iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006562

Ensembl Protein ID

scaffold_703472.1

UniProt Accession

D7MHY1; D7MHY1_ARALL

Genbank Protein ID

EFH46718.1

Protein Name

Polyubiquitin

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_915730

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_703472.1	scaffold_703472.1	scaffold_703472.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	9.70e-271	875.5	384	459
ULD/UDP/UBQ/UBQ_PIM	4.00e-185	600.9	232	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 384  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 459
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ +lK+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 232  MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 304
           99********************************************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MVLMQIFART LTEKTITLDA ESSYTINNVK AQIQDKEGIP LDQQRLIFAG KQLEDGRTLA 60
DYNIQKESIL HLALRLRGGM QIFVKTLTGK TITLEVESSD TIDNVKAKIQ DKEGILPDQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGTGTGTT GTTTTTCCAG ATGGTACTGA TGCAAATCTT CGCAAGGACT CTAACAGAAA 60
AAACCATAAC CCTTGATGCT GAAAGTTCCT ACACCATCAA TAACGTCAAG GCACAGATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

aly:ARALYDRAFT_915730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018571	Caenorhabditis elegans	92.29	0.00e+00	978.00
IUUC-Csv-026265	Ciona savignyi	90.98	0.00e+00	972.00
IUUC-Dre-028641	Danio rerio	92.50	0.00e+00	978.00
IUUC-Dme-031690	Drosophila melanogaster	92.48	0.00e+00	977.00
IUUC-Gac-042568	Gasterosteus aculeatus	92.13	0.00e+00	972.00
IUUC-Gma-043881	Glycine max	96.24	0.00e+00	1006.00
IUUC-Hsa-046405	Homo sapiens	92.48	0.00e+00	976.00
IUUC-Mcc-055561	Macaca mulatta	92.48	0.00e+00	977.00
IUUC-Mtr-058675	Medicago truncatula	96.24	0.00e+00	1007.00
IUUC-Mla-058957	Melampsora laricipopulina	95.69	0.00e+00	1006.00
IUUC-Mdo-062630	Monodelphis domestica	92.48	0.00e+00	976.00
IUUC-Mmu-063593	Mus musculus	92.48	0.00e+00	978.00
IUUC-Ogu-078628	Oryza glumaepatula	45.22	9.00e-57	213.00
IUUC-Oin-079920	Oryza indica	96.24	0.00e+00	1007.00
IUUC-Olo-080418	Oryza longistaminata	34.78	2.00e-31	129.00
IUUC-Opu-083917	Oryza punctata	35.22	4.00e-30	125.00
IUUC-Osa-085789	Oryza sativa	95.70	0.00e+00	1008.00
IUUC-Ola-087192	Oryzias latipes	91.40	0.00e+00	947.00
IUUC-Oar-089386	Ovis aries	87.60	0.00e+00	899.00
IUUC-Ppa-095548	Physcomitrella patens	94.92	0.00e+00	993.00
IUUC-Pab-097884	Pongo abelii	92.48	0.00e+00	975.00
IUUC-Pgr-103301	Puccinia graminis	96.24	0.00e+00	1007.00
IUUC-Rno-105199	Rattus norvegicus	92.48	0.00e+00	978.00
IUUC-Smo-109259	Selaginella moellendorffii	94.92	0.00e+00	994.00
IUUC-Sit-109965	Setaria italica	96.24	0.00e+00	1007.00
IUUC-Sly-111224	Solanum lycopersicum	95.88	0.00e+00	1008.00
IUUC-Stu-112256	Solanum tuberosum	96.07	0.00e+00	1010.00
IUUC-Sre-114908	Sporisorium reilianum	89.77	6.00e-41	158.00
IUUC-Ssc-115672	Sus scrofa	92.11	0.00e+00	972.00
IUUC-Tur-126025	Triticum urartu	96.24	0.00e+00	1014.00
IUUC-Vvi-130874	Vitis vinifera	96.24	0.00e+00	1006.00
IUUC-Xtr-132052	Xenopus tropicalis	92.11	0.00e+00	969.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence