iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022170

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02042209

Gene Name

WDR88

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000002480.3	ENSCPOT00000002513.2	ENSCPOP00000002259.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-41	137.2	97	134
UBD/Beta-Prp	2.00e-55	188.0	220	390

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f  +dt l+sGs+D+t+k+WD+ +g+++
   Q: 97   GHEHIVSSCHFcvNDTKLLSGSYDCTVKLWDPVDGTVI 134
           8***********999*****************999876 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdls......tg 84
           k ++ghh+  i + +f pd++ +a+ s d++ik+wdvt++ ++ s+   he++ + ++f  +g +l t+s D+ +k+w++        g
   Q: 220  KYIEGHHQRSIMACCFDPDSQKVASVSLDRCIKIWDVTSQATVLSIpRAHESGLSNCCFTFSGHFLCTASWDKSLKIWNVYtgefrnRG 308
           5689***************************************9999*******************************98878888899 PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
            cv  ++ghe sv s+ f +++++l+sG+ d+t+ +wd+ +g+     l+gh+++v+ v+++ d++ + s+s+Drt+rlW+++
   Q: 309  ACVTLMQGHEGSVSSCCFARDSSFLISGGFDKTVAIWDVAEGYQKL-SLKGHKDWVMDVAISNDKKWILSASKDRTMRLWNIE 390
           9*********************************************.**********************************93 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MASPPPDSQK TWAENPKGML AVQSLSPHGV PWATVVTAVS HFRMSLPALR RDQLLASLDP 60
LALNKYSLPS VQHPTMPQAL WGDQEPLSKI PLKILRGHEH IVSSCHFCVN DTKLLSGSYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTCGC CGCCGCCGGA CTCCCAGAAA ACCTGGGCCG AGAACCCGAA GGGGATGCTC 60
GCGGTCCAGT CGCTCTCGCC CCACGGGGTG CCCTGGGCCA CCGTGGTGAC AGCCGTGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001328	Ailuropoda melanoleuca	77.56	2.00e-149	521.00
IUUC-Apl-003571	Anas platyrhynchos	56.15	5.00e-122	430.00
IUUC-Aca-005232	Anolis carolinensis	49.00	1.00e-77	282.00
IUUC-Ame-011833	Astyanax mexicanus	49.74	5.00e-55	206.00
IUUC-Bta-013562	Bos taurus	71.10	2.00e-175	608.00
IUUC-Cja-019202	Callithrix jacchus	72.36	0.00e+00	660.00
IUUC-Cfa-021095	Canis familiaris	67.63	1.00e-179	622.00
IUUC-Csa-024218	Chlorocebus sabaeus	78.29	0.00e+00	678.00
IUUC-Cho-024561	Choloepus hoffmanni	74.33	2.00e-121	428.00
IUUC-Dno-029722	Dasypus novemcinctus	72.86	2.00e-152	531.00
IUUC-Dor-030464	Dipodomys ordii	67.70	3.00e-133	467.00
IUUC-Ete-032931	Echinops telfairi	63.46	3.00e-114	404.00
IUUC-Eca-034428	Equus caballus	78.00	3.00e-170	590.00
IUUC-Eeu-034568	Erinaceus europaeus	57.73	3.00e-108	384.00
IUUC-Fca-035707	Felis catus	70.87	5.00e-174	603.00
IUUC-Gmo-039646	Gadus morhua	44.69	5.00e-72	264.00
IUUC-Gga-040710	Gallus gallus	55.30	2.00e-116	412.00
IUUC-Ggo-044611	Gorilla gorilla	46.40	1.00e-100	359.00
IUUC-Hsa-046138	Homo sapiens	72.75	0.00e+00	677.00
IUUC-Itr-048283	Ictidomys tridecemlineatus	64.71	1.00e-166	579.00
IUUC-Lch-050329	Latimeria chalumnae	50.86	5.00e-109	387.00
IUUC-Loc-052876	Lepisosteus oculatus	39.64	9.00e-35	139.00
IUUC-Laf-053777	Loxodonta africana	71.84	6.00e-180	623.00
IUUC-Mcc-055771	Macaca mulatta	77.91	0.00e+00	675.00
IUUC-Meu-056584	Macropus eugenii	46.47	5.00e-83	300.00
IUUC-Mga-059818	Meleagris gallopavo	54.07	1.00e-122	432.00
IUUC-Mmr-060639	Microcebus murinus	73.68	1.00e-157	549.00
IUUC-Mdo-062321	Monodelphis domestica	56.32	3.00e-135	474.00
IUUC-Mpu-066849	Mustela putorius furo	71.57	2.00e-172	598.00
IUUC-Mlu-067238	Myotis lucifugus	66.51	4.00e-166	577.00
IUUC-Ont-071230	Oreochromis niloticus	42.19	4.00e-79	288.00
IUUC-Oan-072698	Ornithorhynchus anatinus	58.42	1.00e-141	495.00
IUUC-Ocu-074219	Oryctolagus cuniculus	76.41	2.00e-174	605.00
IUUC-Oga-087913	Otolemur garnettii	69.34	9.00e-178	616.00
IUUC-Oar-089977	Ovis aries	70.63	1.00e-172	599.00
IUUC-Ptr-090876	Pan troglodytes	73.42	0.00e+00	682.00
IUUC-Pan-091936	Papio anubis	82.89	9.00e-116	409.00
IUUC-Psi-093015	Pelodiscus sinensis	51.60	2.00e-75	275.00
IUUC-Pma-094552	Petromyzon marinus	32.77	2.00e-30	124.00
IUUC-Pfo-096240	Poecilia formosa	42.12	1.00e-73	271.00
IUUC-Pab-097983	Pongo abelii	64.86	7.00e-168	583.00
IUUC-Pca-100752	Procavia capensis	59.27	7.00e-137	480.00
IUUC-Pva-102199	Pteropus vampyrus	68.46	9.00e-165	573.00
IUUC-Rno-106062	Rattus norvegicus	68.86	9.00e-175	606.00
IUUC-Sar-113167	Sorex araneus	50.36	5.00e-35	141.00
IUUC-Ssc-116089	Sus scrofa	72.22	1.00e-170	592.00
IUUC-Tbe-127860	Tupaia belangeri	63.66	5.00e-164	570.00
IUUC-Ttr-129152	Tursiops truncatus	72.11	9.00e-165	572.00
IUUC-Vpa-130745	Vicugna pacos	63.17	5.00e-163	567.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence