iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135390

Ensembl Protein ID

Zm00001d040411_T002

UniProt Accession

B4F8E8; B4F8E8_MAIZE

Genbank Protein ID

ACF78391.1; ACF84963.1; ACN25645.1; ACN28675.1; ACN34483.1; ONM31299.1

Protein Name

Rhomboid-like protein 20

Genbank Nucleotide ID

BT033386; BT039958; BT060948; BT063978; BT067586; CM007649

Gene Name

ZEAMMB73_Zm00001d040411

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d040411	Zm00001d040411_T006	Zm00001d040411_T006
Zm00001d040411	Zm00001d040411_T003	Zm00001d040411_T003
Zm00001d040411	Zm00001d040411_T001	Zm00001d040411_T001
Zm00001d040411	Zm00001d040411_T010	Zm00001d040411_T010
Zm00001d040411	Zm00001d040411_T002	Zm00001d040411_T002
Zm00001d040411	Zm00001d040411_T004	Zm00001d040411_T004

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	62.59	4.00e-89	324.00	IUUC-Ath-007083
UBD/Alpha-Helix/UBA	25.16	9.00e-10	58.50	IUUC-Spo-108285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Zea mays

Protein Sequence
(Fasta)

MQGGVSGFQN APVTRAVVVA SGLLSVVFSA QRRARALGIS YQDTITNFRL WKIFPSVFAF 60
QSTPELMFGL YLLYYFRVFE RQIGSNKYSV FCLFTITASS LLEILSLVIL KDTNYISTLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCAGCCCA ACCAACCAGG CACCAGGCAA CTACCACCAC CGTCTCAACA CGACAACACC 60
CGTCTGGCCG TCTCGCCACG CTCGTCCGGC AGTCTCCTAC CGGGCTCCGT CCCGTCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002884	Amborella trichopoda	58.85	1.00e-63	234.00
IUUC-Aly-006411	Arabidopsis lyrata	62.59	1.00e-94	338.00
IUUC-Ath-007083	Arabidopsis thaliana	64.43	6.00e-100	356.00
IUUC-Bgr-012021	Blumeria graminis	28.71	9.00e-14	70.10
IUUC-Bci-013918	Botrytis cinerea	28.91	2.00e-16	78.60
IUUC-Bdi-014098	Brachypodium distachyon	86.55	3.00e-117	414.00
IUUC-Bol-015531	Brassica oleracea	57.19	2.00e-84	305.00
IUUC-Bra-017340	Brassica rapa	62.71	6.00e-92	329.00
IUUC-Cre-022898	Chlamydomonas reinhardtii	38.46	5.00e-26	110.00
IUUC-Dse-031426	Dothistroma septosporum	30.00	2.00e-11	62.00
IUUC-Ete-032599	Echinops telfairi	26.98	5.00e-13	68.20
IUUC-Fox-037932	Fusarium oxysporum	26.13	9.00e-14	70.10
IUUC-Fso-038343	Fusarium solani	28.14	2.00e-11	62.40
IUUC-Ggr-039926	Gaeumannomyces graminis	27.67	4.00e-14	71.20
IUUC-Gac-041765	Gasterosteus aculeatus	28.05	2.00e-14	72.80
IUUC-Gma-043400	Glycine max	61.84	5.00e-97	346.00
IUUC-Hvu-047737	Hordeum vulgare	84.83	4.00e-127	446.00
IUUC-Itr-048679	Ictidomys tridecemlineatus	33.04	2.00e-08	51.20
IUUC-Lpe-050798	Leersia perrieri	82.07	5.00e-112	396.00
IUUC-Mor-057083	Magnaporthe oryzae	24.64	7.00e-11	60.50
IUUC-Mpo-057326	Magnaporthe poae	28.64	2.00e-13	69.30
IUUC-Mtr-057918	Medicago truncatula	60.75	1.00e-99	355.00
IUUC-Mla-058868	Melampsora laricipopulina	26.97	6.00e-11	60.80
IUUC-Mac-065255	Musa acuminata	59.45	3.00e-94	337.00
IUUC-Mlu-067419	Myotis lucifugus	26.48	2.00e-11	61.60
IUUC-Ncr-068703	Neurospora crassa	26.89	1.00e-14	72.80
IUUC-Oba-075447	Oryza barthii	82.53	1.00e-124	438.00
IUUC-Obr-076812	Oryza brachyantha	82.88	1.00e-114	405.00
IUUC-Ogu-078221	Oryza glumaepatula	82.88	1.00e-116	411.00
IUUC-Oin-080171	Oryza indica	76.10	2.00e-112	398.00
IUUC-Ome-081856	Oryza meridionalis	81.51	7.00e-110	389.00
IUUC-Oni-082795	Oryza nivara	82.88	2.00e-116	411.00
IUUC-Opu-083755	Oryza punctata	82.53	1.00e-111	395.00
IUUC-Oru-084198	Oryza rufipogon	82.88	2.00e-116	411.00
IUUC-Osa-085870	Oryza sativa	82.88	2.00e-116	411.00
IUUC-Olu-087791	Ostreococcus lucimarinus	30.96	2.00e-15	75.50
IUUC-Ppa-095918	Physcomitrella patens	54.45	4.00e-77	280.00
IUUC-Pfo-096398	Poecilia formosa	26.35	2.00e-14	72.80
IUUC-Pop-098933	Populus trichocarpa	61.43	2.00e-98	351.00
IUUC-Ppe-101164	Prunus persica	64.51	3.00e-106	377.00
IUUC-Pgr-103488	Puccinia graminis	25.91	2.00e-11	62.00
IUUC-Pte-104413	Pyrenophora teres	27.59	1.00e-05	43.50
IUUC-Pyt-104659	Pyrenophora triticirepentis	27.59	1.00e-05	42.70
IUUC-Sja-107960	Schizosaccharomyces japonicus	22.44	9.00e-12	63.50
IUUC-Spo-108285	Schizosaccharomyces pombe	25.16	3.00e-12	65.50
IUUC-Ssl-108440	Sclerotinia sclerotiorum	28.18	3.00e-18	85.10
IUUC-Smo-108945	Selaginella moellendorffii	53.47	9.00e-65	239.00
IUUC-Sit-109805	Setaria italica	94.86	2.00e-133	467.00
IUUC-Sly-111445	Solanum lycopersicum	57.29	7.00e-90	322.00
IUUC-Stu-112541	Solanum tuberosum	58.31	3.00e-90	324.00
IUUC-Sbi-113948	Sorghum bicolor	97.60	7.00e-140	489.00
IUUC-Tru-118110	Takifugu rubripes	26.78	5.00e-18	84.70
IUUC-Tni-119811	Tetraodon nigroviridis	30.04	8.00e-21	94.00
IUUC-Tca-121053	Theobroma cacao	62.93	4.00e-98	350.00
IUUC-Tre-122152	Trichoderma reesei	29.41	2.00e-13	69.30
IUUC-Tvi-122334	Trichoderma virens	27.72	3.00e-13	68.60
IUUC-Tae-124575	Triticum aestivum	84.48	2.00e-126	444.00
IUUC-Tur-126165	Triticum urartu	85.56	4.00e-78	283.00
IUUC-Tme-127059	Tuber melanosporum	27.19	1.00e-16	79.30
IUUC-Tbe-127867	Tupaia belangeri	41.94	8.00e-06	44.30
IUUC-Uma-129462	Ustilago maydis	23.72	2.00e-10	59.30
IUUC-Vda-129740	Verticillium dahliae	26.19	4.00e-13	67.80
IUUC-Vvi-131299	Vitis vinifera	64.07	1.00e-102	365.00
IUUC-Xtr-132867	Xenopus tropicalis	28.45	5.00e-19	88.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence