iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014158

UUCD1 version

UUC-BrD-00972

Ensembl Protein ID

BRADI1G16170.3

UniProt Accession

I1GQS4; I1GQS4_BRADI

Genbank Protein ID

KQK14427.1; KQK14428.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880; CM000880

Gene Name

BRADI_1g16170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G16170	BRADI1G16170.3	BRADI1G16170.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	35.7	39	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadCl..qkw.....pglknssskefrCPlCr 46
           C+iC+e+f   ++ p+vl CgH+++++C+   +w     p  + +   + +CP+C+
   Q: 39   CPICWESFnivENVPYVLWCGHTMCKNCIlgLQWavtkvPTVPIQLPFFVSCPWCN 94
           ********999999***************9999999999999988999999****7 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MWSFPSLGKK NPPNFTFSNA DCSDDEVSSC TSREEGLECP ICWESFNIVE NVPYVLWCGH 60
TMCKNCILGL QWAVTKVPTV PIQLPFFVSC PWCNLLSLRI IYKGNLTFPR KNYFLLWMVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGAGTT TTCCGTCTTT GGGGAAGAAG AACCCTCCAA ATTTCACCTT TTCCAATGCT 60
GATTGTTCAG ATGACGAGGT ATCTTCGTGC ACAAGCAGGG AAGAAGGCCT CGAATGCCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

bdi:100833943

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002488	Amborella trichopoda	62.56	2.00e-75	274.00
IUUC-Aca-004404	Anolis carolinensis	29.73	3.00e-06	44.70
IUUC-Lpe-051412	Leersia perrieri	83.52	5.00e-121	426.00
IUUC-Mtr-057842	Medicago truncatula	62.22	9.00e-90	322.00
IUUC-Mac-064923	Musa acuminata	67.39	1.00e-71	262.00
IUUC-Oba-075020	Oryza barthii	83.90	1.00e-121	427.00
IUUC-Ogl-077905	Oryza glaberrima	83.90	1.00e-121	427.00
IUUC-Ogu-078854	Oryza glumaepatula	84.27	5.00e-122	429.00
IUUC-Oin-079896	Oryza indica	83.90	7.00e-122	429.00
IUUC-Olo-080692	Oryza longistaminata	83.52	1.00e-120	424.00
IUUC-Oni-082962	Oryza nivara	84.27	5.00e-122	429.00
IUUC-Opu-084174	Oryza punctata	83.52	3.00e-120	423.00
IUUC-Oru-084363	Oryza rufipogon	83.90	3.00e-121	426.00
IUUC-Osa-085569	Oryza sativa	83.90	3.00e-121	426.00
IUUC-Ola-087099	Oryzias latipes	36.51	1.00e-04	40.40
IUUC-Ppa-095340	Physcomitrella patens	44.30	3.00e-50	191.00
IUUC-Pop-100053	Populus trichocarpa	66.25	7.00e-78	282.00
IUUC-Smo-109392	Selaginella moellendorffii	36.64	4.00e-33	134.00
IUUC-Sit-109790	Setaria italica	80.52	3.00e-114	403.00
IUUC-Sly-111787	Solanum lycopersicum	64.04	1.00e-92	331.00
IUUC-Stu-112131	Solanum tuberosum	64.04	3.00e-94	337.00
IUUC-Sbi-114279	Sorghum bicolor	80.52	8.00e-112	395.00
IUUC-Tbe-127317	Tupaia belangeri	44.44	7.00e-04	39.30
IUUC-Vvi-130901	Vitis vinifera	69.26	3.00e-80	290.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence