iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095964

Ensembl Protein ID

PP1S286_52V6.1

UniProt Accession

A9TQ97; A9TQ97_PHYPA

Genbank Protein ID

EDQ54405.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545175

Gene Name

PHYPADRAFT_148936

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S286_52V6	PP1S286_52V6.1	PP1S286_52V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.10e-24	85.6	155	197
ULD/UDP/UBQ/UBQ_PIM	3.30e-20	72.6	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           ++e+ ++q+++MG   +dr+++l+aLraa+nn+e+AveyL++g
   Q: 155  ALESTVQQIMDMGggtWDRDTVLRALRAAFNNPERAVEYLYSG 197
           689*************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mk+ vktlkg++f l+v ed+ v+++K ki++ +g   +p++qq LI++Gk+LkD+tt+ ++++ ++ +++++++k+k
   Q: 1    MKISVKTLKGNHFDLHVAEDELVSSVKRKIEELQGkdaFPCAQQLLIHQGKVLKDETTMADNKVAENGFLVVMLTKTK 78
           99************************************************************************9987 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MKISVKTLKG NHFDLHVAED ELVSSVKRKI EELQGKDAFP CAQQLLIHQG KVLKDETTMA 60
DNKVAENGFL VVMLTKTKAT PAPAGGAPAS SSGPVQAPAA PAPAPAPAPA STSTPAPAAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTGCTGCT CCGGGAACTA ATTGAGTGTG TGGGGAGCGC TAGGGCTTGC GAAGCAGGGG 60
ACATCATCAT CGCAGCCAAT TGTGTGTTCT GTTGTGGTTC TAGAGGTGGG GATCCATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_148936

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	62.00	4.00e-71	261.00
IUUC-Aml-001195	Ailuropoda melanoleuca	41.96	3.00e-17	82.40
IUUC-Aca-004599	Anolis carolinensis	39.84	9.00e-17	80.50
IUUC-Afl-008605	Aspergillus flavus	40.16	3.00e-29	122.00
IUUC-Aor-010032	Aspergillus oryzae	40.16	3.00e-29	122.00
IUUC-Ame-011704	Astyanax mexicanus	46.92	8.00e-25	105.00
IUUC-Bci-013933	Botrytis cinerea	50.79	5.00e-21	94.40
IUUC-Bra-016970	Brassica rapa	58.70	2.00e-70	258.00
IUUC-Cja-018772	Callithrix jacchus	41.96	2.00e-17	82.40
IUUC-Cpo-022145	Cavia porcellus	42.86	3.00e-21	95.10
IUUC-Csa-023714	Chlorocebus sabaeus	41.96	1.00e-17	83.20
IUUC-Cho-024814	Choloepus hoffmanni	41.96	1.00e-17	83.20
IUUC-Cin-025741	Ciona intestinalis	28.51	8.00e-24	103.00
IUUC-Dre-028209	Danio rerio	35.71	9.00e-30	123.00
IUUC-Ete-032583	Echinops telfairi	41.07	2.00e-17	82.40
IUUC-Gga-040544	Gallus gallus	40.35	2.00e-19	89.00
IUUC-Ggo-045125	Gorilla gorilla	41.96	2.00e-17	83.20
IUUC-Hsa-046519	Homo sapiens	41.96	2.00e-17	83.20
IUUC-Hvu-047832	Hordeum vulgare	62.80	6.00e-71	260.00
IUUC-Itr-048295	Ictidomys tridecemlineatus	41.96	3.00e-17	82.00
IUUC-Lch-049719	Latimeria chalumnae	38.71	6.00e-37	147.00
IUUC-Lpe-051087	Leersia perrieri	60.80	9.00e-75	273.00
IUUC-Laf-054293	Loxodonta africana	41.96	2.00e-17	82.40
IUUC-Mcc-055600	Macaca mulatta	41.96	1.00e-17	83.20
IUUC-Meu-056082	Macropus eugenii	41.44	2.00e-17	82.40
IUUC-Mmr-061759	Microcebus murinus	41.59	2.00e-17	82.80
IUUC-Mac-065029	Musa acuminata	61.60	1.00e-65	243.00
IUUC-Nle-069655	Nomascus leucogenys	41.96	1.00e-17	83.20
IUUC-Oan-073258	Ornithorhynchus anatinus	42.34	2.00e-17	80.90
IUUC-Ocu-074831	Oryctolagus cuniculus	41.59	4.00e-17	82.00
IUUC-Oba-075392	Oryza barthii	59.20	5.00e-72	264.00
IUUC-Ogu-078883	Oryza glumaepatula	59.20	4.00e-72	264.00
IUUC-Oin-079817	Oryza indica	59.20	1.00e-71	262.00
IUUC-Olo-080929	Oryza longistaminata	58.80	1.00e-71	262.00
IUUC-Ome-081866	Oryza meridionalis	59.20	4.00e-72	264.00
IUUC-Oni-083092	Oryza nivara	59.20	1.00e-71	262.00
IUUC-Opu-083756	Oryza punctata	60.40	2.00e-74	271.00
IUUC-Oru-084816	Oryza rufipogon	59.20	1.00e-71	262.00
IUUC-Osa-086112	Oryza sativa	59.20	1.00e-71	262.00
IUUC-Oga-088023	Otolemur garnettii	40.87	5.00e-17	81.60
IUUC-Ptr-091165	Pan troglodytes	41.96	2.00e-17	82.80
IUUC-Psi-093477	Pelodiscus sinensis	42.57	9.00e-16	77.00
IUUC-Pab-097868	Pongo abelii	41.96	2.00e-17	82.40
IUUC-Pop-099416	Populus trichocarpa	67.34	4.00e-81	293.00
IUUC-Sha-107073	Sarcophilus harrisii	41.44	3.00e-17	82.40
IUUC-Sja-107851	Schizosaccharomyces japonicus	42.57	2.00e-37	149.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	43.81	3.00e-17	82.00
IUUC-Sbi-113871	Sorghum bicolor	59.20	3.00e-68	251.00
IUUC-Sre-114894	Sporisorium reilianum	64.44	3.00e-11	62.40
IUUC-Tsy-118836	Tarsius syrichta	41.07	3.00e-17	82.00
IUUC-Tni-120493	Tetraodon nigroviridis	36.10	2.00e-40	159.00
IUUC-Tae-125230	Triticum aestivum	59.22	6.00e-69	253.00
IUUC-Tur-126610	Triticum urartu	62.00	2.00e-71	263.00
IUUC-Tbe-127493	Tupaia belangeri	41.96	2.00e-17	83.20
IUUC-Uma-129484	Ustilago maydis	57.69	4.00e-12	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence