iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000020239.6	ENSRNOT00000027430.6	ENSRNOP00000027430.4
ENSRNOG00000020239.6	ENSRNOT00000088104.1	ENSRNOP00000075502.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/NZF	2.20e-21	75.4	482	507

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/NZF

   S: 3    aqWaCsaCTflNePeavkCemCsrpR 28
           +qWaC+aCT +N P+a +C++C +p+
   Q: 482  GQWACPACTLINTPRAKHCAACHTPQ 507
           89*********************996 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MGSSASSLAA ETESDHGFPG GPPYPGPPTA AGWCRSGPGE TVWGSALVTR QHPRPRARSH 60
THSPGSMATV GEWSCARCTF LNPAGQRQCS ICEAPRHKPD LDQILRLSVE EQKWPCARCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGATTCC CAGTGCCGCG TGCGCCCCTG ACGCGCCGTA GCCTTCGGCC CCGGCTGGGC 60
TCCACGCTAC GGAGGCGGCG TAAGACATAC CGGGTGGGCC GGGCGGGACG GCGGGCGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease

Interpro

IPR022684--Calpain_cysteine_protease
IPR000169--Pept_cys_AS
IPR001300--Peptidase_C2_calpain_cat
IPR001876--Znf_RanBP2

PROSITE

PS50203--CALPAIN_CAT
PS00139--THIOL_PROTEASE_CYS
PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2

Pfam

PF00648--Peptidase_C2
PF00641--zf-RanBP

PRINTS

PR00704--CALPAIN

SMART

SM00230--CysPc
SM00547--ZnF_RBZ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004198--F:calcium-dependent cysteine-type endopeptidase activity
GO:0008270--F:zinc ion binding
GO:0006508--P:proteolysis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001505	Ailuropoda melanoleuca	83.30	0.00e+00	1643.00
IUUC-Apl-003593	Anas platyrhynchos	77.21	0.00e+00	987.00
IUUC-Aca-005082	Anolis carolinensis	70.29	0.00e+00	1629.00
IUUC-Aly-006462	Arabidopsis lyrata	35.48	5.00e-06	45.80
IUUC-Ath-007657	Arabidopsis thaliana	35.48	5.00e-06	45.80
IUUC-Bta-013065	Bos taurus	81.60	0.00e+00	1664.00
IUUC-Bci-013702	Botrytis cinerea	25.25	3.00e-03	36.20
IUUC-Bol-016604	Brassica oleracea	40.98	2.00e-05	43.90
IUUC-Bra-017928	Brassica rapa	35.48	6.00e-06	45.10
IUUC-Cja-019708	Callithrix jacchus	84.69	0.00e+00	1379.00
IUUC-Cfa-020860	Canis familiaris	82.84	0.00e+00	1676.00
IUUC-Cpo-022525	Cavia porcellus	85.71	0.00e+00	1776.00
IUUC-Csa-023316	Chlorocebus sabaeus	85.40	0.00e+00	1437.00
IUUC-Dre-028676	Danio rerio	73.18	0.00e+00	1214.00
IUUC-Dno-029448	Dasypus novemcinctus	70.34	0.00e+00	790.00
IUUC-Dor-030214	Dipodomys ordii	80.15	0.00e+00	1271.00
IUUC-Dme-032148	Drosophila melanogaster	52.29	0.00e+00	710.00
IUUC-Eca-033450	Equus caballus	82.07	0.00e+00	1354.00
IUUC-Eeu-034986	Erinaceus europaeus	80.18	2.00e-130	460.00
IUUC-Fca-036018	Felis catus	81.80	0.00e+00	1308.00
IUUC-Fal-037308	Ficedula albicollis	71.83	0.00e+00	1660.00
IUUC-Gga-041032	Gallus gallus	72.04	0.00e+00	1619.00
IUUC-Ggo-045635	Gorilla gorilla	83.61	0.00e+00	1711.00
IUUC-Hsa-045791	Homo sapiens	84.06	0.00e+00	1714.00
IUUC-Hvu-047244	Hordeum vulgare	30.88	1.00e-04	41.60
IUUC-Itr-048401	Ictidomys tridecemlineatus	87.51	0.00e+00	1825.00
IUUC-Lch-050282	Latimeria chalumnae	64.92	0.00e+00	1343.00
IUUC-Loc-052478	Lepisosteus oculatus	69.94	0.00e+00	1165.00
IUUC-Laf-054556	Loxodonta africana	84.34	0.00e+00	1062.00
IUUC-Mcc-054669	Macaca mulatta	83.70	0.00e+00	1670.00
IUUC-Meu-056257	Macropus eugenii	72.14	0.00e+00	847.00
IUUC-Mtr-058368	Medicago truncatula	50.00	2.90e-02	32.00
IUUC-Mga-059232	Meleagris gallopavo	71.95	0.00e+00	1587.00
IUUC-Mmr-061524	Microcebus murinus	81.69	0.00e+00	1677.00
IUUC-Mdo-062883	Monodelphis domestica	75.16	0.00e+00	1724.00
IUUC-Mmu-064018	Mus musculus	96.66	0.00e+00	2010.00
IUUC-Mpu-066215	Mustela putorius furo	81.73	0.00e+00	1704.00
IUUC-Mlu-067181	Myotis lucifugus	81.55	0.00e+00	1646.00
IUUC-Ncr-068633	Neurospora crassa	48.28	4.00e-03	36.20
IUUC-Opr-070414	Ochotona princeps	83.17	0.00e+00	1732.00
IUUC-Ont-072063	Oreochromis niloticus	70.22	0.00e+00	1207.00
IUUC-Oan-073086	Ornithorhynchus anatinus	69.75	0.00e+00	1135.00
IUUC-Ocu-074037	Oryctolagus cuniculus	81.21	0.00e+00	1526.00
IUUC-Obr-076679	Oryza brachyantha	31.43	2.00e-05	43.90
IUUC-Ola-086498	Oryzias latipes	74.79	0.00e+00	1233.00
IUUC-Oga-088087	Otolemur garnettii	84.12	0.00e+00	1785.00
IUUC-Pan-092918	Papio anubis	85.45	0.00e+00	1467.00
IUUC-Pma-094435	Petromyzon marinus	55.43	0.00e+00	854.00
IUUC-Ppa-095919	Physcomitrella patens	33.68	2.00e-05	43.90
IUUC-Pfo-096574	Poecilia formosa	67.79	0.00e+00	1328.00
IUUC-Pab-098098	Pongo abelii	80.42	0.00e+00	852.00
IUUC-Pca-100428	Procavia capensis	72.83	0.00e+00	1387.00
IUUC-Ppe-101337	Prunus persica	31.08	1.00e-04	40.80
IUUC-Pte-104280	Pyrenophora teres	29.27	5.00e-04	39.30
IUUC-Sha-106877	Sarcophilus harrisii	71.76	0.00e+00	1550.00
IUUC-Ssc-115957	Sus scrofa	79.09	0.00e+00	1585.00
IUUC-Tgu-116764	Taeniopygia guttata	72.93	0.00e+00	1602.00
IUUC-Tru-118000	Takifugu rubripes	74.91	0.00e+00	1231.00
IUUC-Tni-119762	Tetraodon nigroviridis	66.67	0.00e+00	931.00
IUUC-Ttr-128978	Tursiops truncatus	82.74	0.00e+00	1706.00
IUUC-Vda-130005	Verticillium dahliae	45.16	2.40e-02	33.50
IUUC-Vvi-131427	Vitis vinifera	29.03	5.00e-04	38.90
IUUC-Xtr-132023	Xenopus tropicalis	61.78	0.00e+00	1242.00
IUUC-Xma-133697	Xiphophorus maculatus	63.85	0.00e+00	920.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence