iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112306

Ensembl Protein ID

PGSC0003DMT400036871

UniProt Accession

M1B4E3; M1B4E3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401014218	PGSC0003DMT400036870	PGSC0003DMT400036870
PGSC0003DMG401014218	PGSC0003DMT400036871	PGSC0003DMT400036871

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.60e-25	89.0	142	183
ULD/UDP/UBQ/UBQ_PIM	1.10e-23	84.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++ql++MG   +d+e++ +aLraa+nn+e+Av+yL++g
   Q: 142  LEQTIQQLMDMGggsWDKETVTRALRAAYNNPERAVDYLYSG 183
           699************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkltvktlkg++fe++v+++dt+ ++K++i++++g   +p+ qq LI++Gk+LkD++tL e++++++ +++++++ksk
   Q: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGkdnYPCGQQLLIHNGKVLKDESTLLENNVSEDGFLVVMLSKSK 78
           99*************************************************************************997 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MKLTVKTLKG SHFEIRVQPS DTIMAVKKNI EDVQGKDNYP CGQQLLIHNG KVLKDESTLL 60
ENNVSEDGFL VVMLSKSKTA SSSGTTSAQQ PATAANPTTT PEVIPPSQVP KDVVSASDAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAACTTGT AAAGCAAAGG AGTAAGAGCC GATCCAGCAT TGGGAGTTTC TAGGGTTTGG 60
TTTTTCTTTC TTGTTGTAAA GCTCTCTTTT TTACTCCTAA TTCGCAGGAT GAAGCTCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sot:102593740

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000088	Aegilops tauschii	55.98	3.00e-96	344.00
IUUC-Atr-002756	Amborella trichopoda	64.43	8.00e-126	442.00
IUUC-Aly-006159	Arabidopsis lyrata	69.92	1.00e-137	481.00
IUUC-Ath-007157	Arabidopsis thaliana	67.65	2.00e-128	451.00
IUUC-Afl-008605	Aspergillus flavus	39.06	2.00e-31	129.00
IUUC-Afu-008877	Aspergillus fumigatus	37.45	3.00e-31	128.00
IUUC-Ani-009460	Aspergillus nidulans	40.82	1.00e-31	129.00
IUUC-Aor-010032	Aspergillus oryzae	39.06	2.00e-31	129.00
IUUC-Ame-011107	Astyanax mexicanus	44.68	1.00e-17	82.80
IUUC-Bgr-012056	Blumeria graminis	33.83	4.00e-34	137.00
IUUC-Bdi-014355	Brachypodium distachyon	61.14	2.00e-117	414.00
IUUC-Bol-015272	Brassica oleracea	64.45	6.00e-129	452.00
IUUC-Bra-016970	Brassica rapa	68.38	5.00e-130	456.00
IUUC-Cel-018364	Caenorhabditis elegans	26.30	3.00e-19	87.80
IUUC-Cho-024814	Choloepus hoffmanni	40.91	4.00e-20	90.90
IUUC-Csv-025823	Ciona savignyi	27.65	2.00e-24	104.00
IUUC-Fox-037960	Fusarium oxysporum	33.42	2.00e-35	142.00
IUUC-Gmo-039080	Gadus morhua	32.04	2.00e-30	125.00
IUUC-Gga-040544	Gallus gallus	31.75	2.00e-38	151.00
IUUC-Gma-044245	Glycine max	71.09	3.00e-142	496.00
IUUC-Kpa-049314	Komagataella pastoris	28.22	4.00e-33	134.00
IUUC-Lpe-051168	Leersia perrieri	62.74	3.00e-117	413.00
IUUC-Mtr-058239	Medicago truncatula	67.27	1.00e-135	474.00
IUUC-Mla-058961	Melampsora laricipopulina	44.12	2.00e-25	108.00
IUUC-Mvi-060220	Microbotryum violaceum	46.03	6.00e-23	100.00
IUUC-Mac-064468	Musa acuminata	66.15	3.00e-126	443.00
IUUC-Mlu-067787	Myotis lucifugus	34.02	1.00e-46	179.00
IUUC-Nfi-068390	Neosartorya fischeri	37.45	3.00e-31	127.00
IUUC-Oan-073572	Ornithorhynchus anatinus	34.00	1.00e-44	172.00
IUUC-Oba-074972	Oryza barthii	61.33	2.00e-115	407.00
IUUC-Obr-076909	Oryza brachyantha	63.54	6.00e-123	432.00
IUUC-Ogl-077067	Oryza glaberrima	62.18	4.00e-123	433.00
IUUC-Ogu-078023	Oryza glumaepatula	59.71	2.00e-104	371.00
IUUC-Oin-079203	Oryza indica	61.82	8.00e-124	435.00
IUUC-Olo-080559	Oryza longistaminata	63.83	5.00e-121	426.00
IUUC-Oni-082812	Oryza nivara	61.07	6.00e-115	405.00
IUUC-Opu-083963	Oryza punctata	61.52	2.00e-109	387.00
IUUC-Oru-084942	Oryza rufipogon	59.49	9.00e-103	365.00
IUUC-Osa-085951	Oryza sativa	62.08	8.00e-124	435.00
IUUC-Olu-087843	Ostreococcus lucimarinus	35.77	3.00e-46	177.00
IUUC-Pno-095064	Phaeosphaeria nodorum	32.70	5.00e-24	103.00
IUUC-Pop-100054	Populus trichocarpa	70.43	1.00e-135	474.00
IUUC-Ppe-101522	Prunus persica	72.41	1.00e-139	488.00
IUUC-Ptt-103717	Puccinia triticina	35.03	9.00e-39	153.00
IUUC-Sce-106214	Saccharomyces cerevisiae	32.03	1.00e-13	69.70
IUUC-Spo-108298	Schizosaccharomyces pombe	35.23	2.00e-43	168.00
IUUC-Smo-109518	Selaginella moellendorffii	57.82	1.00e-97	348.00
IUUC-Sit-109813	Setaria italica	59.07	7.00e-110	389.00
IUUC-Sly-111349	Solanum lycopersicum	96.19	8.00e-167	578.00
IUUC-Sbi-114459	Sorghum bicolor	61.72	1.00e-117	415.00
IUUC-Ssc-115460	Sus scrofa	34.02	6.00e-45	173.00
IUUC-Tsy-118836	Tarsius syrichta	40.91	1.00e-19	89.40
IUUC-Tca-121594	Theobroma cacao	68.16	9.00e-141	491.00
IUUC-Tvi-122617	Trichoderma virens	35.68	3.00e-39	154.00
IUUC-Tae-123231	Triticum aestivum	63.64	4.00e-121	426.00
IUUC-Tur-126144	Triticum urartu	52.88	5.00e-105	373.00
IUUC-Tme-127092	Tuber melanosporum	38.07	8.00e-45	172.00
IUUC-Yli-134615	Yarrowia lipolytica	32.40	3.00e-40	157.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence