iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014647

Ensembl Protein ID

BRADI1G09090.1

UniProt Accession

I1GNG3; I1GNG3_BRADI

Genbank Protein ID

KQK13275.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100844126; BRADI_1g09090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G09090	BRADI1G09090.1	BRADI1G09090.1
BRADI1G09090	BRADI1G09090.2	BRADI1G09090.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	4.20e-17	62.7	117	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.............elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           +vkvs++g+++++++dl+ + +++dL  a+++ +              ++++s+v  +YeD+dGD++ l++D++++++v       s++rl+i+k
   Q: 117  FVKVSMDGAPYLRKVDLKMYNTYKDLSIALQKmFStfsatgnegkmveAVNGSDVVTTYEDKDGDWM-LVGDVPWEMFVA------SCKRLRIMK 204
           8*******************************62257788999999989999***************.************......*******97 PP

Organism

Brachypodium distachyon

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAGADVDVGT ELRLGLPGGG AEAAKAAKRG YEDTIDLKLT LPTGGVQKDS GKPEPAAEKA 60
AADPEKPPAP KAQAVGWPPV RSYRRNAMTV QSVKIKKEEE AEKEQPAATA GGNGSAFVKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTCCTCTC TTCCACCACC ACAACAAAGC TTCTTTACTT TACATACACA CACAGGGAGA 60
GAAATTAACC AAGGAATCAG CAGGCAGCTC TCAACTAGCC ACCGTGGAGG TGTCCAAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

bdi:100844126

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	94.08	3.00e-72	263.00
IUUC-Apl-003220	Anas platyrhynchos	25.00	1.60e-02	32.70
IUUC-Aca-004830	Anolis carolinensis	27.27	1.60e-02	32.30
IUUC-Cja-019530	Callithrix jacchus	25.00	1.80e-02	33.10
IUUC-Cfa-020019	Canis familiaris	27.27	2.40e-02	32.30
IUUC-Cpo-021749	Cavia porcellus	25.00	2.10e-02	32.70
IUUC-Csa-023127	Chlorocebus sabaeus	27.27	1.70e-02	32.30
IUUC-Dre-027850	Danio rerio	28.21	4.80e-01	28.10
IUUC-Dno-029244	Dasypus novemcinctus	25.00	1.80e-02	32.70
IUUC-Dor-030191	Dipodomys ordii	27.27	1.80e-02	32.70
IUUC-Eca-033719	Equus caballus	25.00	2.30e-02	32.70
IUUC-Eeu-035270	Erinaceus europaeus	27.27	8.00e-03	33.90
IUUC-Fca-035804	Felis catus	25.00	2.30e-02	32.70
IUUC-Fal-037426	Ficedula albicollis	27.27	2.40e-02	32.30
IUUC-Gga-040715	Gallus gallus	27.27	2.00e-02	32.70
IUUC-Gac-041966	Gasterosteus aculeatus	25.97	2.70e-01	28.50
IUUC-Hsa-045687	Homo sapiens	25.00	2.00e-02	32.70
IUUC-Hvu-047332	Hordeum vulgare	88.41	5.00e-81	292.00
IUUC-Itr-048521	Ictidomys tridecemlineatus	25.00	2.10e-02	32.70
IUUC-Loc-051887	Lepisosteus oculatus	25.61	8.30e-02	30.40
IUUC-Laf-053735	Loxodonta africana	25.00	2.20e-02	32.70
IUUC-Mcc-054955	Macaca mulatta	25.00	2.00e-02	32.70
IUUC-Mmr-061160	Microcebus murinus	27.27	1.70e-02	32.70
IUUC-Mdo-062388	Monodelphis domestica	25.00	1.90e-02	32.70
IUUC-Mmu-063730	Mus musculus	25.00	2.30e-02	32.70
IUUC-Mpu-065683	Mustela putorius furo	25.00	2.30e-02	32.70
IUUC-Mlu-067270	Myotis lucifugus	25.00	9.00e-03	33.90
IUUC-Nle-069491	Nomascus leucogenys	25.00	2.00e-02	32.70
IUUC-Opr-071160	Ochotona princeps	25.00	2.20e-02	32.70
IUUC-Ont-071943	Oreochromis niloticus	25.97	2.90e-01	28.90
IUUC-Oan-073255	Ornithorhynchus anatinus	27.27	2.10e-02	32.70
IUUC-Obr-076428	Oryza brachyantha	72.73	3.00e-62	230.00
IUUC-Ogl-077356	Oryza glaberrima	66.53	1.00e-60	224.00
IUUC-Ogu-078777	Oryza glumaepatula	66.53	6.00e-61	226.00
IUUC-Oin-079778	Oryza indica	66.53	1.00e-60	224.00
IUUC-Ome-081785	Oryza meridionalis	61.57	1.00e-57	214.00
IUUC-Oni-082706	Oryza nivara	66.95	5.00e-61	226.00
IUUC-Opu-083338	Oryza punctata	69.75	6.00e-63	233.00
IUUC-Oru-084731	Oryza rufipogon	66.53	1.00e-60	224.00
IUUC-Osa-085413	Oryza sativa	66.53	1.00e-60	224.00
IUUC-Oga-088931	Otolemur garnettii	25.00	1.80e-02	33.10
IUUC-Ptr-091043	Pan troglodytes	25.00	2.00e-02	32.70
IUUC-Psi-093566	Pelodiscus sinensis	27.27	1.90e-02	32.70
IUUC-Pfo-096649	Poecilia formosa	25.97	3.40e-01	28.90
IUUC-Pab-098182	Pongo abelii	25.00	1.90e-02	32.70
IUUC-Rno-105324	Rattus norvegicus	27.27	2.40e-02	32.70
IUUC-Sha-106844	Sarcophilus harrisii	26.04	9.00e-03	31.60
IUUC-Sit-109721	Setaria italica	72.96	5.00e-65	239.00
IUUC-Sbi-114407	Sorghum bicolor	73.19	1.00e-61	228.00
IUUC-Tgu-117454	Taeniopygia guttata	27.27	1.90e-02	32.70
IUUC-Tru-117548	Takifugu rubripes	25.97	3.00e-01	28.90
IUUC-Tsy-119108	Tarsius syrichta	25.00	2.00e-02	32.70
IUUC-Tae-125549	Triticum aestivum	88.41	2.00e-81	294.00
IUUC-Tbe-127251	Tupaia belangeri	27.27	2.30e-02	32.70
IUUC-Ttr-129157	Tursiops truncatus	25.00	2.30e-02	32.70
IUUC-Vpa-130130	Vicugna pacos	24.32	2.00e-02	32.70
IUUC-Xtr-132566	Xenopus tropicalis	27.27	2.70e-02	32.30

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence