iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057981

Ensembl Protein ID

KEH35008

UniProt Accession

A0A072V0W5; A0A072V0W5_MEDTR

Genbank Protein ID

KEH35008.1

Protein Name

Nucleotide-binding protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g075400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g075400	KEH35008	KEH35008

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-26	90.9	307	342
UBD/Beta-Prp	1.00e-48	167.5	212	438

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           gHtd+v++++    s++++vs+++DgtikvWDl +g
   Q: 307  GHTDKVCAVDVskvSSRHVVSSAYDGTIKVWDLLKG 342
           8**********9*866****************9776 PP

UBD/Beta-Prp

   S: 39   vttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           + + ++ ++l+ he++ +a+ f+ +++ l+tg++Dr++kvwd ++g+ ++ l+g   svl+l++  ++ +++++s+ + +  wdl+ g + + tl+gh++ 
   Q: 212  IVPSTCKHRLQAHEGGCAAILFECNSNKLITGGQDRAVKVWDTDSGSLISNLHGCLGSVLDLAITNDNRSVIAASSSNNLYAWDLNLGRVHH-TLTGHTDK 311
           55667899***********************************************************************************9.******** PP
   S: 140  vncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvs 239
           v+ v v++ + + +vs+++D+t+++Wdl  g ++ t     ++  + lsf+ +g+ ++sg  dg ++lwd+++g+ + ++ +h+  v+s+ +s+n++ +++
   Q: 312  VCAVDVSKVSsRHVVSSAYDGTIKVWDLLKGYCINTIIF--HSNCNALSFSTDGQTILSGHVDGNLRLWDIKSGKLLSEVAAHSLAVTSISLSRNGNVVLT 410
           **********9**************************75..8899******************************************************** PP
   S: 240  gssDgsiriWdlrsgdllktlqlhnssv 267
            + D+  +++d+rs ++ +tl+   ++v
   Q: 411  SGRDNLHNLFDMRSLEVSGTLKAAGNRV 438
           ********************99876665 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAKEEIANQA IKHAFRALRK RHLNEEGAHA AAFAALSRPI VSQASEWKEK AESLEMELQQ 60
CYKAQSRVSE QLVVEIAESR TLKSVIQEKE TAVDDLQKEL TSMRDECKQM KKDLEDKINA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCATACCAA AATTTTAGAG AAAATGGGGA AAAGGAGCAA CAAATCACAA ATGAAAAAAT 60
ATAACGGTAA AATTGTTAAA AAAAAAAAAA AACATGTGAA GGCCAAAAAT ACAGTTAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR013923--Autophagy-rel_prot_16
IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08614--ATG16
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_3g075400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002242	Ailuropoda melanoleuca	33.22	2.00e-40	159.00
IUUC-Cpo-022156	Cavia porcellus	33.78	5.00e-44	172.00
IUUC-Loc-052610	Lepisosteus oculatus	33.65	4.00e-47	182.00
IUUC-Ola-086964	Oryzias latipes	35.96	6.00e-41	160.00
IUUC-Oga-088765	Otolemur garnettii	27.82	6.00e-48	184.00
IUUC-Pgr-103597	Puccinia graminis	30.29	7.00e-26	112.00
IUUC-Ssc-116241	Sus scrofa	26.71	3.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence