iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000319

Ensembl Protein ID

EMT09848

UniProt Accession

M8C3Y9; M8C3Y9_AEGTA

Genbank Protein ID

EMT09848.1

Protein Name

Putative splicing factor 3 subunit 1

Genbank Nucleotide ID

KD561437

Gene Name

F775_08849

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_08849	EMT09848	EMT09848

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	5.30e-13	49.4	565	632

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 10   gseltlkv.npsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekksgg 76
           g +l+++v + sdtV+ LKe+i ++l +p+++q+L ++   L+d+ +La+y++ +g +i l ++++gg
   Q: 565  GQVLEISVqSLSDTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLSLAYYNVGPGVVINLALRERGG 632
           5677777658889**************************************************99875 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MKMCYQLPKP LAQRLAELYT VRLPEGITTE EVDIVKLTAQ FVARNGKTFL ASLASRESTN 60
PQFNFLRPTH SMFPFFTALA DIYSRVMRPD EGVAALMRDL KEGTKDLTTV LERCLNRLEW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAATGT GCTACCAATT ACCAAAGCCT CTGGCACAAC GACTGGTACT GACTCGAGCC 60
GAGTCGGCCG ACCNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR022030--SF3A1
IPR000061--Surp
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50128--SURP
PS50053--UBIQUITIN_2

Pfam

PF12230--PRP21_like_P
PF01805--Surp
PF00240--ubiquitin

SMART

SM00648--SWAP
SM00213--UBQ

Gene Ontology

GO:0003723--F:RNA binding
GO:0006396--P:RNA processing

KEGG

ats:F775_08849

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002416	Ailuropoda melanoleuca	42.77	6.00e-31	128.00
IUUC-Atr-003001	Amborella trichopoda	69.58	7.00e-134	470.00
IUUC-Apl-003584	Anas platyrhynchos	44.52	1.00e-26	114.00
IUUC-Aca-004690	Anolis carolinensis	45.16	9.00e-31	128.00
IUUC-Aly-005487	Arabidopsis lyrata	69.86	4.00e-131	461.00
IUUC-Ath-007275	Arabidopsis thaliana	67.45	8.00e-133	467.00
IUUC-Acl-008320	Aspergillus clavatus	41.18	3.00e-20	92.40
IUUC-Afl-008707	Aspergillus flavus	42.77	2.00e-26	113.00
IUUC-Afu-008786	Aspergillus fumigatus	43.29	1.00e-27	117.00
IUUC-Ani-009307	Aspergillus nidulans	44.51	1.00e-28	120.00
IUUC-Ang-009761	Aspergillus niger	43.64	9.00e-28	117.00
IUUC-Aor-010067	Aspergillus oryzae	42.77	2.00e-26	113.00
IUUC-Ate-010515	Aspergillus terreus	43.03	1.00e-27	117.00
IUUC-Ame-011842	Astyanax mexicanus	44.44	5.00e-31	129.00
IUUC-Bgr-012204	Blumeria graminis	40.72	2.00e-26	112.00
IUUC-Bta-013525	Bos taurus	42.77	6.00e-31	128.00
IUUC-Bci-013842	Botrytis cinerea	40.36	3.00e-23	102.00
IUUC-Bdi-014436	Brachypodium distachyon	88.73	0.00e+00	929.00
IUUC-Bol-015186	Brassica oleracea	68.68	6.00e-128	451.00
IUUC-Bra-017856	Brassica rapa	59.05	9.00e-129	453.00
IUUC-Cel-018261	Caenorhabditis elegans	33.14	7.00e-37	148.00
IUUC-Cja-018989	Callithrix jacchus	42.77	7.00e-31	128.00
IUUC-Cfa-020629	Canis familiaris	42.77	6.00e-31	128.00
IUUC-Cpo-021759	Cavia porcellus	42.77	7.00e-31	128.00
IUUC-Cre-022603	Chlamydomonas reinhardtii	47.89	9.00e-27	113.00
IUUC-Csa-023750	Chlorocebus sabaeus	42.77	6.00e-31	128.00
IUUC-Cho-024581	Choloepus hoffmanni	45.32	7.00e-28	118.00
IUUC-Cin-025640	Ciona intestinalis	43.45	5.00e-35	142.00
IUUC-Csv-025855	Ciona savignyi	42.53	2.00e-35	144.00
IUUC-Cgl-026573	Colletotrichum gloeosporioides	38.32	2.00e-22	99.80
IUUC-Cne-026952	Cryptococcus neoformans	36.99	2.00e-22	100.00
IUUC-Dre-028055	Danio rerio	35.26	2.00e-42	166.00
IUUC-Dno-029259	Dasypus novemcinctus	42.77	5.00e-31	129.00
IUUC-Dor-031081	Dipodomys ordii	43.83	4.00e-30	125.00
IUUC-Dse-031438	Dothistroma septosporum	39.26	8.00e-24	104.00
IUUC-Dme-031975	Drosophila melanogaster	36.36	5.00e-45	175.00
IUUC-Ete-033177	Echinops telfairi	42.77	1.00e-30	127.00
IUUC-Eca-033670	Equus caballus	42.77	6.00e-31	128.00
IUUC-Eeu-035100	Erinaceus europaeus	40.36	8.00e-25	108.00
IUUC-Fca-036176	Felis catus	42.77	6.00e-31	128.00
IUUC-Fal-036776	Ficedula albicollis	43.87	3.00e-25	109.00
IUUC-Fox-037706	Fusarium oxysporum	36.14	3.00e-22	99.00
IUUC-Fso-038313	Fusarium solani	39.16	1.00e-23	103.00
IUUC-Gmo-038887	Gadus morhua	35.03	1.00e-47	184.00
IUUC-Ggr-039932	Gaeumannomyces graminis	37.65	5.00e-22	98.60
IUUC-Gga-041184	Gallus gallus	44.52	1.00e-26	114.00
IUUC-Gac-042118	Gasterosteus aculeatus	42.17	3.00e-26	113.00
IUUC-Gma-043382	Glycine max	73.51	5.00e-143	501.00
IUUC-Ggo-045641	Gorilla gorilla	42.77	6.00e-31	128.00
IUUC-Hsa-045751	Homo sapiens	42.77	5.00e-31	129.00
IUUC-Hvu-047702	Hordeum vulgare	91.92	0.00e+00	861.00
IUUC-Itr-047960	Ictidomys tridecemlineatus	42.20	5.00e-31	129.00
IUUC-Kpa-049400	Komagataella pastoris	28.73	1.00e-25	110.00
IUUC-Lch-050152	Latimeria chalumnae	44.52	7.00e-26	111.00
IUUC-Lpe-051570	Leersia perrieri	80.38	9.00e-169	586.00
IUUC-Loc-051753	Lepisosteus oculatus	43.98	3.00e-31	129.00
IUUC-Lma-053219	Leptosphaeria maculans	36.23	9.00e-24	103.00
IUUC-Laf-053643	Loxodonta africana	43.83	1.00e-30	127.00
IUUC-Mcc-055091	Macaca mulatta	42.77	6.00e-31	128.00
IUUC-Meu-056036	Macropus eugenii	39.31	1.00e-24	107.00
IUUC-Mor-057214	Magnaporthe oryzae	36.14	5.00e-20	91.70
IUUC-Mpo-057385	Magnaporthe poae	31.82	3.00e-07	48.50
IUUC-Mtr-057954	Medicago truncatula	71.27	3.00e-143	501.00
IUUC-Mla-059020	Melampsora laricipopulina	26.32	1.00e-26	114.00
IUUC-Mga-060176	Meleagris gallopavo	44.52	1.00e-26	114.00
IUUC-Mvi-060278	Microbotryum violaceum	29.17	5.00e-37	148.00
IUUC-Mmr-061602	Microcebus murinus	42.77	8.00e-31	128.00
IUUC-Mdo-062047	Monodelphis domestica	42.77	7.00e-31	128.00
IUUC-Mmu-063377	Mus musculus	43.83	9.00e-31	128.00
IUUC-Mac-065503	Musa acuminata	71.26	3.00e-151	528.00
IUUC-Mpu-066047	Mustela putorius furo	42.77	6.00e-31	128.00
IUUC-Mlu-067039	Myotis lucifugus	42.77	8.00e-31	128.00
IUUC-Nfi-068434	Neosartorya fischeri	43.48	3.00e-26	112.00
IUUC-Ncr-068912	Neurospora crassa	37.95	8.00e-24	104.00
IUUC-Nle-069540	Nomascus leucogenys	42.77	6.00e-31	128.00
IUUC-Opr-071157	Ochotona princeps	43.98	6.00e-31	128.00
IUUC-Ont-072229	Oreochromis niloticus	44.52	2.00e-30	127.00
IUUC-Oan-073616	Ornithorhynchus anatinus	54.00	8.00e-09	52.80
IUUC-Ocu-074002	Oryctolagus cuniculus	42.77	6.00e-31	128.00
IUUC-Oba-075659	Oryza barthii	82.14	1.00e-145	509.00
IUUC-Obr-076465	Oryza brachyantha	83.25	2.00e-173	601.00
IUUC-Ogl-077461	Oryza glaberrima	82.38	4.00e-175	607.00
IUUC-Ogu-078515	Oryza glumaepatula	83.33	1.00e-172	599.00
IUUC-Oin-080201	Oryza indica	78.72	3.00e-170	591.00
IUUC-Olo-080751	Oryza longistaminata	82.14	1.00e-145	509.00
IUUC-Ome-081201	Oryza meridionalis	81.80	3.00e-175	608.00
IUUC-Oni-082951	Oryza nivara	78.72	2.00e-169	588.00
IUUC-Opu-083560	Oryza punctata	83.70	3.00e-170	591.00
IUUC-Oru-084440	Oryza rufipogon	83.57	6.00e-176	610.00
IUUC-Osa-085699	Oryza sativa	82.38	4.00e-175	607.00
IUUC-Ola-086705	Oryzias latipes	44.52	1.00e-30	127.00
IUUC-Olu-087794	Ostreococcus lucimarinus	46.59	2.00e-76	280.00
IUUC-Oga-088896	Otolemur garnettii	42.77	6.00e-31	128.00
IUUC-Oar-090155	Ovis aries	42.77	6.00e-31	128.00
IUUC-Ptr-090754	Pan troglodytes	42.77	5.00e-31	129.00
IUUC-Pan-092464	Papio anubis	42.77	6.00e-31	128.00
IUUC-Psi-093166	Pelodiscus sinensis	42.77	2.00e-26	113.00
IUUC-Pma-094280	Petromyzon marinus	43.79	4.00e-30	125.00
IUUC-Pno-095106	Phaeosphaeria nodorum	34.51	1.00e-18	87.00
IUUC-Ppa-095510	Physcomitrella patens	65.99	6.00e-106	377.00
IUUC-Pfo-096212	Poecilia formosa	43.87	4.00e-26	112.00
IUUC-Pab-098482	Pongo abelii	42.77	6.00e-31	128.00
IUUC-Pop-099479	Populus trichocarpa	72.87	5.00e-142	497.00
IUUC-Pca-100776	Procavia capensis	47.79	6.00e-21	95.50
IUUC-Ppe-101595	Prunus persica	71.12	1.00e-140	493.00
IUUC-Pva-102981	Pteropus vampyrus	45.32	5.00e-27	115.00
IUUC-Pgr-103503	Puccinia graminis	29.65	2.00e-29	124.00
IUUC-Ptt-103994	Puccinia triticina	29.43	1.00e-26	114.00
IUUC-Pte-104226	Pyrenophora teres	37.50	3.00e-23	102.00
IUUC-Pyt-104732	Pyrenophora triticirepentis	37.50	2.00e-23	102.00
IUUC-Rno-105225	Rattus norvegicus	43.21	1.00e-30	128.00
IUUC-Sce-106278	Saccharomyces cerevisiae	23.24	2.00e-07	48.50
IUUC-Sha-107353	Sarcophilus harrisii	43.98	7.00e-31	128.00
IUUC-Sja-107876	Schizosaccharomyces japonicus	28.41	2.00e-29	123.00
IUUC-Spo-108266	Schizosaccharomyces pombe	27.76	7.00e-30	124.00
IUUC-Ssl-108518	Sclerotinia sclerotiorum	40.72	4.00e-26	111.00
IUUC-Smo-108952	Selaginella moellendorffii	61.92	3.00e-100	358.00
IUUC-Sit-110019	Setaria italica	86.81	1.00e-179	622.00
IUUC-Sly-111621	Solanum lycopersicum	72.97	2.00e-130	459.00
IUUC-Stu-112703	Solanum tuberosum	73.74	3.00e-128	451.00
IUUC-Sar-113166	Sorex araneus	48.67	5.00e-21	95.50
IUUC-Sbi-114746	Sorghum bicolor	81.73	0.00e+00	812.00
IUUC-Sre-115196	Sporisorium reilianum	30.79	3.00e-28	119.00
IUUC-Ssc-115573	Sus scrofa	42.77	6.00e-31	128.00
IUUC-Tgu-117284	Taeniopygia guttata	44.52	1.00e-26	114.00
IUUC-Tru-118236	Takifugu rubripes	43.29	3.00e-26	112.00
IUUC-Tsy-119219	Tarsius syrichta	39.31	6.00e-25	108.00
IUUC-Tni-119929	Tetraodon nigroviridis	42.17	2.00e-31	130.00
IUUC-Tca-121156	Theobroma cacao	73.24	2.00e-143	502.00
IUUC-Tre-122179	Trichoderma reesei	38.82	5.00e-21	95.10
IUUC-Tvi-122326	Trichoderma virens	38.55	4.00e-24	105.00
IUUC-Tae-124313	Triticum aestivum	98.55	0.00e+00	1059.00
IUUC-Tur-126352	Triticum urartu	99.35	0.00e+00	1018.00
IUUC-Tme-126996	Tuber melanosporum	31.35	9.00e-37	147.00
IUUC-Tbe-127271	Tupaia belangeri	40.12	1.00e-24	107.00
IUUC-Ttr-128433	Tursiops truncatus	42.77	6.00e-31	128.00
IUUC-Uma-129357	Ustilago maydis	30.73	3.00e-29	122.00
IUUC-Vda-130010	Verticillium dahliae	37.95	3.00e-22	99.00
IUUC-Vvi-131734	Vitis vinifera	72.55	3.00e-141	494.00
IUUC-Xtr-132013	Xenopus tropicalis	41.04	5.00e-31	129.00
IUUC-Xma-134244	Xiphophorus maculatus	43.87	9.00e-26	111.00
IUUC-Yli-134579	Yarrowia lipolytica	30.27	5.00e-24	104.00
IUUC-Zma-135716	Zea mays	81.01	0.00e+00	795.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence