iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oan-072885

Ensembl Protein ID

ENSOANP00000002890.2

UniProt Accession

F7G688; F7G688_ORNAN

Protein Name

Uncharacterized protein

Gene Name

CHD5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOANG00000001819.3	ENSOANT00000002891.2	ENSOANP00000002890.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.60e-18	66.2	336	380

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp+C+
   Q: 336  EFCRVCKDGGE----LLCCDTCPSSYHLHCLNPP-LPEIPNGE-WLCPRCT 380
           58*********....*******************.*******8.******7 PP

Organism

Ornithorhynchus anatinus

Protein Sequence
(Fasta)

MEEKSESEGS DYNPNKKKKK KLKEKKEKKS KRKKKEDDED DNEDGGLKEP KSSAQLMEEW 60
GLDDVDYAFS EEDYHTLTNY KAFSQFLRPL IAKKNPKIPM SKMMTVLGAK WREFSANNPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAACATGCT GCCAGGGTCT TCCTGCTGGC CTCAGGTTGA AGTGATTGTC ATGCAGGACC 60
TGGTGGAACC ACGGCTCTGG GCCGGCTGGT TCTTGTTTCC CAGAGGGTGG GGAGGGGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012957--CHD_C2
IPR012958--CHD_N
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0016607--C:nuclear speck
GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0098532--P:histone H3-K27 trimethylation
GO:0060850--P:regulation of transcription involved in cell fate commitment
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001701	Ailuropoda melanoleuca	78.33	0.00e+00	1731.00
IUUC-Apl-003406	Anas platyrhynchos	83.41	0.00e+00	1299.00
IUUC-Aca-004560	Anolis carolinensis	74.39	0.00e+00	1145.00
IUUC-Aly-005645	Arabidopsis lyrata	38.56	2.00e-111	397.00
IUUC-Ath-007406	Arabidopsis thaliana	40.32	7.00e-118	419.00
IUUC-Ame-011883	Astyanax mexicanus	65.05	0.00e+00	1971.00
IUUC-Bta-012868	Bos taurus	59.50	0.00e+00	1867.00
IUUC-Bol-016073	Brassica oleracea	41.00	2.00e-116	414.00
IUUC-Bra-016724	Brassica rapa	41.30	3.00e-117	417.00
IUUC-Cel-018108	Caenorhabditis elegans	58.04	0.00e+00	879.00
IUUC-Cja-019018	Callithrix jacchus	61.40	0.00e+00	1877.00
IUUC-Cfa-021063	Canis familiaris	79.10	0.00e+00	1706.00
IUUC-Cpo-022083	Cavia porcellus	78.30	0.00e+00	917.00
IUUC-Csa-023084	Chlorocebus sabaeus	78.49	0.00e+00	1699.00
IUUC-Cho-024361	Choloepus hoffmanni	66.97	0.00e+00	1034.00
IUUC-Csv-025847	Ciona savignyi	59.45	0.00e+00	892.00
IUUC-Dre-027692	Danio rerio	73.22	0.00e+00	1146.00
IUUC-Dno-029656	Dasypus novemcinctus	65.12	0.00e+00	1347.00
IUUC-Dor-030167	Dipodomys ordii	63.73	0.00e+00	1486.00
IUUC-Dme-032150	Drosophila melanogaster	62.98	0.00e+00	936.00
IUUC-Ete-032757	Echinops telfairi	61.28	0.00e+00	1218.00
IUUC-Eca-034372	Equus caballus	77.06	0.00e+00	933.00
IUUC-Eeu-034777	Erinaceus europaeus	59.07	0.00e+00	1291.00
IUUC-Fca-036043	Felis catus	61.20	0.00e+00	1865.00
IUUC-Fal-037282	Ficedula albicollis	78.47	0.00e+00	1739.00
IUUC-Gmo-038957	Gadus morhua	68.13	0.00e+00	1051.00
IUUC-Gga-040607	Gallus gallus	79.38	0.00e+00	1622.00
IUUC-Gac-042478	Gasterosteus aculeatus	57.52	0.00e+00	1360.00
IUUC-Gma-043999	Glycine max	43.73	5.00e-157	548.00
IUUC-Ggo-044514	Gorilla gorilla	78.72	0.00e+00	1704.00
IUUC-Hsa-045916	Homo sapiens	65.00	0.00e+00	1484.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	62.77	0.00e+00	1856.00
IUUC-Lch-050343	Latimeria chalumnae	59.52	0.00e+00	1088.00
IUUC-Loc-052795	Lepisosteus oculatus	67.86	0.00e+00	2116.00
IUUC-Laf-053749	Loxodonta africana	83.91	0.00e+00	1296.00
IUUC-Mcc-055856	Macaca mulatta	78.84	0.00e+00	1690.00
IUUC-Meu-056050	Macropus eugenii	70.66	3.00e-169	589.00
IUUC-Mga-059630	Meleagris gallopavo	77.98	0.00e+00	1763.00
IUUC-Mmr-061223	Microcebus murinus	64.28	0.00e+00	1480.00
IUUC-Mdo-062971	Monodelphis domestica	64.39	0.00e+00	1425.00
IUUC-Mmu-063920	Mus musculus	61.32	0.00e+00	1867.00
IUUC-Mpu-065809	Mustela putorius furo	67.99	0.00e+00	1382.00
IUUC-Mlu-067355	Myotis lucifugus	61.92	0.00e+00	1769.00
IUUC-Nle-069824	Nomascus leucogenys	66.86	0.00e+00	1889.00
IUUC-Opr-070960	Ochotona princeps	59.68	0.00e+00	1827.00
IUUC-Ont-072418	Oreochromis niloticus	73.75	0.00e+00	1118.00
IUUC-Ocu-074438	Oryctolagus cuniculus	58.28	0.00e+00	1761.00
IUUC-Ola-086961	Oryzias latipes	71.59	0.00e+00	1588.00
IUUC-Oga-088374	Otolemur garnettii	59.95	0.00e+00	1866.00
IUUC-Oar-089784	Ovis aries	59.61	0.00e+00	1847.00
IUUC-Ptr-090799	Pan troglodytes	65.00	0.00e+00	1484.00
IUUC-Pan-092282	Papio anubis	79.06	0.00e+00	1679.00
IUUC-Psi-093007	Pelodiscus sinensis	93.41	0.00e+00	793.00
IUUC-Ppa-095213	Physcomitrella patens	52.39	5.00e-129	455.00
IUUC-Pfo-096802	Poecilia formosa	64.94	0.00e+00	1593.00
IUUC-Pab-098174	Pongo abelii	59.23	0.00e+00	1767.00
IUUC-Pca-100559	Procavia capensis	75.48	0.00e+00	1124.00
IUUC-Pva-102508	Pteropus vampyrus	80.43	0.00e+00	1100.00
IUUC-Rno-104884	Rattus norvegicus	60.71	0.00e+00	1819.00
IUUC-Sha-107233	Sarcophilus harrisii	64.61	0.00e+00	1484.00
IUUC-Smo-108946	Selaginella moellendorffii	40.33	6.00e-126	446.00
IUUC-Sly-110976	Solanum lycopersicum	44.07	1.00e-156	547.00
IUUC-Ssc-115751	Sus scrofa	60.13	0.00e+00	1869.00
IUUC-Tgu-116779	Taeniopygia guttata	79.87	0.00e+00	1668.00
IUUC-Tru-118745	Takifugu rubripes	67.90	0.00e+00	1464.00
IUUC-Tsy-119261	Tarsius syrichta	66.51	0.00e+00	989.00
IUUC-Tni-120796	Tetraodon nigroviridis	60.36	0.00e+00	1220.00
IUUC-Tbe-128117	Tupaia belangeri	60.81	0.00e+00	702.00
IUUC-Ttr-128301	Tursiops truncatus	79.27	0.00e+00	1714.00
IUUC-Vpa-130209	Vicugna pacos	80.13	3.00e-138	486.00
IUUC-Vvi-130849	Vitis vinifera	43.48	1.00e-157	550.00
IUUC-Xtr-132668	Xenopus tropicalis	68.24	0.00e+00	1655.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence