iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d020511	Zm00001d020511_T002	Zm00001d020511_T002
Zm00001d020511	Zm00001d020511_T001	Zm00001d020511_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	1.50e-62	209.8	116	190
ULD/UDP/UBQ/UBQ_PIM	7.40e-38	130.3	117	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 2    likvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           +ikvktLtgkeiei+ie++d i+rikerveekeGiPP+qqrliyaGkql+ddkta+dyn+e+gsvLhLvLaLrGG
   Q: 116  MIKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 190
           8*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 3    ltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvv 71
           ++vktl+gke+e+++++ d++ + Ke+++++ g+pp qq+LIyaGk+L Dd+t ++++i+ gsv+hlv+
   Q: 117  IKVKTLTGKEIEIDIEPTDSIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVL 185
           89*****************************************************************97 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MRQARVNQIK EKGNFLGRSS ASLSQGSSSS PSSTTVRGRK RRGEDADLRE DPDGEDHHPR 60
GGEQRHRRQR QSQNPADQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR LRGGTMIKVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGAAGGAA GGAGTGGTAG CGCACCCAGT CACGCCGCCC CGCCGCCGCC CCCTATAAAT 60
GCGCCAAGCC CGAGTTAACC AAATTAAAGA AAAAGGAAAT TTTCTTGGGC GTTCTTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003172	Amborella trichopoda	87.80	3.00e-38	148.00
IUUC-Cpo-022447	Cavia porcellus	78.12	4.00e-17	78.60
IUUC-Cho-024788	Choloepus hoffmanni	84.00	1.00e-24	103.00
IUUC-Ete-032442	Echinops telfairi	84.00	1.00e-24	103.00
IUUC-Eeu-035250	Erinaceus europaeus	81.25	3.00e-18	82.40
IUUC-Gmo-038699	Gadus morhua	81.25	1.00e-18	84.00
IUUC-Hvu-047076	Hordeum vulgare	98.68	1.00e-28	117.00
IUUC-Itr-048900	Ictidomys tridecemlineatus	84.00	8.00e-25	103.00
IUUC-Lch-050564	Latimeria chalumnae	84.00	2.00e-25	105.00
IUUC-Meu-056784	Macropus eugenii	81.25	1.00e-18	84.00
IUUC-Ogu-078282	Oryza glumaepatula	61.90	3.00e-18	82.40
IUUC-Oni-082872	Oryza nivara	61.90	3.00e-18	82.40
IUUC-Sar-113327	Sorex araneus	81.25	3.00e-18	82.40
IUUC-Sre-114970	Sporisorium reilianum	81.33	3.00e-31	125.00
IUUC-Tru-118771	Takifugu rubripes	84.00	1.00e-25	106.00
IUUC-Vpa-130121	Vicugna pacos	78.12	6.00e-17	77.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence