iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-068207

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02027751

Gene Name

LNX1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000006515.2	ENSMLUT00000006513.2	ENSMLUP00000005948.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	88.30	0.00e+00	1241.00	IUUC-Hsa-046470
E3 activity/RING/RING	86.31	0.00e+00	1217.00	IUUC-Mmu-063364
E3 activity/RING/RING	58.73	0.00e+00	823.00	IUUC-Dre-028841

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MSQSDPADDP DPSPEPLCVV CGQAHSPEEN HFYTYTEDVD DDLICHICLQ ALLDPLDTPC 60
GHTYCTVCLT NFLVSKDFCP LDRQPLVLQH CKKSSILVHK LLNKLTVTCP FAEHCAEVLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCATGAGAG CTGCGGGGCT GCTGCTTTGA GAGGCCGGGC AGACACTTAC AAAGGTGAGC 60
TGAAACCCTC CATTTTCCTC TCTCAGCATT TAGACCCCTG GCCCCAAGGG ATCTGAATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001478--PDZ
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50106--PDZ
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00595--PDZ

SMART

SM00228--PDZ
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051260--P:protein homooligomerization
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002005	Ailuropoda melanoleuca	85.79	0.00e+00	1186.00
IUUC-Apl-003561	Anas platyrhynchos	73.37	0.00e+00	1025.00
IUUC-Aca-005346	Anolis carolinensis	72.22	0.00e+00	1040.00
IUUC-Bta-012970	Bos taurus	86.73	0.00e+00	1217.00
IUUC-Cja-019412	Callithrix jacchus	87.88	0.00e+00	1240.00
IUUC-Cfa-020735	Canis familiaris	87.02	0.00e+00	1263.00
IUUC-Cpo-022198	Cavia porcellus	75.24	0.00e+00	1028.00
IUUC-Dre-028841	Danio rerio	48.82	2.00e-27	114.00
IUUC-Dno-028889	Dasypus novemcinctus	86.55	0.00e+00	1280.00
IUUC-Dor-030810	Dipodomys ordii	76.69	0.00e+00	912.00
IUUC-Fca-036264	Felis catus	87.47	0.00e+00	1204.00
IUUC-Fal-037198	Ficedula albicollis	73.16	0.00e+00	1077.00
IUUC-Gga-040766	Gallus gallus	68.01	0.00e+00	1024.00
IUUC-Ggo-045057	Gorilla gorilla	87.88	0.00e+00	1258.00
IUUC-Hsa-046470	Homo sapiens	88.30	0.00e+00	1285.00
IUUC-Itr-048393	Ictidomys tridecemlineatus	88.67	0.00e+00	1290.00
IUUC-Lch-050081	Latimeria chalumnae	64.03	0.00e+00	934.00
IUUC-Loc-052884	Lepisosteus oculatus	59.95	0.00e+00	887.00
IUUC-Laf-054498	Loxodonta africana	86.34	0.00e+00	1253.00
IUUC-Meu-056401	Macropus eugenii	53.94	2.00e-142	499.00
IUUC-Mla-059113	Melampsora laricipopulina	33.67	1.00e-09	57.80
IUUC-Mga-059504	Meleagris gallopavo	71.71	0.00e+00	1050.00
IUUC-Mmr-060696	Microcebus murinus	61.43	0.00e+00	763.00
IUUC-Mdo-062731	Monodelphis domestica	79.39	0.00e+00	1174.00
IUUC-Mmu-063364	Mus musculus	86.31	0.00e+00	1254.00
IUUC-Mpu-066626	Mustela putorius furo	87.17	0.00e+00	1233.00
IUUC-Nle-069304	Nomascus leucogenys	88.44	0.00e+00	1289.00
IUUC-Opr-071080	Ochotona princeps	72.01	0.00e+00	1039.00
IUUC-Ont-072002	Oreochromis niloticus	58.01	0.00e+00	796.00
IUUC-Ola-086477	Oryzias latipes	57.62	0.00e+00	830.00
IUUC-Oga-089142	Otolemur garnettii	85.10	0.00e+00	1202.00
IUUC-Oar-090359	Ovis aries	86.75	0.00e+00	1215.00
IUUC-Ptr-090797	Pan troglodytes	88.16	0.00e+00	1283.00
IUUC-Pan-091910	Papio anubis	88.16	0.00e+00	1279.00
IUUC-Psi-093386	Pelodiscus sinensis	73.12	0.00e+00	1043.00
IUUC-Pfo-096370	Poecilia formosa	58.47	0.00e+00	801.00
IUUC-Pab-097761	Pongo abelii	88.31	0.00e+00	999.00
IUUC-Pva-102443	Pteropus vampyrus	87.37	0.00e+00	972.00
IUUC-Rno-106030	Rattus norvegicus	85.75	0.00e+00	1239.00
IUUC-Sha-107609	Sarcophilus harrisii	78.75	0.00e+00	1154.00
IUUC-Ssl-108580	Sclerotinia sclerotiorum	33.63	6.00e-12	65.50
IUUC-Sar-113333	Sorex araneus	84.23	0.00e+00	1223.00
IUUC-Ssc-116222	Sus scrofa	78.53	0.00e+00	1076.00
IUUC-Tgu-117019	Taeniopygia guttata	73.16	0.00e+00	1056.00
IUUC-Tru-118481	Takifugu rubripes	59.78	0.00e+00	848.00
IUUC-Tni-119796	Tetraodon nigroviridis	51.00	0.00e+00	683.00
IUUC-Tbe-127538	Tupaia belangeri	83.98	0.00e+00	1189.00
IUUC-Ttr-128787	Tursiops truncatus	86.79	0.00e+00	1199.00
IUUC-Xtr-132476	Xenopus tropicalis	61.90	0.00e+00	847.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence