iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050005

Ensembl Protein ID

ENSLACP00000004099.1

UniProt Accession

H3A378; H3A378_LATCH

Genbank Protein ID

ENSLACP00000004099

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01155133

Gene Name

TRIM3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000003642.1	ENSLACT00000004135.1	ENSLACP00000004099.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.20e-09	36.5	22	63

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++ + p+vlpC H+f+++Clq++  ++  +s + +CP+Cr
   Q: 22   CSICLDRYHN-PKVLPCLHTFCEKCLQNY-IPP--QSLTLSCPVCR 63
           ********99.******************.555..9999******8 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MAKRESSTSP VVRQIDKQFL VCSICLDRYH NPKVLPCLHT FCEKCLQNYI PPQSLTLSCP 60
VCRQTSILPE KGVAALQNNF FITNLMEVLQ RNPESVREET SMMESVSAVS GKPLSCPNHE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAAGC GGGAGTCCAG TACCAGCCCA GTTGTGCGTC AGATTGACAA GCAGTTTTTA 60
GTGTGCAGTA TCTGTCTGGA TCGGTACCAC AACCCCAAAG TTCTGCCCTG CCTGCATACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR003649--Bbox_C
IPR017868--Filamin/ABP280_repeat-like
IPR001298--Filamin/ABP280_rpt
IPR013783--Ig-like_fold
IPR014756--Ig_E-set
IPR001258--NHL_repeat
IPR013017--NHL_repeat_subgr
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50194--FILAMIN_REPEAT
PS51125--NHL
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00630--Filamin
PF01436--NHL
PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00502--BBC
SM00336--BBOX
SM00557--IG_FLMN
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001769	Ailuropoda melanoleuca	69.28	0.00e+00	1086.00
IUUC-Bta-013091	Bos taurus	69.54	0.00e+00	1105.00
IUUC-Bdi-014581	Brachypodium distachyon	27.27	4.00e-08	52.40
IUUC-Cfa-020946	Canis familiaris	69.28	0.00e+00	1104.00
IUUC-Cpo-021747	Cavia porcellus	69.15	0.00e+00	1102.00
IUUC-Dre-028509	Danio rerio	78.15	0.00e+00	1220.00
IUUC-Dno-029414	Dasypus novemcinctus	69.41	0.00e+00	1107.00
IUUC-Ete-032776	Echinops telfairi	69.02	0.00e+00	1092.00
IUUC-Eca-034308	Equus caballus	69.54	0.00e+00	1109.00
IUUC-Eeu-034845	Erinaceus europaeus	63.01	0.00e+00	969.00
IUUC-Fca-035594	Felis catus	69.28	0.00e+00	1103.00
IUUC-Gga-040515	Gallus gallus	76.93	0.00e+00	1216.00
IUUC-Gac-042506	Gasterosteus aculeatus	75.13	0.00e+00	1154.00
IUUC-Ggo-045603	Gorilla gorilla	69.02	0.00e+00	1099.00
IUUC-Hsa-046416	Homo sapiens	69.15	0.00e+00	1102.00
IUUC-Itr-048448	Ictidomys tridecemlineatus	69.15	0.00e+00	1102.00
IUUC-Loc-052433	Lepisosteus oculatus	80.73	0.00e+00	1284.00
IUUC-Laf-053930	Loxodonta africana	69.15	0.00e+00	1100.00
IUUC-Mcc-055778	Macaca mulatta	68.89	0.00e+00	1097.00
IUUC-Meu-056100	Macropus eugenii	70.32	0.00e+00	1046.00
IUUC-Mmr-060733	Microcebus murinus	69.02	0.00e+00	1100.00
IUUC-Mdo-062705	Monodelphis domestica	71.76	0.00e+00	1139.00
IUUC-Mmu-063965	Mus musculus	69.28	0.00e+00	1103.00
IUUC-Mpu-066757	Mustela putorius furo	69.28	0.00e+00	1105.00
IUUC-Ont-071742	Oreochromis niloticus	76.69	0.00e+00	1223.00
IUUC-Ocu-074675	Oryctolagus cuniculus	69.37	0.00e+00	1107.00
IUUC-Ogu-078410	Oryza glumaepatula	29.49	5.00e-05	43.50
IUUC-Oin-079129	Oryza indica	29.25	3.00e-07	49.70
IUUC-Opu-083277	Oryza punctata	29.25	3.00e-07	50.10
IUUC-Ola-087179	Oryzias latipes	75.39	0.00e+00	1158.00
IUUC-Oga-089121	Otolemur garnettii	69.15	0.00e+00	1102.00
IUUC-Ptr-090907	Pan troglodytes	69.15	0.00e+00	1102.00
IUUC-Pfo-097095	Poecilia formosa	76.59	0.00e+00	1218.00
IUUC-Pva-103232	Pteropus vampyrus	69.15	0.00e+00	1085.00
IUUC-Rno-104998	Rattus norvegicus	69.15	0.00e+00	1103.00
IUUC-Sha-107604	Sarcophilus harrisii	71.76	0.00e+00	1141.00
IUUC-Tru-118267	Takifugu rubripes	75.88	0.00e+00	1203.00
IUUC-Tsy-119487	Tarsius syrichta	69.17	0.00e+00	758.00
IUUC-Tni-120733	Tetraodon nigroviridis	75.26	0.00e+00	1162.00
IUUC-Tur-126062	Triticum urartu	27.35	2.00e-06	47.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence