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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105998
UUCD1 version UUC-RaN-00115
Ensembl Protein ID ENSRNOP00000013344.4
UniProt Accession D3ZXM0; D3ZXM0_RAT
Genbank Protein ID EDM16396.1
Protein Name Ring finger protein (C3HC4 type) 19 (Predicted); Ring finger protein 19A, RBR E3 ubiquitin protein ligase
Genbank Nucleotide ID AABR07057510
Gene Name Rnf19a; Rnf19_predicted; rCG_59993
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000009658.5 ENSRNOT00000013344.5 ENSRNOP00000013344.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
miRNAMapRAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RBR 1.00e-52 179.6 132 332
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RBR
   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqvteiscpaaecpekleeseikellveeelykryekllleevveadaalkw 90
           C++Cll++s+++++ +++C+h+ C +Cl+qyl+++i+e++ ++iscp  ec+e++++++i+ +l+++ l+++ye+++l++++ ad++++w
   Q: 132  CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESR-VNISCP--ECTERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRW 218
           ****************************************.9*****..89*************************************** PP
   S: 91   cpapdCslvvllekea..eklevecekcgkefCveCkeewHeglsCkelkeklakteeek.......eeaeskelleanskkCpkCkvyi 171
           cpapdC ++v++  +a  +kl++ +e+cg+efC++Ck++wH++++C+++++++a++ + +       + ++++ ++++++k+Cp+C +yi
   Q: 219  CPAPDCGYAVIAFGCAscPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQERAQSLRLRtirsssiSYSQESGAAADDIKPCPRCAAYI 308
           *************999889************************************99998999*99999999****************** PP
   S: 172  ek..negCnhmtCakCkaefCwlC 193
           +k  +++CnhmtCa C++efCwlC
   Q: 309  IKmnDGSCNHMTCAVCGCEFCWLC 332
           *997889***************** PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MQEQEISFIF KYNEGLCMNI DSDSVLMSIL DMSLHQQMGS DRDLQSSASS VSLPSVKKAP 60
KKRRISIGSL FRRKKDNKRK SRELTGGVDG IASIESIRSE VCAEKNSIFS TNASSDNGLT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105998|E3,RBR|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGCCCGCAAC CGTTCCACCG GCAGCTCTCT CCCTAGCTGA GAAGGTTCCG CGGCGGTGCT 60
GAAGAGCCGT CCTCCGTTCT TCCTCCGCGT TTTGCCTCCG CGGGATGGGC CTGCTCACCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105998|E3,RBR|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50089--ZF_RING_2
Pfam

PF01485--IBR
SMART

SM00647--IBR
SM00184--RING
Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0016021--C:integral component of membrane
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
KEGG rno:362900
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001958 Ailuropoda melanoleuca 92.74 0.00e+00 1342.00
IUUC-Apl-003427 Anas platyrhynchos 87.10 0.00e+00 1128.00
IUUC-Aca-004252 Anolis carolinensis 85.09 0.00e+00 1107.00
IUUC-Ame-011434 Astyanax mexicanus 75.33 0.00e+00 889.00
IUUC-Bta-013558 Bos taurus 92.62 0.00e+00 1345.00
IUUC-Cel-018626 Caenorhabditis elegans 55.22 2.00e-111 396.00
IUUC-Cja-019070 Callithrix jacchus 92.98 0.00e+00 1345.00
IUUC-Cfa-020286 Canis familiaris 92.26 0.00e+00 1336.00
IUUC-Cpo-022015 Cavia porcellus 92.14 0.00e+00 1323.00
IUUC-Csa-023975 Chlorocebus sabaeus 92.62 0.00e+00 1320.00
IUUC-Cho-024442 Choloepus hoffmanni 78.33 0.00e+00 1112.00
IUUC-Cin-025143 Ciona intestinalis 55.41 1.00e-43 169.00
IUUC-Dre-028422 Danio rerio 73.80 0.00e+00 890.00
IUUC-Dno-029018 Dasypus novemcinctus 92.02 0.00e+00 1229.00
IUUC-Dor-030548 Dipodomys ordii 87.13 8.00e-172 597.00
IUUC-Ete-033008 Echinops telfairi 83.79 5.00e-123 434.00
IUUC-Eca-034249 Equus caballus 92.49 0.00e+00 1341.00
IUUC-Eeu-035298 Erinaceus europaeus 95.71 0.00e+00 829.00
IUUC-Fca-035912 Felis catus 92.38 0.00e+00 1339.00
IUUC-Fal-037488 Ficedula albicollis 83.91 0.00e+00 1100.00
IUUC-Gmo-038893 Gadus morhua 81.89 0.00e+00 807.00
IUUC-Gga-040380 Gallus gallus 86.16 0.00e+00 1092.00
IUUC-Gac-041421 Gasterosteus aculeatus 76.69 0.00e+00 900.00
IUUC-Ggo-044893 Gorilla gorilla 92.98 0.00e+00 1342.00
IUUC-Hsa-046876 Homo sapiens 92.86 0.00e+00 1341.00
IUUC-Itr-048257 Ictidomys tridecemlineatus 93.21 0.00e+00 1347.00
IUUC-Lch-049774 Latimeria chalumnae 83.33 0.00e+00 1113.00
IUUC-Loc-052040 Lepisosteus oculatus 77.40 0.00e+00 983.00
IUUC-Laf-053874 Loxodonta africana 92.26 0.00e+00 1308.00
IUUC-Mcc-054817 Macaca mulatta 92.89 5.00e-106 376.00
IUUC-Meu-056648 Macropus eugenii 88.77 7.00e-171 594.00
IUUC-Mla-059062 Melampsora laricipopulina 24.59 1.00e-09 57.80
IUUC-Mga-060175 Meleagris gallopavo 84.56 0.00e+00 1121.00
IUUC-Mmr-060800 Microcebus murinus 93.21 0.00e+00 1347.00
IUUC-Mdo-061827 Monodelphis domestica 84.93 0.00e+00 1092.00
IUUC-Mmu-064134 Mus musculus 96.43 0.00e+00 1351.00
IUUC-Mpu-066076 Mustela putorius furo 92.38 0.00e+00 1334.00
IUUC-Mlu-068218 Myotis lucifugus 91.90 0.00e+00 1263.00
IUUC-Nle-069707 Nomascus leucogenys 95.72 0.00e+00 1089.00
IUUC-Opr-070977 Ochotona princeps 92.47 0.00e+00 1310.00
IUUC-Ont-072373 Oreochromis niloticus 78.21 0.00e+00 927.00
IUUC-Oan-073376 Ornithorhynchus anatinus 88.10 4.00e-169 587.00
IUUC-Ocu-074878 Oryctolagus cuniculus 91.55 0.00e+00 1273.00
IUUC-Ola-086472 Oryzias latipes 78.54 0.00e+00 949.00
IUUC-Oga-088377 Otolemur garnettii 92.59 0.00e+00 1310.00
IUUC-Oar-089540 Ovis aries 92.26 0.00e+00 1338.00
IUUC-Ptr-090613 Pan troglodytes 92.86 0.00e+00 1341.00
IUUC-Pan-092879 Papio anubis 92.86 0.00e+00 1320.00
IUUC-Psi-093201 Pelodiscus sinensis 87.03 0.00e+00 1110.00
IUUC-Pma-094620 Petromyzon marinus 69.98 0.00e+00 816.00
IUUC-Pfo-096615 Poecilia formosa 83.99 0.00e+00 898.00
IUUC-Pca-100625 Procavia capensis 90.08 0.00e+00 1292.00
IUUC-Pva-103110 Pteropus vampyrus 84.66 0.00e+00 1062.00
IUUC-Sha-107523 Sarcophilus harrisii 84.66 0.00e+00 1097.00
IUUC-Sar-113089 Sorex araneus 90.24 0.00e+00 916.00
IUUC-Ssc-115471 Sus scrofa 92.14 0.00e+00 1280.00
IUUC-Tgu-117080 Taeniopygia guttata 85.71 0.00e+00 1134.00
IUUC-Tru-117547 Takifugu rubripes 78.42 0.00e+00 881.00
IUUC-Tsy-119143 Tarsius syrichta 92.62 0.00e+00 1332.00
IUUC-Tni-119693 Tetraodon nigroviridis 77.34 0.00e+00 874.00
IUUC-Tbe-127335 Tupaia belangeri 72.58 4.00e-143 501.00
IUUC-Ttr-129175 Tursiops truncatus 92.02 0.00e+00 1319.00
IUUC-Vpa-130594 Vicugna pacos 86.26 0.00e+00 1246.00
IUUC-Xtr-132579 Xenopus tropicalis 86.03 0.00e+00 1127.00
Created Date 25-Jun-2017

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