iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048262

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01069989

Gene Name

TRIM24

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000002959.2	ENSSTOT00000002977.2	ENSSTOP00000002659.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.20e-09	38.2	773	817

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C+vC++gge    l++CekC ++fH  C+ ++  +++p+ e wiC+ Cr
   Q: 773  DWCAVCQNGGE----LLCCEKCPKVFHLSCHVPT-LTNFPSGE-WICTFCR 817
           79*********....*******************.*******8.******8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

TCAVCHQNIQ SRAPKLLPCL HSFCQRCLPA PQRYLMLPAP MLGSAETPPP VPAPGSPVSG 60
SSPFATQVGV IRCPVCSQEC AERHIIDNFF VKDTTEVPSS TVEKSNQVCT SCEDNAEANG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTGCGCCG TGTGCCACCA GAACATCCAG AGCCGGGCGC CCAAGCTGCT GCCCTGCCTG 60
CACTCCTTCT GCCAGCGCTG CCTGCCCGCG CCCCAGCGCT ACCTCATGTT GCCGGCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003649--Bbox_C
IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR019786--Zinc_finger_PHD-type_CS
IPR000315--Znf_B-box
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS50119--ZF_BBOX
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF00643--zf-B_box

PRINTS

PR00503--BROMODOMAIN

SMART

SM00502--BBC
SM00336--BBOX
SM00297--BROMO
SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005719--C:nuclear euchromatin
GO:0005654--C:nucleoplasm
GO:0005726--C:perichromatin fibrils
GO:0003682--F:chromatin binding
GO:0034056--F:estrogen response element binding
GO:0004672--F:protein kinase activity
GO:0043565--F:sequence-specific DNA binding
GO:0003713--F:transcription coactivator activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0055074--P:calcium ion homeostasis
GO:0071391--P:cellular response to estrogen stimulus
GO:0008285--P:negative regulation of cell proliferation
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0046777--P:protein autophosphorylation
GO:0030163--P:protein catabolic process
GO:0042981--P:regulation of apoptotic process
GO:0031647--P:regulation of protein stability
GO:1901796--P:regulation of signal transduction by p53 class mediator
GO:0070562--P:regulation of vitamin D receptor signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001838	Ailuropoda melanoleuca	96.79	0.00e+00	1682.00
IUUC-Apl-003697	Anas platyrhynchos	81.11	0.00e+00	1325.00
IUUC-Bta-013282	Bos taurus	96.30	0.00e+00	1680.00
IUUC-Cja-018920	Callithrix jacchus	96.39	0.00e+00	1716.00
IUUC-Cfa-020984	Canis familiaris	97.19	0.00e+00	1701.00
IUUC-Cpo-022035	Cavia porcellus	95.91	0.00e+00	1639.00
IUUC-Csa-024208	Chlorocebus sabaeus	97.29	0.00e+00	1722.00
IUUC-Cho-024413	Choloepus hoffmanni	65.34	1.00e-163	570.00
IUUC-Dre-027797	Danio rerio	55.98	1.00e-137	483.00
IUUC-Dno-029145	Dasypus novemcinctus	96.77	0.00e+00	1657.00
IUUC-Dor-030396	Dipodomys ordii	94.19	0.00e+00	1261.00
IUUC-Dme-032143	Drosophila melanogaster	28.14	5.00e-40	159.00
IUUC-Ete-032414	Echinops telfairi	86.98	0.00e+00	919.00
IUUC-Eca-033489	Equus caballus	97.52	0.00e+00	1607.00
IUUC-Eeu-034654	Erinaceus europaeus	94.05	0.00e+00	766.00
IUUC-Fca-035844	Felis catus	93.34	0.00e+00	1470.00
IUUC-Fal-036735	Ficedula albicollis	80.74	0.00e+00	1342.00
IUUC-Gmo-039353	Gadus morhua	55.47	7.00e-123	435.00
IUUC-Gga-041124	Gallus gallus	78.80	0.00e+00	1357.00
IUUC-Ggo-044542	Gorilla gorilla	97.39	0.00e+00	1721.00
IUUC-Hsa-046785	Homo sapiens	97.29	0.00e+00	1720.00
IUUC-Hvu-047073	Hordeum vulgare	51.02	5.00e-12	67.00
IUUC-Lch-050411	Latimeria chalumnae	47.65	0.00e+00	780.00
IUUC-Laf-054279	Loxodonta africana	93.68	0.00e+00	1673.00
IUUC-Mcc-055668	Macaca mulatta	97.29	0.00e+00	1722.00
IUUC-Meu-056195	Macropus eugenii	78.33	0.00e+00	833.00
IUUC-Mga-059272	Meleagris gallopavo	80.47	0.00e+00	1310.00
IUUC-Mmr-060936	Microcebus murinus	95.98	0.00e+00	1688.00
IUUC-Mdo-062848	Monodelphis domestica	88.89	0.00e+00	1577.00
IUUC-Mmu-063598	Mus musculus	93.91	0.00e+00	1659.00
IUUC-Mpu-066272	Mustela putorius furo	96.88	0.00e+00	1611.00
IUUC-Mlu-067958	Myotis lucifugus	94.95	0.00e+00	1597.00
IUUC-Nle-069375	Nomascus leucogenys	97.39	0.00e+00	1722.00
IUUC-Opr-070836	Ochotona princeps	81.86	0.00e+00	663.00
IUUC-Ont-071586	Oreochromis niloticus	53.79	1.00e-131	464.00
IUUC-Oan-073393	Ornithorhynchus anatinus	81.05	0.00e+00	1024.00
IUUC-Ocu-074873	Oryctolagus cuniculus	94.97	0.00e+00	1595.00
IUUC-Ola-086481	Oryzias latipes	52.36	3.00e-125	443.00
IUUC-Oga-088692	Otolemur garnettii	96.18	0.00e+00	1675.00
IUUC-Oar-090160	Ovis aries	96.77	0.00e+00	1588.00
IUUC-Ptr-090756	Pan troglodytes	97.29	0.00e+00	1720.00
IUUC-Pan-091719	Papio anubis	97.19	0.00e+00	1717.00
IUUC-Psi-093433	Pelodiscus sinensis	82.21	0.00e+00	1372.00
IUUC-Pma-094506	Petromyzon marinus	60.61	1.00e-50	191.00
IUUC-Pfo-097104	Poecilia formosa	55.32	2.00e-125	443.00
IUUC-Pab-098599	Pongo abelii	95.98	0.00e+00	1692.00
IUUC-Pca-100540	Procavia capensis	88.43	0.00e+00	969.00
IUUC-Pva-102478	Pteropus vampyrus	89.96	0.00e+00	1517.00
IUUC-Rno-105478	Rattus norvegicus	78.53	0.00e+00	660.00
IUUC-Sha-106740	Sarcophilus harrisii	85.29	0.00e+00	1409.00
IUUC-Sar-113615	Sorex araneus	94.87	0.00e+00	1398.00
IUUC-Ssc-115424	Sus scrofa	63.18	5.00e-153	534.00
IUUC-Tgu-117368	Taeniopygia guttata	78.23	0.00e+00	1371.00
IUUC-Tru-118728	Takifugu rubripes	54.10	4.00e-129	455.00
IUUC-Tsy-118904	Tarsius syrichta	96.55	0.00e+00	1617.00
IUUC-Tbe-127354	Tupaia belangeri	84.07	0.00e+00	726.00
IUUC-Ttr-128983	Tursiops truncatus	91.74	0.00e+00	1179.00
IUUC-Vpa-130420	Vicugna pacos	94.72	0.00e+00	1565.00
IUUC-Xtr-132822	Xenopus tropicalis	64.01	0.00e+00	1033.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence