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Tag Content
UUCD2 ID IUUC-Gga-040216
UUCD1 version UUC-GaG-00724
Ensembl Protein ID ENSGALP00000023294.5
UniProt Accession F1NH79; F1NH79_CHICK
Genbank Protein ID ENSGALP00000023294
Protein Name Uncharacterized protein
Genbank Nucleotide ID AADN04000389
Gene Name CHD4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000013565.5 ENSGALT00000023339.5 ENSGALP00000023294.5
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 3.50e-16 59.5 444 488
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 444  EFCRVCKDGGE----LLCCDACPSSYHIHCLNPP-LPEIPNGE-WLCPRCT 488
           58*********....*******************.*******8.******6 PP
   
Organism Gallus gallus
Protein Sequence
(Fasta)
MASGIGSPSP CSGGSDDDEM EILLNNAIPQ HQEHEEEPEE ELLSEAETLK IKKKKKPKKL 60
KEPKVPKLSK RQKKELGDSS GEGNEFVEEE EEVLRSDSEG SDYTPGKKKK KKLGPKKEKK 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Gga-040216|E3,PHD|Gallus gallus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGGCGGTGCC GGGTCCGGAG CCATTTTCCC TTCAGCAGCG GCGGCGGTGG AGCGGAGCTG 60
CCGTCTGGAG CCGGGTGAGG ATCTGGGGGG GAACGAGGGC GGGCGCGGCC TCACCGCCGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Gga-040216|E3,PHD|Gallus gallus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N
SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD
Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0016020--C:membrane
GO:0000790--C:nuclear chromatin
GO:0016581--C:NuRD complex
GO:0032993--C:protein-DNA complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0031492--F:nucleosomal DNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980--F:RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001361 Ailuropoda melanoleuca 88.86 0.00e+00 2797.00
IUUC-Apl-004175 Anas platyrhynchos 95.57 0.00e+00 2920.00
IUUC-Aca-004774 Anolis carolinensis 92.27 0.00e+00 2842.00
IUUC-Ame-011098 Astyanax mexicanus 80.03 0.00e+00 2360.00
IUUC-Bta-013220 Bos taurus 90.68 0.00e+00 2771.00
IUUC-Cel-018683 Caenorhabditis elegans 58.47 0.00e+00 1263.00
IUUC-Cja-019510 Callithrix jacchus 84.94 0.00e+00 2489.00
IUUC-Cfa-020422 Canis familiaris 90.53 0.00e+00 2788.00
IUUC-Cpo-021704 Cavia porcellus 91.67 0.00e+00 2755.00
IUUC-Csa-023625 Chlorocebus sabaeus 90.38 0.00e+00 2784.00
IUUC-Cho-024361 Choloepus hoffmanni 87.12 0.00e+00 1415.00
IUUC-Csv-025847 Ciona savignyi 55.92 0.00e+00 1402.00
IUUC-Dre-027505 Danio rerio 83.93 0.00e+00 2075.00
IUUC-Dno-029656 Dasypus novemcinctus 90.16 0.00e+00 2770.00
IUUC-Dor-030354 Dipodomys ordii 92.50 0.00e+00 1823.00
IUUC-Dme-032150 Drosophila melanogaster 62.49 0.00e+00 1403.00
IUUC-Ete-032757 Echinops telfairi 70.24 0.00e+00 1708.00
IUUC-Eca-034112 Equus caballus 90.42 0.00e+00 2791.00
IUUC-Eeu-034777 Erinaceus europaeus 69.42 0.00e+00 1713.00
IUUC-Fca-036056 Felis catus 90.42 0.00e+00 2786.00
IUUC-Fal-037312 Ficedula albicollis 99.28 0.00e+00 2413.00
IUUC-Gmo-038957 Gadus morhua 74.26 0.00e+00 1353.00
IUUC-Gac-042478 Gasterosteus aculeatus 77.75 0.00e+00 2039.00
IUUC-Gma-043999 Glycine max 43.69 0.00e+00 724.00
IUUC-Ggo-044428 Gorilla gorilla 84.11 0.00e+00 2439.00
IUUC-Hsa-045908 Homo sapiens 88.87 0.00e+00 2775.00
IUUC-Itr-048002 Ictidomys tridecemlineatus 90.62 0.00e+00 2782.00
IUUC-Lch-049948 Latimeria chalumnae 79.78 0.00e+00 1907.00
IUUC-Mcc-055773 Macaca mulatta 88.76 0.00e+00 2778.00
IUUC-Meu-056292 Macropus eugenii 64.88 0.00e+00 901.00
IUUC-Mga-059633 Meleagris gallopavo 98.89 0.00e+00 3048.00
IUUC-Mmr-060886 Microcebus murinus 88.87 0.00e+00 2774.00
IUUC-Mdo-062872 Monodelphis domestica 90.01 0.00e+00 2528.00
IUUC-Mmu-063672 Mus musculus 92.50 0.00e+00 2322.00
IUUC-Mpu-066692 Mustela putorius furo 90.48 0.00e+00 2786.00
IUUC-Mlu-067785 Myotis lucifugus 90.53 0.00e+00 2781.00
IUUC-Nle-070039 Nomascus leucogenys 90.17 0.00e+00 2733.00
IUUC-Opr-070960 Ochotona princeps 69.05 0.00e+00 2229.00
IUUC-Ont-072418 Oreochromis niloticus 83.16 0.00e+00 2139.00
IUUC-Ocu-074177 Oryctolagus cuniculus 88.89 0.00e+00 2802.00
IUUC-Ola-086880 Oryzias latipes 82.44 0.00e+00 2172.00
IUUC-Oga-088970 Otolemur garnettii 89.12 0.00e+00 2784.00
IUUC-Oar-090422 Ovis aries 91.96 0.00e+00 2746.00
IUUC-Pan-092441 Papio anubis 90.42 0.00e+00 2788.00
IUUC-Psi-093530 Pelodiscus sinensis 93.15 0.00e+00 2878.00
IUUC-Ppa-095213 Physcomitrella patens 42.41 0.00e+00 719.00
IUUC-Pfo-097530 Poecilia formosa 82.80 0.00e+00 2113.00
IUUC-Pab-097959 Pongo abelii 89.65 0.00e+00 2705.00
IUUC-Pva-103186 Pteropus vampyrus 90.42 0.00e+00 2741.00
IUUC-Rno-105692 Rattus norvegicus 94.03 0.00e+00 2330.00
IUUC-Sha-107233 Sarcophilus harrisii 75.13 0.00e+00 1897.00
IUUC-Sly-110976 Solanum lycopersicum 43.54 0.00e+00 730.00
IUUC-Ssc-115295 Sus scrofa 90.05 0.00e+00 2771.00
IUUC-Tgu-117484 Taeniopygia guttata 97.05 0.00e+00 3016.00
IUUC-Tru-118745 Takifugu rubripes 77.29 0.00e+00 2513.00
IUUC-Tsy-119261 Tarsius syrichta 80.58 0.00e+00 1917.00
IUUC-Tni-120764 Tetraodon nigroviridis 76.96 0.00e+00 2492.00
IUUC-Tbe-128117 Tupaia belangeri 76.22 0.00e+00 984.00
IUUC-Ttr-128478 Tursiops truncatus 86.65 0.00e+00 2586.00
IUUC-Vvi-130849 Vitis vinifera 42.94 0.00e+00 719.00
IUUC-Xtr-132833 Xenopus tropicalis 64.14 0.00e+00 2097.00
Created Date 25-Jun-2017

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