iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018360

Ensembl Protein ID

F38G1.1.1

UniProt Accession

G5EGF0; G5EGF0_CAEEL

Genbank Protein ID

CAB38019.1; CCD61758.1

Protein Name

CHE-2 protein

Genbank Nucleotide ID

AJ011523; BX284606

Gene Name

che-2; CELE_F38G1.1; F38G1.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00000484	F38G1.1.1	F38G1.1.1

Annotation

mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-13	48.5	185	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H + + c+++ ++ +l+v+G+ D + kvWD
   Q: 185  HDGIILCCDWnPTsDLIVTGGEDLKFKVWD 214
           9999*******777**************** PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MKLKLSASRK TRHTEMVCGV GWIGTEAILS AADDHVFLLT NTATNESQQI LNMPETFFPT 60
SLHIFPRSQT KGGQNDVFAV STSDGKINIL SRNGKVENMV DAHNGAALCA RWNSDGTGLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTCGTTAA TGAACCCTCA GAGATTTGGG CTAATCAATT ATTTTCTACA ATTCAGGCTT 60
TCAACTTTGC AGAATGAAAT TAAAACTATC GGCGTCTCGG AAAACACGCC ACACAGAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0030992--C:intraciliary transport particle B
GO:0097730--C:non-motile cilium
GO:0005198--F:structural molecule activity
GO:0006935--P:chemotaxis
GO:0043327--P:chemotaxis to cAMP
GO:0060271--P:cilium assembly
GO:0040024--P:dauer larval development
GO:0009593--P:detection of chemical stimulus
GO:0030512--P:negative regulation of transforming growth factor beta receptor signaling pathway
GO:0040018--P:positive regulation of multicellular organism growth
GO:0040014--P:regulation of multicellular organism growth
GO:0010035--P:response to inorganic substance

KEGG

cel:CELE_F38G1.1

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001564	Ailuropoda melanoleuca	43.92	8.00e-118	415.00
IUUC-Apl-003721	Anas platyrhynchos	42.67	0.00e+00	668.00
IUUC-Aca-004488	Anolis carolinensis	42.70	0.00e+00	682.00
IUUC-Ame-011402	Astyanax mexicanus	44.09	4.00e-124	436.00
IUUC-Bta-013037	Bos taurus	36.23	7.00e-158	549.00
IUUC-Cja-019076	Callithrix jacchus	40.59	2.00e-153	535.00
IUUC-Cfa-020999	Canis familiaris	40.94	0.00e+00	646.00
IUUC-Cpo-021333	Cavia porcellus	37.66	1.00e-155	542.00
IUUC-Cre-022899	Chlamydomonas reinhardtii	34.94	1.00e-135	475.00
IUUC-Csa-023699	Chlorocebus sabaeus	41.04	0.00e+00	659.00
IUUC-Cho-024904	Choloepus hoffmanni	39.82	9.00e-106	376.00
IUUC-Cin-025399	Ciona intestinalis	41.00	0.00e+00	646.00
IUUC-Csv-026186	Ciona savignyi	40.18	0.00e+00	625.00
IUUC-Cne-026946	Cryptococcus neoformans	31.50	4.00e-10	58.90
IUUC-Dre-028276	Danio rerio	40.26	0.00e+00	655.00
IUUC-Dno-029824	Dasypus novemcinctus	40.78	0.00e+00	655.00
IUUC-Dor-031141	Dipodomys ordii	39.47	8.00e-174	602.00
IUUC-Dme-031620	Drosophila melanogaster	30.40	3.00e-110	391.00
IUUC-Ete-033028	Echinops telfairi	48.55	9.00e-50	191.00
IUUC-Eca-033339	Equus caballus	40.66	0.00e+00	644.00
IUUC-Eeu-034909	Erinaceus europaeus	37.52	2.00e-110	392.00
IUUC-Fca-035780	Felis catus	41.18	0.00e+00	641.00
IUUC-Fal-037447	Ficedula albicollis	39.05	5.00e-172	596.00
IUUC-Gmo-038657	Gadus morhua	35.69	2.00e-122	432.00
IUUC-Gga-040689	Gallus gallus	43.24	0.00e+00	678.00
IUUC-Gac-041586	Gasterosteus aculeatus	39.31	3.00e-149	521.00
IUUC-Hsa-047005	Homo sapiens	41.05	0.00e+00	670.00
IUUC-Itr-048757	Ictidomys tridecemlineatus	41.21	4.00e-138	483.00
IUUC-Lch-050459	Latimeria chalumnae	41.30	0.00e+00	664.00
IUUC-Loc-052774	Lepisosteus oculatus	40.78	6.00e-153	533.00
IUUC-Laf-053765	Loxodonta africana	40.88	0.00e+00	629.00
IUUC-Mcc-055052	Macaca mulatta	41.04	0.00e+00	659.00
IUUC-Meu-056368	Macropus eugenii	34.34	2.00e-149	521.00
IUUC-Mga-059488	Meleagris gallopavo	43.18	0.00e+00	679.00
IUUC-Mmr-061527	Microcebus murinus	40.42	0.00e+00	655.00
IUUC-Mdo-062850	Monodelphis domestica	39.90	1.00e-147	516.00
IUUC-Mmu-063117	Mus musculus	40.92	0.00e+00	647.00
IUUC-Mpu-066550	Mustela putorius furo	41.46	2.00e-176	611.00
IUUC-Mlu-067772	Myotis lucifugus	40.56	4.00e-178	617.00
IUUC-Nle-069215	Nomascus leucogenys	40.79	0.00e+00	660.00
IUUC-Opr-070725	Ochotona princeps	34.26	5.00e-131	460.00
IUUC-Ont-072147	Oreochromis niloticus	40.58	0.00e+00	656.00
IUUC-Oan-073176	Ornithorhynchus anatinus	50.42	5.00e-33	131.00
IUUC-Ocu-073896	Oryctolagus cuniculus	40.39	4.00e-147	514.00
IUUC-Ola-086767	Oryzias latipes	38.66	3.00e-143	501.00
IUUC-Oga-088113	Otolemur garnettii	41.44	0.00e+00	661.00
IUUC-Oar-089683	Ovis aries	39.97	0.00e+00	634.00
IUUC-Ptr-091563	Pan troglodytes	41.05	0.00e+00	669.00
IUUC-Pan-092042	Papio anubis	40.91	0.00e+00	657.00
IUUC-Psi-093306	Pelodiscus sinensis	43.16	0.00e+00	690.00
IUUC-Ppa-095694	Physcomitrella patens	33.42	1.00e-135	475.00
IUUC-Pfo-096800	Poecilia formosa	40.39	0.00e+00	635.00
IUUC-Pab-098356	Pongo abelii	40.92	0.00e+00	664.00
IUUC-Pva-102246	Pteropus vampyrus	40.96	4.00e-172	597.00
IUUC-Rno-105195	Rattus norvegicus	40.13	0.00e+00	638.00
IUUC-Sha-107056	Sarcophilus harrisii	40.34	0.00e+00	643.00
IUUC-Smo-109240	Selaginella moellendorffii	34.60	7.00e-121	426.00
IUUC-Sar-113301	Sorex araneus	35.71	2.00e-57	216.00
IUUC-Ssc-116040	Sus scrofa	48.82	2.00e-71	261.00
IUUC-Tgu-117127	Taeniopygia guttata	42.19	0.00e+00	662.00
IUUC-Tru-118663	Takifugu rubripes	39.03	0.00e+00	636.00
IUUC-Tsy-119207	Tarsius syrichta	36.06	1.00e-159	555.00
IUUC-Tni-120705	Tetraodon nigroviridis	39.45	0.00e+00	636.00
IUUC-Tbe-127434	Tupaia belangeri	39.55	2.00e-115	408.00
IUUC-Ttr-128937	Tursiops truncatus	41.05	0.00e+00	649.00
IUUC-Vpa-130518	Vicugna pacos	39.08	9.00e-170	589.00
IUUC-Xtr-131879	Xenopus tropicalis	42.63	0.00e+00	666.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence