iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pfo-096265

Ensembl Protein ID

ENSPFOP00000012650.2

UniProt Accession

A0A087Y3P7; A0A087Y3P7_POEFO

Genbank Protein ID

ENSPFOP00000012650

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AYCK01004416

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPFOG00000012464.2	ENSPFOT00000012667.2	ENSPFOP00000012650.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.00e-17	62.2	389	434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl+++  ++ p+ + w Cp C++
   Q: 389  DYCEVCQQGGE----IILCDTCPRAYHLVCLEPE-LDKAPEGK-WSCPHCEK 434
           79*********....9******************.*******7.******86 PP

Organism

Poecilia formosa

Protein Sequence
(Fasta)

MSSPLRSCEE DEGMVVNSEG GDFDEEDDED DGELDENASD INSPAAPRET ATPPAAPDED 60
PEISDREVPC KKKGRPKKKK DTKKKEKEGK PAKTKKRKKI DSDVERISDR ERDYGENSDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGGAGGGG GGGGGGCAGA CCGAGAAGAA ACAAACAAGT AACAATGTAA CTTACATGCA 60
CTCACACACC CCTTTTTTCC TTGTAACAAT GTGTACGTTT TTAACGAGGG AGGGGGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028722--CHD3
IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR009057--Homeobox-like
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR011991--WHTH_DNA-bd_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0007417--P:central nervous system development
GO:0051297--P:centrosome organization
GO:0006325--P:chromatin organization
GO:0048589--P:developmental growth
GO:0006355--P:regulation of transcription, DNA-templated
GO:0007051--P:spindle organization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004560	Anolis carolinensis	79.23	0.00e+00	2004.00
IUUC-Aly-005645	Arabidopsis lyrata	42.35	3.00e-152	534.00
IUUC-Ath-007406	Arabidopsis thaliana	40.97	7.00e-157	549.00
IUUC-Ame-011352	Astyanax mexicanus	84.98	0.00e+00	2251.00
IUUC-Bta-012868	Bos taurus	76.12	0.00e+00	2288.00
IUUC-Bol-016073	Brassica oleracea	41.36	4.00e-160	560.00
IUUC-Bra-016724	Brassica rapa	41.47	2.00e-160	561.00
IUUC-Cfa-021055	Canis familiaris	76.04	0.00e+00	2283.00
IUUC-Cpo-021523	Cavia porcellus	75.54	0.00e+00	2291.00
IUUC-Dre-028043	Danio rerio	85.09	0.00e+00	2199.00
IUUC-Fca-036043	Felis catus	75.28	0.00e+00	2273.00
IUUC-Gmo-038957	Gadus morhua	85.77	0.00e+00	1574.00
IUUC-Gac-041375	Gasterosteus aculeatus	80.34	0.00e+00	2891.00
IUUC-Ggo-045538	Gorilla gorilla	76.02	0.00e+00	2284.00
IUUC-Itr-048463	Ictidomys tridecemlineatus	75.73	0.00e+00	2293.00
IUUC-Lch-050343	Latimeria chalumnae	76.85	0.00e+00	1988.00
IUUC-Loc-052383	Lepisosteus oculatus	81.80	0.00e+00	2153.00
IUUC-Laf-053870	Loxodonta africana	76.34	0.00e+00	2276.00
IUUC-Mlu-067355	Myotis lucifugus	76.05	0.00e+00	2299.00
IUUC-Opr-070960	Ochotona princeps	74.93	0.00e+00	2255.00
IUUC-Ont-072235	Oreochromis niloticus	90.04	0.00e+00	3019.00
IUUC-Ocu-074438	Oryctolagus cuniculus	71.69	0.00e+00	2142.00
IUUC-Ola-086491	Oryzias latipes	74.95	0.00e+00	2683.00
IUUC-Oar-089784	Ovis aries	75.85	0.00e+00	2268.00
IUUC-Rno-104884	Rattus norvegicus	76.23	0.00e+00	2279.00
IUUC-Smo-108946	Selaginella moellendorffii	39.21	7.00e-158	552.00
IUUC-Ssc-115751	Sus scrofa	76.67	0.00e+00	2291.00
IUUC-Tni-120039	Tetraodon nigroviridis	90.25	0.00e+00	2459.00
IUUC-Tbe-128117	Tupaia belangeri	76.27	0.00e+00	1006.00
IUUC-Vpa-130209	Vicugna pacos	89.47	1.00e-164	575.00
IUUC-Xtr-132833	Xenopus tropicalis	66.95	0.00e+00	2221.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence