e-92	330.00
IUUC-Dre-027356	Danio rerio	68.45	2.00e-148	518.00
IUUC-Dno-029918	Dasypus novemcinctus	93.16	0.00e+00	702.00
IUUC-Dor-030634	Dipodomys ordii	93.87	0.00e+00	678.00
IUUC-Dse-031245	Dothistroma septosporum	24.00	5.00e-04	39.70
IUUC-Dme-031667	Drosophila melanogaster	63.66	3.00e-123	435.00
IUUC-Ete-032246	Echinops telfairi	71.15	5.00e-152	530.00
IUUC-Eca-034015	Equus caballus	73.18	2.00e-157	548.00
IUUC-Eeu-034902	Erinaceus europaeus	93.87	0.00e+00	678.00
IUUC-Fca-035903	Felis catus	93.33	0.00e+00	728.00
IUUC-Fal-037407	Ficedula albicollis	72.55	3.00e-151	527.00
IUUC-Gmo-039466	Gadus morhua	93.00	0.00e+00	759.00
IUUC-Ggr-040030	Gaeumannomyces graminis	22.98	2.00e-03	37.70
IUUC-Gga-040214	Gallus gallus	93.61	0.00e+00	732.00
IUUC-Gac-042214	Gasterosteus aculeatus	93.87	0.00e+00	771.00
IUUC-Gma-042794	Glycine max	24.53	5.00e-07	50.10
IUUC-Ggo-044988	Gorilla gorilla	73.46	3.00e-158	550.00
IUUC-Hsa-046092	Homo sapiens	72.91	8.00e-155	539.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	93.12	0.00e+00	733.00
IUUC-Lch-049895	Latimeria chalumnae	78.63	5.00e-99	353.00
IUUC-Lpe-050806	Leersia perrieri	25.35	2.00e-06	47.80
IUUC-Loc-052845	Lepisosteus oculatus	95.09	0.00e+00	749.00
IUUC-Lma-053090	Leptosphaeria maculans	23.44	1.00e-03	38.50
IUUC-Laf-054538	Loxodonta africana	90.74	0.00e+00	626.00
IUUC-Mcc-055116	Macaca mulatta	69.07	2.00e-118	418.00
IUUC-Meu-056777	Macropus eugenii	88.53	2.00e-180	624.00
IUUC-Mpo-057376	Magnaporthe poae	23.20	5.00e-04	40.00
IUUC-Mtr-058142	Medicago truncatula	24.53	5.00e-07	50.10
IUUC-Mga-059716	Meleagris gallopavo	71.99	3.00e-150	524.00
IUUC-Mmr-060649	Microcebus murinus	72.91	1.00e-156	545.00
IUUC-Mdo-062535	Monodelphis domestica	73.46	5.00e-155	540.00
IUUC-Mmu-064036	Mus musculus	72.35	5.00e-155	540.00
IUUC-Mac-065338	Musa acuminata	23.67	1.00e-05	45.40
IUUC-Mpu-065719	Mustela putorius furo	93.12	0.00e+00	733.00
IUUC-Mlu-067219	Myotis lucifugus	91.89	0.00e+00	717.00
IUUC-Nfi-068308	Neosartorya fischeri	19.27	9.00e-05	42.40
IUUC-Ncr-068691	Neurospora crassa	22.73	3.00e-05	43.90
IUUC-Nle-068983	Nomascus leucogenys	74.01	5.00e-158	550.00
IUUC-Opr-070467	Ochotona princeps	93.87	0.00e+00	678.00
IUUC-Ont-071566	Oreochromis niloticus	96.59	0.00e+00	779.00
IUUC-Oan-073368	Ornithorhynchus anatinus	93.60	0.00e+00	673.00
IUUC-Ocu-074854	Oryctolagus cuniculus	73.74	2.00e-159	554.00
IUUC-Ome-081687	Oryza meridionalis	26.32	1.00e-03	38.50
IUUC-Oga-088235	Otolemur garnettii	75.70	9.00e-154	535.00
IUUC-Oar-089547	Ovis aries	92.18	0.00e+00	720.00
IUUC-Ptr-091423	Pan troglodytes	73.46	1.00e-157	548.00
IUUC-Pan-092378	Papio anubis	93.87	0.00e+00	677.00
IUUC-Psi-093638	Pelodiscus sinensis	73.46	3.00e-152	531.00
IUUC-Pma-094384	Petromyzon marinus	63.48	6.00e-49	186.00
IUUC-Pno-095027	Phaeosphaeria nodorum	23.31	4.00e-04	39.70
IUUC-Pfo-096031	Poecilia formosa	94.13	0.00e+00	716.00
IUUC-Pab-097886	Pongo abelii	74.01	5.00e-158	550.00
IUUC-Pop-099430	Populus trichocarpa	24.85	2.00e-06	47.80
IUUC-Pca-101138	Procavia capensis	93.87	0.00e+00	678.00
IUUC-Ppe-101293	Prunus persica	29.67	1.00e-06	48.50
IUUC-Pva-103215	Pteropus vampyrus	73.18	5.00e-158	550.00
IUUC-Pte-104238	Pyrenophora teres	25.64	2.00e-03	37.40
IUUC-Rno-105968	Rattus norvegicus	72.63	3.00e-155	540.00
IUUC-Sha-107595	Sarcophilus harrisii	93.20	0.00e+00	710.00
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.14	5.00e-06	46.20
IUUC-Smo-109552	Selaginella moellendorffii	19.34	3.00e-03	37.70
IUUC-Sly-110873	Solanum lycopersicum	24.84	1.00e-05	45.40
IUUC-Stu-112586	Solanum tuberosum	20.30	6.00e-03	36.20
IUUC-Sar-113076	Sorex araneus	72.96	2.00e-102	365.00
IUUC-Sre-115143	Sporisorium reilianum	18.93	1.00e-03	38.50
IUUC-Ssc-115755	Sus scrofa	93.33	0.00e+00	669.00
IUUC-Tgu-117326	Taeniopygia guttata	75.91	1.00e-150	525.00
IUUC-Tru-117858	Takifugu rubripes	72.39	2.00e-155	541.00
IUUC-Tsy-119296	Tarsius syrichta	66.76	3.00e-138	484.00
IUUC-Tni-119822	Tetraodon nigroviridis	92.37	0.00e+00	650.00
IUUC-Tca-120935	Theobroma cacao	29.67	6.00e-07	49.70
IUUC-Tbe-127366	Tupaia belangeri	92.27	0.00e+00	653.00
IUUC-Ttr-128484	Tursiops truncatus	73.86	2.00e-146	511.00
IUUC-Vpa-130304	Vicugna pacos	70.92	6.00e-118	416.00
IUUC-Vvi-131560	Vitis vinifera	28.57	2.00e-06	47.80
IUUC-Xtr-132062	Xenopus tropicalis	94.93	0.00e+00	680.00
IUUC-Xma-134288	Xiphophorus maculatus	97.54	0.00e+00	778.00
IUUC-Yli-134374	Yarrowia lipolytica	19.47	7.00e-06	45.40
IUUC-Zma-135310	Zea mays	23.16	2.00e-04	41.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence