iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027328

Ensembl Protein ID

CMP265CT

UniProt Accession

M1UVB4; M1UVB4_CYAM1

Genbank Protein ID

BAM81871.1

Protein Name

Eukaryotic translation initiation factor eIF-3 subunit F

Genbank Nucleotide ID

AP006498

Gene Name

CYME_CMP265C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMP265C	CMP265CT	CMP265CT

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	27.22	3.00e-21	100.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MDLVPVAGVT GQTLQVHASP TVILEILEQF FLKKPDQERV IGALLGEVNV LDDEHSTSAG 60
TDAAVRRQIE VWGSFYVPHS ETDTEIALDI DYFGQMRALS LQDGSTGPTV DIIGWYTTGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCTGG TGCCAGTCGC TGGCGTTACA GGCCAGACGC TGCAGGTGCA CGCTTCGCCC 60
ACGGTTATTC TTGAGATTCT TGAACAATTC TTTCTGAAGA AACCAGACCA GGAACGGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

Gene Ontology

GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0003743--F:translation initiation factor activity

KEGG

cme:CYME_CMP265C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	25.33	2.00e-16	77.40
IUUC-Aml-001527	Ailuropoda melanoleuca	27.33	3.00e-24	103.00
IUUC-Atr-002686	Amborella trichopoda	28.50	7.00e-17	78.60
IUUC-Apl-003977	Anas platyrhynchos	26.29	6.00e-20	88.20
IUUC-Aca-004335	Anolis carolinensis	26.35	9.00e-25	105.00
IUUC-Aly-005945	Arabidopsis lyrata	27.49	1.00e-19	87.40
IUUC-Ath-007045	Arabidopsis thaliana	26.69	2.00e-17	80.50
IUUC-Acl-008365	Aspergillus clavatus	25.84	3.00e-15	73.20
IUUC-Afl-008742	Aspergillus flavus	23.97	4.00e-12	63.20
IUUC-Afu-009030	Aspergillus fumigatus	24.92	2.00e-15	74.30
IUUC-Ani-009212	Aspergillus nidulans	23.82	5.00e-14	69.30
IUUC-Ang-009712	Aspergillus niger	25.84	3.00e-14	70.50
IUUC-Aor-009885	Aspergillus oryzae	24.14	1.00e-14	71.60
IUUC-Ate-010315	Aspergillus terreus	24.01	5.00e-12	62.80
IUUC-Ame-010801	Astyanax mexicanus	30.56	9.00e-09	51.60
IUUC-Bgr-011982	Blumeria graminis	25.38	3.00e-15	73.60
IUUC-Bta-012804	Bos taurus	27.85	1.00e-25	108.00
IUUC-Bci-013891	Botrytis cinerea	24.54	7.00e-07	45.80
IUUC-Bdi-014328	Brachypodium distachyon	25.08	8.00e-15	71.60
IUUC-Bol-015446	Brassica oleracea	26.89	2.00e-20	90.50
IUUC-Bra-016862	Brassica rapa	26.89	5.00e-20	89.00
IUUC-Cel-018171	Caenorhabditis elegans	23.24	1.00e-13	67.80
IUUC-Cja-019335	Callithrix jacchus	27.22	1.00e-24	104.00
IUUC-Cfa-020138	Canis familiaris	27.33	2.00e-24	103.00
IUUC-Cpo-022109	Cavia porcellus	26.02	8.00e-19	85.10
IUUC-Cre-022664	Chlamydomonas reinhardtii	26.42	6.00e-23	98.60
IUUC-Csa-023994	Chlorocebus sabaeus	27.22	1.00e-24	105.00
IUUC-Cho-024351	Choloepus hoffmanni	22.82	3.00e-08	50.40
IUUC-Cin-025801	Ciona intestinalis	26.43	9.00e-25	104.00
IUUC-Csv-025805	Ciona savignyi	25.56	8.00e-24	101.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	23.66	8.00e-12	62.00
IUUC-Cne-026868	Cryptococcus neoformans	26.33	1.00e-10	57.80
IUUC-Dre-028085	Danio rerio	25.70	6.00e-23	98.60
IUUC-Dno-030099	Dasypus novemcinctus	27.33	5.00e-24	102.00
IUUC-Dor-030324	Dipodomys ordii	26.14	5.00e-15	72.80
IUUC-Dse-031314	Dothistroma septosporum	24.44	4.00e-13	66.20
IUUC-Dme-031926	Drosophila melanogaster	26.52	2.00e-20	90.10
IUUC-Ete-032569	Echinops telfairi	25.63	4.00e-20	89.40
IUUC-Eca-033502	Equus caballus	26.81	1.00e-21	94.70
IUUC-Eeu-034883	Erinaceus europaeus	33.75	1.00e-07	47.40
IUUC-Fca-035873	Felis catus	27.33	3.00e-24	103.00
IUUC-Fal-036921	Ficedula albicollis	26.67	1.00e-25	107.00
IUUC-Fox-037765	Fusarium oxysporum	23.17	2.00e-08	50.40
IUUC-Fso-038240	Fusarium solani	23.49	1.00e-09	55.10
IUUC-Gmo-038864	Gadus morhua	26.50	4.00e-23	99.40
IUUC-Ggr-039862	Gaeumannomyces graminis	31.20	6.00e-10	55.80
IUUC-Gga-040952	Gallus gallus	26.67	2.00e-25	107.00
IUUC-Gac-041677	Gasterosteus aculeatus	28.08	4.00e-25	105.00
IUUC-Gma-043061	Glycine max	30.21	8.00e-16	75.10
IUUC-Ggo-045591	Gorilla gorilla	27.22	1.00e-24	104.00
IUUC-Hsa-046860	Homo sapiens	27.22	1.00e-24	105.00
IUUC-Hvu-047410	Hordeum vulgare	19.75	9.00e-06	40.40
IUUC-Itr-048211	Ictidomys tridecemlineatus	27.33	3.00e-24	103.00
IUUC-Lch-049410	Latimeria chalumnae	32.09	1.00e-15	73.90
IUUC-Lpe-051102	Leersia perrieri	26.44	2.00e-16	77.00
IUUC-Loc-052016	Lepisosteus oculatus	24.29	1.00e-16	77.80
IUUC-Lma-053157	Leptosphaeria maculans	24.44	3.00e-14	70.10
IUUC-Laf-054568	Loxodonta africana	27.22	2.00e-24	104.00
IUUC-Mcc-054613	Macaca mulatta	27.22	1.00e-24	104.00
IUUC-Meu-056832	Macropus eugenii	31.91	2.00e-08	50.10
IUUC-Mor-057104	Magnaporthe oryzae	25.55	2.00e-11	60.80
IUUC-Mtr-058445	Medicago truncatula	27.33	8.00e-21	91.70
IUUC-Mla-059038	Melampsora laricipopulina	23.10	3.00e-08	50.10
IUUC-Mga-059548	Meleagris gallopavo	26.15	2.00e-21	93.20
IUUC-Mvi-060487	Microbotryum violaceum	23.55	1.00e-07	48.10
IUUC-Mmr-060577	Microcebus murinus	29.01	5.00e-07	46.20
IUUC-Mdo-062376	Monodelphis domestica	26.13	5.00e-25	105.00
IUUC-Mmu-063254	Mus musculus	27.33	4.00e-24	103.00
IUUC-Mac-065635	Musa acuminata	24.53	4.00e-17	79.30
IUUC-Mpu-066314	Mustela putorius furo	27.33	2.00e-24	103.00
IUUC-Mlu-067512	Myotis lucifugus	27.01	5.00e-24	102.00
IUUC-Nfi-068262	Neosartorya fischeri	24.92	3.00e-15	73.60
IUUC-Ncr-068872	Neurospora crassa	29.77	5.00e-11	59.30
IUUC-Nle-070118	Nomascus leucogenys	27.33	3.00e-24	103.00
IUUC-Opr-071228	Ochotona princeps	25.77	5.00e-21	92.00
IUUC-Ont-072600	Oreochromis niloticus	26.98	3.00e-24	102.00
IUUC-Oan-073584	Ornithorhynchus anatinus	26.15	5.00e-22	95.10
IUUC-Ocu-074542	Oryctolagus cuniculus	26.13	5.00e-24	102.00
IUUC-Oba-075923	Oryza barthii	26.32	4.00e-17	79.30
IUUC-Obr-076313	Oryza brachyantha	26.44	2.00e-16	77.00
IUUC-Ogl-076932	Oryza glaberrima	26.32	4.00e-17	79.30
IUUC-Ogu-078152	Oryza glumaepatula	26.32	4.00e-17	79.30
IUUC-Oin-079528	Oryza indica	26.32	4.00e-17	79.30
IUUC-Olo-080401	Oryza longistaminata	26.32	4.00e-17	79.30
IUUC-Ome-081553	Oryza meridionalis	26.32	4.00e-17	79.30
IUUC-Oni-082090	Oryza nivara	26.44	5.00e-17	79.00
IUUC-Opu-083583	Oryza punctata	26.44	6.00e-17	78.60
IUUC-Oru-084492	Oryza rufipogon	26.32	4.00e-17	79.30
IUUC-Osa-085383	Oryza sativa	26.32	4.00e-17	79.30
IUUC-Ola-086835	Oryzias latipes	28.08	8.00e-25	105.00
IUUC-Olu-087716	Ostreococcus lucimarinus	22.34	1.00e-08	51.20
IUUC-Oga-088886	Otolemur garnettii	27.33	1.00e-24	104.00
IUUC-Oar-090079	Ovis aries	27.85	1.00e-25	107.00
IUUC-Ptr-091457	Pan troglodytes	27.22	1.00e-24	105.00
IUUC-Pan-092317	Papio anubis	26.07	1.00e-11	60.50
IUUC-Psi-093129	Pelodiscus sinensis	27.61	3.00e-22	96.70
IUUC-Pma-094488	Petromyzon marinus	26.73	3.00e-26	109.00
IUUC-Pno-095049	Phaeosphaeria nodorum	24.44	1.00e-14	71.20
IUUC-Ppa-095341	Physcomitrella patens	26.10	5.00e-26	108.00
IUUC-Pfo-096286	Poecilia formosa	26.73	2.00e-24	103.00
IUUC-Pab-097765	Pongo abelii	27.22	1.00e-24	105.00
IUUC-Pop-099131	Populus trichocarpa	28.53	5.00e-21	92.40
IUUC-Pca-100524	Procavia capensis	23.08	9.00e-11	57.80
IUUC-Ppe-101934	Prunus persica	28.62	1.00e-23	100.00
IUUC-Pva-102577	Pteropus vampyrus	27.01	6.00e-24	102.00
IUUC-Pgr-103521	Puccinia graminis	24.42	1.00e-10	58.20
IUUC-Ptt-103773	Puccinia triticina	23.89	5.00e-04	36.20
IUUC-Pte-104304	Pyrenophora teres	25.16	4.00e-14	69.70
IUUC-Pyt-104563	Pyrenophora triticirepentis	25.16	5.00e-14	69.70
IUUC-Rno-105717	Rattus norvegicus	27.33	3.00e-24	103.00
IUUC-Sha-107190	Sarcophilus harrisii	25.99	3.00e-24	103.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	23.84	4.00e-12	62.80
IUUC-Spo-108355	Schizosaccharomyces pombe	23.42	2.00e-13	67.40
IUUC-Ssl-108446	Sclerotinia sclerotiorum	28.97	3.00e-03	34.30
IUUC-Smo-109374	Selaginella moellendorffii	25.79	2.00e-23	100.00
IUUC-Sit-110119	Setaria italica	26.10	4.00e-16	75.90
IUUC-Sly-111570	Solanum lycopersicum	31.98	1.00e-17	80.90
IUUC-Stu-112308	Solanum tuberosum	28.12	2.00e-18	83.20
IUUC-Sar-113515	Sorex araneus	23.30	2.30e-01	26.20
IUUC-Sbi-114605	Sorghum bicolor	26.78	4.00e-17	80.10
IUUC-Sre-114906	Sporisorium reilianum	28.48	2.00e-19	87.00
IUUC-Tgu-117087	Taeniopygia guttata	25.94	8.00e-21	91.30
IUUC-Tru-117700	Takifugu rubripes	28.93	7.00e-26	108.00
IUUC-Tni-120470	Tetraodon nigroviridis	26.73	1.00e-25	107.00
IUUC-Tca-121109	Theobroma cacao	30.89	4.00e-16	75.90
IUUC-Tre-122095	Trichoderma reesei	23.34	3.00e-09	53.90
IUUC-Tvi-122580	Trichoderma virens	23.34	6.00e-10	55.80
IUUC-Tae-125129	Triticum aestivum	26.44	2.00e-17	80.50
IUUC-Tur-126658	Triticum urartu	25.81	3.00e-16	76.30
IUUC-Tme-127043	Tuber melanosporum	25.77	3.00e-17	80.10
IUUC-Tbe-127927	Tupaia belangeri	27.33	3.00e-24	103.00
IUUC-Ttr-129231	Tursiops truncatus	27.65	9.00e-25	105.00
IUUC-Uma-129578	Ustilago maydis	28.30	4.00e-18	82.80
IUUC-Vda-129730	Verticillium dahliae	24.05	2.00e-13	67.80
IUUC-Vpa-130606	Vicugna pacos	28.24	3.00e-07	46.20
IUUC-Vvi-130968	Vitis vinifera	26.44	2.00e-19	87.00
IUUC-Xtr-132203	Xenopus tropicalis	26.98	5.00e-25	105.00
IUUC-Xma-133972	Xiphophorus maculatus	26.73	6.00e-24	102.00
IUUC-Yli-134553	Yarrowia lipolytica	24.15	2.00e-15	73.90
IUUC-Zma-134941	Zea mays	25.00	1.00e-12	64.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence