iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098962

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000355

Gene Name

POPTRDRAFT_249884; POPTR_0019s12120g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s12120	POPTR_0019s12120.1	POPTR_0019s12120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-08	34.8	84	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++++d+   ++lp C+H fha+C+ kw       s + +CP+Cr
   Q: 84   CAVCLSMLEDQemARILPnCKHKFHAECIDKW------LSSHSTCPICR 126
           ********77666889999*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLTAILSLSF VVVLVIVLHI YARCALRRHQ ARRRAVMNSL GLTNASVNSG EPPKRGLDPT 60
VIASLPIFVY QQTEGQAEDD LIECAVCLSM LEDQEMARIL PNCKHKFHAE CIDKWLSSHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGATTATG CTCACTGCAA TTCTATCATT ATCCTTTGTT GTTGTGCTTG TTATAGTTCT 60
TCATATTTAT GCAAGATGTG CTCTAAGGCG TCATCAAGCC CGTCGCCGCG CTGTCATGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0019s12120g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000503	Aegilops tauschii	48.84	4.00e-20	90.90
IUUC-Aml-001752	Ailuropoda melanoleuca	41.49	5.00e-16	78.60
IUUC-Aca-005355	Anolis carolinensis	41.49	4.00e-16	79.00
IUUC-Aly-005547	Arabidopsis lyrata	48.02	4.00e-35	140.00
IUUC-Ath-007071	Arabidopsis thaliana	50.90	2.00e-33	135.00
IUUC-Acl-008256	Aspergillus clavatus	35.19	2.00e-10	59.70
IUUC-Ame-011569	Astyanax mexicanus	42.39	2.00e-16	79.70
IUUC-Bdi-014715	Brachypodium distachyon	49.47	1.00e-22	99.40
IUUC-Bol-016381	Brassica oleracea	48.09	3.00e-28	117.00
IUUC-Bra-016906	Brassica rapa	42.47	1.00e-28	119.00
IUUC-Cfa-020501	Canis familiaris	41.49	5.00e-16	78.60
IUUC-Dno-029482	Dasypus novemcinctus	41.49	6.00e-16	78.60
IUUC-Dor-030261	Dipodomys ordii	41.57	8.00e-16	77.80
IUUC-Eca-033264	Equus caballus	41.49	4.00e-16	78.60
IUUC-Fal-037568	Ficedula albicollis	41.49	5.00e-16	78.60
IUUC-Gga-040685	Gallus gallus	41.49	4.00e-16	79.00
IUUC-Gac-042255	Gasterosteus aculeatus	41.49	2.00e-16	79.70
IUUC-Gma-044362	Glycine max	51.08	5.00e-32	130.00
IUUC-Ggo-044571	Gorilla gorilla	41.49	5.00e-16	78.60
IUUC-Hsa-046118	Homo sapiens	41.49	5.00e-16	78.60
IUUC-Hvu-047609	Hordeum vulgare	58.57	2.00e-21	95.50
IUUC-Itr-048953	Ictidomys tridecemlineatus	41.49	5.00e-16	78.60
IUUC-Lpe-051726	Leersia perrieri	57.33	1.00e-21	96.30
IUUC-Loc-052302	Lepisosteus oculatus	42.39	3.00e-16	79.30
IUUC-Mcc-055576	Macaca mulatta	41.49	5.00e-16	78.60
IUUC-Mtr-057636	Medicago truncatula	45.85	7.00e-30	123.00
IUUC-Mga-059597	Meleagris gallopavo	40.43	2.00e-14	73.20
IUUC-Mmu-064200	Mus musculus	41.49	5.00e-16	78.20
IUUC-Mac-064688	Musa acuminata	59.26	2.00e-24	106.00
IUUC-Ont-072311	Oreochromis niloticus	41.49	1.00e-15	77.40
IUUC-Opu-083718	Oryza punctata	60.56	9.00e-22	95.90
IUUC-Oru-084452	Oryza rufipogon	39.66	2.00e-24	105.00
IUUC-Osa-085457	Oryza sativa	39.66	1.00e-24	105.00
IUUC-Oar-090272	Ovis aries	41.49	7.00e-16	78.20
IUUC-Ptr-091566	Pan troglodytes	41.49	5.00e-16	78.60
IUUC-Pan-091884	Papio anubis	41.49	6.00e-16	78.60
IUUC-Pfo-096604	Poecilia formosa	41.49	5.00e-16	79.30
IUUC-Ppe-101543	Prunus persica	58.18	1.00e-46	179.00
IUUC-Rno-105006	Rattus norvegicus	41.49	5.00e-16	78.20
IUUC-Sly-111815	Solanum lycopersicum	50.38	3.00e-28	116.00
IUUC-Stu-112253	Solanum tuberosum	55.00	2.00e-51	194.00
IUUC-Sbi-113770	Sorghum bicolor	51.19	7.00e-23	100.00
IUUC-Tgu-117480	Taeniopygia guttata	41.49	3.00e-16	79.00
IUUC-Tru-118277	Takifugu rubripes	41.49	8.00e-16	77.80
IUUC-Tca-121159	Theobroma cacao	51.01	4.00e-38	150.00
IUUC-Tae-125074	Triticum aestivum	35.40	1.00e-22	99.80
IUUC-Tbe-127237	Tupaia belangeri	41.49	6.00e-16	78.60
IUUC-Vpa-130240	Vicugna pacos	41.49	5.00e-16	78.60
IUUC-Vvi-130902	Vitis vinifera	58.14	2.00e-36	144.00
IUUC-Xtr-132852	Xenopus tropicalis	43.48	9.00e-17	80.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence