iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049560

Ensembl Protein ID

ENSLACP00000010539.1

UniProt Accession

H3ALL8; H3ALL8_LATCH

Genbank Protein ID

ENSLACP00000010539

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01201816

Gene Name

RHBDD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000009286.1	ENSLACT00000010618.1	ENSLACP00000010539.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	35.39	9.00e-15	79.00	IUUC-Hsa-046646
UBD/Alpha-Helix/UBA	34.45	4.00e-14	76.60	IUUC-Mmu-063304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MRLTGRFFSM IYGGHKVPVG TFSCILLICI LWLTDANESM ALKPDMVLQH FQVPTVHRLL 60
TYGLCHSDLF SLLLNVLMLF LLGRQHEWQL GTITFLYLTL FCTALPAVLY ILVAKLLSFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTACAATC CGCAACACGC AGGGAAATAA GATTTAGATA TCTGTGTCAA TTATGAATGT 60
TAATGAAAGA GACTCTAGTT TGATCTTAGG CTGCGGGACT GCTAGGTTTA TTCTACGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR009060--UBA-like

Pfam

PF01694--Rhomboid

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001619	Ailuropoda melanoleuca	39.38	8.00e-14	71.20
IUUC-Atr-003104	Amborella trichopoda	26.23	2.00e-04	41.20
IUUC-Aca-004494	Anolis carolinensis	34.45	5.00e-24	105.00
IUUC-Ath-006650	Arabidopsis thaliana	28.42	4.60e-02	32.30
IUUC-Afl-008583	Aspergillus flavus	32.20	8.00e-04	37.40
IUUC-Ame-010805	Astyanax mexicanus	34.59	8.00e-29	120.00
IUUC-Bta-012844	Bos taurus	55.93	4.00e-11	62.00
IUUC-Bdi-014166	Brachypodium distachyon	26.65	1.00e-06	47.00
IUUC-Bol-015488	Brassica oleracea	29.51	7.00e-09	55.50
IUUC-Bra-017302	Brassica rapa	29.51	1.00e-08	53.90
IUUC-Cja-019853	Callithrix jacchus	36.50	5.00e-12	65.50
IUUC-Cfa-021026	Canis familiaris	40.41	3.00e-26	112.00
IUUC-Csa-023360	Chlorocebus sabaeus	51.14	2.00e-16	79.70
IUUC-Dre-027575	Danio rerio	34.20	2.00e-34	139.00
IUUC-Dno-029113	Dasypus novemcinctus	36.45	5.00e-12	65.50
IUUC-Dor-030646	Dipodomys ordii	34.75	9.00e-22	97.40
IUUC-Eca-034158	Equus caballus	36.80	5.00e-22	98.60
IUUC-Eeu-034983	Erinaceus europaeus	36.70	3.00e-18	84.70
IUUC-Fca-035531	Felis catus	39.69	6.00e-25	108.00
IUUC-Fox-037841	Fusarium oxysporum	26.12	4.60e-02	31.60
IUUC-Fso-038300	Fusarium solani	28.31	1.00e-02	33.10
IUUC-Gma-043194	Glycine max	28.42	5.00e-07	48.50
IUUC-Ggo-045015	Gorilla gorilla	52.27	8.00e-17	81.30
IUUC-Hsa-046646	Homo sapiens	37.50	4.00e-17	82.00
IUUC-Hvu-047778	Hordeum vulgare	31.00	1.00e-05	44.30
IUUC-Itr-048164	Ictidomys tridecemlineatus	38.10	2.00e-19	90.10
IUUC-Lpe-051525	Leersia perrieri	25.54	9.00e-07	47.80
IUUC-Loc-052194	Lepisosteus oculatus	29.69	7.00e-07	48.10
IUUC-Laf-054308	Loxodonta africana	36.87	6.00e-20	91.70
IUUC-Mcc-055034	Macaca mulatta	51.14	1.00e-16	80.10
IUUC-Meu-056317	Macropus eugenii	38.07	5.00e-16	78.20
IUUC-Mtr-058025	Medicago truncatula	23.75	5.00e-07	48.90
IUUC-Mmr-061591	Microcebus murinus	37.50	1.00e-10	60.50
IUUC-Mdo-062745	Monodelphis domestica	50.48	1.00e-20	93.60
IUUC-Mmu-063304	Mus musculus	36.45	7.00e-19	88.20
IUUC-Mac-064802	Musa acuminata	27.11	2.00e-07	50.10
IUUC-Mpu-066394	Mustela putorius furo	40.00	1.00e-24	107.00
IUUC-Mlu-067595	Myotis lucifugus	35.14	2.00e-21	96.30
IUUC-Nle-069211	Nomascus leucogenys	36.00	2.00e-19	90.10
IUUC-Opr-070249	Ochotona princeps	36.22	1.00e-18	86.30
IUUC-Oan-073402	Ornithorhynchus anatinus	43.75	1.60e-01	28.90
IUUC-Ocu-074418	Oryctolagus cuniculus	39.49	7.00e-21	94.40
IUUC-Oba-075871	Oryza barthii	24.64	6.00e-02	32.00
IUUC-Obr-076568	Oryza brachyantha	25.07	8.00e-09	54.70
IUUC-Ogl-077534	Oryza glaberrima	26.58	3.00e-03	36.60
IUUC-Ogu-078204	Oryza glumaepatula	24.04	9.50e-02	31.20
IUUC-Oin-079209	Oryza indica	26.58	3.00e-03	36.60
IUUC-Opu-083685	Oryza punctata	29.59	3.00e-04	39.30
IUUC-Osa-086297	Oryza sativa	26.58	3.00e-03	36.60
IUUC-Ola-087450	Oryzias latipes	63.86	1.00e-22	99.40
IUUC-Oga-088214	Otolemur garnettii	38.66	3.00e-28	119.00
IUUC-Oar-089324	Ovis aries	57.89	1.00e-08	53.50
IUUC-Ptr-091322	Pan troglodytes	52.27	8.00e-17	80.50
IUUC-Pan-092490	Papio anubis	36.00	5.00e-20	92.00
IUUC-Ppa-095438	Physcomitrella patens	26.05	1.00e-06	47.80
IUUC-Pfo-097125	Poecilia formosa	69.86	3.00e-21	95.50
IUUC-Pop-099200	Populus trichocarpa	27.75	3.00e-04	39.70
IUUC-Ppe-101907	Prunus persica	23.56	1.00e-06	47.80
IUUC-Pva-102615	Pteropus vampyrus	36.89	1.00e-26	113.00
IUUC-Rno-105844	Rattus norvegicus	34.20	3.00e-18	86.30
IUUC-Sha-107118	Sarcophilus harrisii	37.27	4.00e-15	75.10
IUUC-Smo-109633	Selaginella moellendorffii	28.21	2.00e-05	43.10
IUUC-Sit-110586	Setaria italica	24.73	1.00e-10	60.50
IUUC-Sly-111682	Solanum lycopersicum	25.60	1.00e-04	40.80
IUUC-Stu-112146	Solanum tuberosum	25.33	2.00e-03	36.60
IUUC-Sbi-114385	Sorghum bicolor	26.30	1.00e-08	53.90
IUUC-Ssc-115786	Sus scrofa	36.60	1.00e-25	110.00
IUUC-Tca-120985	Theobroma cacao	24.02	3.00e-09	56.20
IUUC-Tae-125486	Triticum aestivum	31.00	5.00e-06	45.40
IUUC-Tur-126741	Triticum urartu	30.00	2.00e-04	40.00
IUUC-Ttr-128407	Tursiops truncatus	33.24	3.00e-11	62.40
IUUC-Vvi-131200	Vitis vinifera	26.49	4.00e-07	48.90
IUUC-Xtr-131878	Xenopus tropicalis	33.18	2.00e-17	83.20
IUUC-Xma-133198	Xiphophorus maculatus	67.50	7.00e-24	104.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence