iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-021452

Ensembl Protein ID

ENSCPOP00000000413.2

UniProt Accession

H0UU05; H0UU05_CAVPO

Genbank Protein ID

ENSCPOP00000000413

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02047320

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000000467.3	ENSCPOT00000000472.2	ENSCPOP00000000413.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	41.53	2.00e-30	133.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cavia porcellus

Protein Sequence
(Fasta)

SEASCNWDEV IIDRTDQEAW PSITGVETDS VSECPPDSDS ASACGSENSS MATGSAQGSF 60
AGHTKKTNGN NGTNGALVQS PSNQSALGTG GVSGNGSAAR VWGVASGSGS GLAHCSVGSG 120

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Nucleotide Sequence
(Fasta)

AGCGAAGCCA GCTGCAACTG GGATGAAGTG ATAATAGACA GGACTGACCA GGAGGCGTGG 60
CCTTCCATCA CAGGAGTGGA GACTGATTCT GTCTCAGAAT GTCCTCCAGA CAGTGACTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	40.67	0.00e+00	735.00
IUUC-Apl-003191	Anas platyrhynchos	82.08	0.00e+00	2192.00
IUUC-Aca-004717	Anolis carolinensis	82.36	0.00e+00	2201.00
IUUC-Ame-010681	Astyanax mexicanus	50.87	0.00e+00	820.00
IUUC-Bta-012915	Bos taurus	35.78	9.00e-95	342.00
IUUC-Cja-019614	Callithrix jacchus	88.86	0.00e+00	2191.00
IUUC-Cfa-020452	Canis familiaris	36.21	1.00e-102	369.00
IUUC-Csa-023169	Chlorocebus sabaeus	40.40	0.00e+00	721.00
IUUC-Cho-024655	Choloepus hoffmanni	41.51	2.00e-116	414.00
IUUC-Dre-028059	Danio rerio	58.59	0.00e+00	1063.00
IUUC-Dno-029734	Dasypus novemcinctus	39.90	0.00e+00	728.00
IUUC-Dor-030671	Dipodomys ordii	44.13	0.00e+00	667.00
IUUC-Dme-032014	Drosophila melanogaster	38.71	4.00e-30	127.00
IUUC-Ete-032774	Echinops telfairi	81.20	0.00e+00	1497.00
IUUC-Eca-033866	Equus caballus	88.27	0.00e+00	2172.00
IUUC-Eeu-034572	Erinaceus europaeus	54.49	1.00e-39	159.00
IUUC-Fal-036856	Ficedula albicollis	80.79	0.00e+00	1964.00
IUUC-Gga-040531	Gallus gallus	85.58	0.00e+00	2184.00
IUUC-Gac-041681	Gasterosteus aculeatus	54.14	0.00e+00	888.00
IUUC-Ggo-045143	Gorilla gorilla	88.86	0.00e+00	2219.00
IUUC-Hsa-045913	Homo sapiens	90.12	0.00e+00	2214.00
IUUC-Lch-049619	Latimeria chalumnae	41.10	0.00e+00	796.00
IUUC-Loc-052289	Lepisosteus oculatus	70.37	0.00e+00	1064.00
IUUC-Laf-053607	Loxodonta africana	87.97	0.00e+00	2298.00
IUUC-Mcc-055342	Macaca mulatta	90.11	0.00e+00	2170.00
IUUC-Meu-056275	Macropus eugenii	47.95	1.00e-95	345.00
IUUC-Mtr-058185	Medicago truncatula	44.44	2.00e-03	38.10
IUUC-Mga-059241	Meleagris gallopavo	39.19	2.00e-130	461.00
IUUC-Mmr-061348	Microcebus murinus	36.03	1.00e-99	358.00
IUUC-Mdo-062155	Monodelphis domestica	83.25	0.00e+00	2213.00
IUUC-Mmu-064259	Mus musculus	43.54	0.00e+00	697.00
IUUC-Mac-065073	Musa acuminata	29.29	1.30e-01	31.60
IUUC-Mpu-066534	Mustela putorius furo	49.49	1.00e-78	289.00
IUUC-Mlu-067834	Myotis lucifugus	39.47	0.00e+00	743.00
IUUC-Nle-069168	Nomascus leucogenys	39.88	0.00e+00	701.00
IUUC-Opr-070976	Ochotona princeps	34.64	6.00e-77	283.00
IUUC-Ocu-074534	Oryctolagus cuniculus	71.80	0.00e+00	764.00
IUUC-Oga-088116	Otolemur garnettii	40.24	0.00e+00	727.00
IUUC-Oar-090041	Ovis aries	35.90	6.00e-95	343.00
IUUC-Ptr-091135	Pan troglodytes	88.00	0.00e+00	2158.00
IUUC-Pan-092665	Papio anubis	87.82	0.00e+00	2136.00
IUUC-Psi-093057	Pelodiscus sinensis	83.39	0.00e+00	2110.00
IUUC-Pma-094508	Petromyzon marinus	40.53	1.00e-78	287.00
IUUC-Pfo-097115	Poecilia formosa	53.43	0.00e+00	665.00
IUUC-Pab-097935	Pongo abelii	40.49	0.00e+00	732.00
IUUC-Pca-100481	Procavia capensis	75.93	0.00e+00	1272.00
IUUC-Pva-102376	Pteropus vampyrus	41.52	4.00e-61	230.00
IUUC-Rno-105508	Rattus norvegicus	36.70	5.00e-99	356.00
IUUC-Sar-113036	Sorex araneus	60.48	1.00e-40	162.00
IUUC-Ssc-115574	Sus scrofa	70.71	0.00e+00	1501.00
IUUC-Tgu-117233	Taeniopygia guttata	85.34	0.00e+00	2107.00
IUUC-Tru-117725	Takifugu rubripes	55.40	0.00e+00	976.00
IUUC-Tsy-118786	Tarsius syrichta	35.67	9.00e-69	256.00
IUUC-Tae-123684	Triticum aestivum	37.93	8.60e-02	32.00
IUUC-Tbe-127989	Tupaia belangeri	82.86	0.00e+00	901.00
IUUC-Ttr-128518	Tursiops truncatus	87.41	0.00e+00	2301.00
IUUC-Vpa-130230	Vicugna pacos	43.75	4.00e-74	274.00
IUUC-Xtr-132265	Xenopus tropicalis	73.84	0.00e+00	1774.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence