iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074747

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02047011

Gene Name

TRIM55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000005522.3	ENSOCUT00000024067.2	ENSOCUP00000023427.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-09	36.0	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f +++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 26   CPICLEMFTKPVVILPCQHNLCRKCASDIfqasnpylptrGGTTVASGGRFRCPSCR 82
           *************************744445557779999888889**********8 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MSASLNYKSF SKEQQTMDNL EKQLICPICL EMFTKPVVIL PCQHNLCRKC ASDIFQASNP 60
YLPTRGGTTV ASGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESTRPEKKSD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCGAACAT CTTTGTGTTG AAGTCAGCTT TTACGATGGG TTTTTCCCAG ACCACCACCA 60
GGACAAAGGT GAACATTAAG CCAGTCTGAA TATTGCCCTT GTGAAGCTGG GACGACGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	87.70	0.00e+00	792.00
IUUC-Apl-003341	Anas platyrhynchos	70.53	0.00e+00	653.00
IUUC-Aca-005384	Anolis carolinensis	64.38	7.00e-173	600.00
IUUC-Ame-010720	Astyanax mexicanus	72.15	4.00e-140	490.00
IUUC-Bta-013040	Bos taurus	84.21	0.00e+00	756.00
IUUC-Cja-019932	Callithrix jacchus	89.98	0.00e+00	794.00
IUUC-Cfa-020450	Canis familiaris	88.65	0.00e+00	815.00
IUUC-Cpo-021767	Cavia porcellus	86.47	0.00e+00	813.00
IUUC-Csa-023600	Chlorocebus sabaeus	88.11	0.00e+00	822.00
IUUC-Cho-024753	Choloepus hoffmanni	76.27	0.00e+00	696.00
IUUC-Dre-028701	Danio rerio	71.20	3.00e-138	484.00
IUUC-Dno-030008	Dasypus novemcinctus	83.82	0.00e+00	760.00
IUUC-Ete-032274	Echinops telfairi	79.96	0.00e+00	712.00
IUUC-Eca-034326	Equus caballus	88.82	0.00e+00	785.00
IUUC-Fca-035385	Felis catus	88.03	0.00e+00	733.00
IUUC-Fal-036679	Ficedula albicollis	90.76	4.00e-178	617.00
IUUC-Gmo-039021	Gadus morhua	65.19	3.00e-120	424.00
IUUC-Gga-040576	Gallus gallus	90.45	2.00e-175	608.00
IUUC-Gac-042165	Gasterosteus aculeatus	66.56	5.00e-133	467.00
IUUC-Ggo-044496	Gorilla gorilla	89.04	0.00e+00	783.00
IUUC-Hsa-046337	Homo sapiens	89.43	0.00e+00	783.00
IUUC-Lch-050504	Latimeria chalumnae	64.97	7.00e-178	616.00
IUUC-Loc-052717	Lepisosteus oculatus	74.77	3.00e-151	528.00
IUUC-Laf-053838	Loxodonta africana	83.59	0.00e+00	801.00
IUUC-Mcc-054690	Macaca mulatta	87.50	0.00e+00	778.00
IUUC-Meu-056782	Macropus eugenii	65.96	3.00e-176	611.00
IUUC-Mga-060112	Meleagris gallopavo	89.87	1.00e-174	605.00
IUUC-Mmr-061229	Microcebus murinus	86.27	0.00e+00	776.00
IUUC-Mdo-062397	Monodelphis domestica	75.00	0.00e+00	679.00
IUUC-Mmu-063764	Mus musculus	82.32	0.00e+00	754.00
IUUC-Mpu-066503	Mustela putorius furo	88.80	0.00e+00	828.00
IUUC-Mlu-068160	Myotis lucifugus	96.51	4.00e-99	352.00
IUUC-Nle-069170	Nomascus leucogenys	88.24	0.00e+00	793.00
IUUC-Ont-072082	Oreochromis niloticus	68.47	1.00e-132	466.00
IUUC-Oan-072715	Ornithorhynchus anatinus	75.37	0.00e+00	667.00
IUUC-Ola-086646	Oryzias latipes	66.56	3.00e-129	454.00
IUUC-Oga-087995	Otolemur garnettii	86.89	0.00e+00	787.00
IUUC-Oar-089844	Ovis aries	85.96	0.00e+00	764.00
IUUC-Ptr-091556	Pan troglodytes	89.24	0.00e+00	781.00
IUUC-Pan-092224	Papio anubis	87.89	0.00e+00	779.00
IUUC-Psi-093856	Pelodiscus sinensis	72.78	0.00e+00	675.00
IUUC-Pma-094534	Petromyzon marinus	56.35	2.00e-102	365.00
IUUC-Pfo-096596	Poecilia formosa	61.83	2.00e-129	455.00
IUUC-Pca-100510	Procavia capensis	80.16	0.00e+00	739.00
IUUC-Pva-102962	Pteropus vampyrus	87.09	0.00e+00	710.00
IUUC-Ptt-103920	Puccinia triticina	30.12	1.00e-05	43.10
IUUC-Rno-105696	Rattus norvegicus	81.14	0.00e+00	734.00
IUUC-Sha-106825	Sarcophilus harrisii	75.88	0.00e+00	677.00
IUUC-Ssc-116332	Sus scrofa	85.07	0.00e+00	768.00
IUUC-Tgu-117208	Taeniopygia guttata	90.45	5.00e-178	617.00
IUUC-Tru-118744	Takifugu rubripes	65.85	7.00e-132	463.00
IUUC-Tsy-119352	Tarsius syrichta	84.50	0.00e+00	788.00
IUUC-Tni-120413	Tetraodon nigroviridis	68.05	3.00e-130	457.00
IUUC-Tbe-127821	Tupaia belangeri	99.50	3.00e-122	432.00
IUUC-Ttr-128545	Tursiops truncatus	85.49	0.00e+00	750.00
IUUC-Vpa-130699	Vicugna pacos	97.56	0.00e+00	677.00
IUUC-Xtr-132207	Xenopus tropicalis	63.39	3.00e-178	618.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence