iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017983

Ensembl Protein ID

Bra001050.1-P

UniProt Accession

M4CA21; M4CA21_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001050	Bra001050.1	Bra001050.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.90e-22	79.7	172	213
ULD/UDP/UBQ/UBQ_PIM	2.20e-24	86.2	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ + q+ +MG   +dr+++++aLraa+nn+e+AveyL++g
   Q: 172  LESTILQILDMGggaWDRDTVVRALRAAFNNPERAVEYLYSG 213
           78999**********************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk++vktlkg++fe+ev+++d+v+++K++i++++g   +p++++ LI++Gk+LkD+tt++e+++ ++s++++++ ksk
   Q: 1    MKIFVKTLKGTHFEIEVKPEDSVADVKKNIETVQGadvYPAAKLMLIHQGKVLKDETTIEENKVAENSFIVIMMAKSK 78
           99***********************************************************************99987 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKIFVKTLKG THFEIEVKPE DSVADVKKNI ETVQGADVYP AAKLMLIHQG KVLKDETTIE 60
ENKVAENSFI VIMMAKSKTA SAGASSASSG PTVQAKSMPT SSTQPPASVA IPAATAPAPV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATAT TTGTGAAAAC TCTCAAGGGG ACTCACTTCG AGATCGAAGT AAAACCTGAG 60
GATTCGGTAT GAGAAAGTCT GTTAGATAGT TTTCGTAATC CTTAATTGAG ACGGTTTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001195	Ailuropoda melanoleuca	38.96	5.00e-31	128.00
IUUC-Apl-003371	Anas platyrhynchos	39.53	5.00e-32	131.00
IUUC-Aly-005498	Arabidopsis lyrata	91.60	2.00e-118	418.00
IUUC-Ath-006676	Arabidopsis thaliana	90.94	2.00e-117	415.00
IUUC-Bol-015641	Brassica oleracea	93.44	3.00e-155	540.00
IUUC-Cpo-022145	Cavia porcellus	38.17	4.00e-33	135.00
IUUC-Ete-032583	Echinops telfairi	37.56	2.00e-20	92.80
IUUC-Gma-044370	Glycine max	78.88	1.00e-104	372.00
IUUC-Mtr-058148	Medicago truncatula	77.87	5.00e-107	380.00
IUUC-Psi-093477	Pelodiscus sinensis	39.59	4.00e-27	115.00
IUUC-Pop-099642	Populus trichocarpa	62.83	3.00e-134	471.00
IUUC-Pgr-103618	Puccinia graminis	40.07	3.00e-26	112.00
IUUC-Sha-107073	Sarcophilus harrisii	37.30	2.00e-29	123.00
IUUC-Sly-111480	Solanum lycopersicum	68.91	2.00e-139	488.00
IUUC-Sar-112925	Sorex araneus	38.63	6.00e-28	117.00
IUUC-Sre-114894	Sporisorium reilianum	55.00	1.00e-12	67.40
IUUC-Tbe-127493	Tupaia belangeri	45.04	2.00e-19	89.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence