iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099588

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_847131; POPTR_0001s32280g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s32280	POPTR_0001s32280.1	POPTR_0001s32280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.70e-81	275.2	233	922

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqq 90
           Gl NlgNtC++NSv+Q L+++++l + + +   e+        + g+l++sl+klf+ l   ++ +++++p++++ +++++a++f+gy+qq
   Q: 233  GLVNLGNTCFFNSVMQNLLAMNKLHDHFSS---EE-------ASFGPLSSSLKKLFTDLKaeTGFRNVINPKSFFGSVCSKAPQFRGYQQQ 313
           9*****************************...33.......34689************98889999************************ PP
   S: 91   DaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkee 181
           D++E+l++lld+l++e               +k++  +e++  ++k+++++++  F+g ++s++ c ec+++s+ +epfldlslpvp k+ 
   Q: 314  DSHELLHCLLDGLSTEELT-----------VRKRRNASEEDGIPPKHGPTFVDSAFGGLISSTVCCVECGHSSTVHEPFLDLSLPVPTKKP 393
           **************99912...........2222233345677999*******************************************98 PP
   S: 182  tkke....................................................................................... 185
             k+                                                                                       
   Q: 394  PTKKvqpvsqakktklppkrggkvqpkinrntdsmpaqsvskpsvqsdspcqtqsavpltentvassdnipapgstapttavdergevsqn 484
           87779************************************************************************************** PP
   S: 186  ........................................................................................... 185
                                                                                                      
   Q: 485  laaviesdskqavettmeqiassfddfwmdyigaettsehdfakennvlaagqqcgdkvnipnddltetcqassidgepnkkpesssvnpw 575
           ******************************************************************************************* PP
   S: 186  ........................................................................................... 185
                                                                                                      
   Q: 576  eeevplqvrssevlllpykeegftdreimkgeseagssfvgcgqdeaefdgigdlfnepevsaapvagpslgnevalpsfiagissesdpd 666
           ******************************************************************************************* PP
   S: 186  .........slqdcLesftkeeelegenkyycekck....................................................... 212
                    sl++cL+ f k+e l ++n+++ce+c                                                        
   Q: 667  evddsdspvSLESCLALFIKPELLSNDNAWECENCSnilreqrldaknkqskispkasingdetqiqsdsvktlsgppvdscsvdetsstg 757
           ******************************************************************************************* PP
   S: 213  .................................kkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspee 270
                                             k++a+k++ ++k P++L++hLkRfs + + ++ +k+n +v+f + Ldl+p++  ++ 
   Q: 758  ytmakdeqtdcnfpgncesdvnedgdktlkklnVKRDATKRVLIDKAPPILTVHLKRFSQDAR-GRLSKLNGHVNFRDVLDLRPYMDPRCV 847
           ******9999999999999999999999999988888*********************77665.8899********************998 PP
   S: 271  kqkekkkYeLiavvvHsGslssGHYvayvkn..........ekgk....WllfdDskVtevkeeevleetgstaYvlfYkr 337
           +  +++ Y+L++vv HsG++++GHY+ayv+           e  +    W++ +D +V+ev+ eevl+   ++aY+lfY++
   Q: 848  DT-QSYVYRLLGVVEHSGTMRGGHYIAYVRGdargkgradkE--QggsvWYYASDAHVQEVSLEEVLR---CDAYLLFYEK 922
           76.5***************************88877776542..25689*******************...********97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGKRANKKKT RPLQKEKRVA GHSPKSVPQQ TNLNVEDVDG VTVVKERKLC PHFDKGFDAN 60
KLSEKISSSD SFRCEDCREA VGDRKGAKGK GKQVKKKGSG SVDSKSESKA IWVCLECGHL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCAATGTT TTTATTTTAA TGGATTGCTT TTAGGGACCA ATGGGGAAAA GGGCTAATAA 60
GAAAAAGACT CGGCCACTGC AGAAAGAGAA GCGGGTTGCT GGCCATTCTC CCAAGAGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s32280g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000997	Aegilops tauschii	32.72	5.00e-75	275.00
IUUC-Bdi-014624	Brachypodium distachyon	32.37	4.00e-67	249.00
IUUC-Cin-025775	Ciona intestinalis	39.58	6.00e-21	92.40
IUUC-Csv-026075	Ciona savignyi	41.78	4.00e-23	102.00
IUUC-Dor-030443	Dipodomys ordii	41.45	3.00e-27	116.00
IUUC-Eeu-034835	Erinaceus europaeus	41.33	2.00e-27	117.00
IUUC-Hvu-047146	Hordeum vulgare	30.66	2.00e-66	246.00
IUUC-Lch-050536	Latimeria chalumnae	30.02	2.00e-37	150.00
IUUC-Lpe-050703	Leersia perrieri	32.02	9.00e-71	261.00
IUUC-Mcc-055491	Macaca mulatta	32.52	8.00e-37	148.00
IUUC-Mtr-057945	Medicago truncatula	43.25	5.00e-114	405.00
IUUC-Mla-059026	Melampsora laricipopulina	37.59	5.00e-19	89.00
IUUC-Oan-073656	Ornithorhynchus anatinus	31.16	4.00e-35	142.00
IUUC-Oba-075094	Oryza barthii	33.23	1.00e-71	265.00
IUUC-Obr-076743	Oryza brachyantha	33.82	1.00e-70	261.00
IUUC-Ogl-077739	Oryza glaberrima	33.23	1.00e-71	264.00
IUUC-Ogu-078851	Oryza glumaepatula	33.38	5.00e-72	265.00
IUUC-Oin-079402	Oryza indica	33.23	6.00e-72	265.00
IUUC-Olo-080431	Oryza longistaminata	33.38	4.00e-72	266.00
IUUC-Ome-081580	Oryza meridionalis	33.23	4.00e-72	266.00
IUUC-Oni-082644	Oryza nivara	33.23	6.00e-72	265.00
IUUC-Opu-083452	Oryza punctata	32.14	8.00e-74	271.00
IUUC-Oru-084546	Oryza rufipogon	33.23	7.00e-72	265.00
IUUC-Osa-085858	Oryza sativa	33.23	1.00e-71	264.00
IUUC-Ola-086795	Oryzias latipes	26.93	1.00e-35	144.00
IUUC-Pan-092023	Papio anubis	32.52	1.00e-36	147.00
IUUC-Pab-098539	Pongo abelii	32.82	2.00e-36	147.00
IUUC-Pca-101069	Procavia capensis	41.18	5.00e-28	119.00
IUUC-Pva-103092	Pteropus vampyrus	41.18	1.00e-27	117.00
IUUC-Smo-108942	Selaginella moellendorffii	52.33	2.00e-42	165.00
IUUC-Sit-110283	Setaria italica	33.52	2.00e-75	277.00
IUUC-Sly-111487	Solanum lycopersicum	45.23	0.00e+00	734.00
IUUC-Sbi-113785	Sorghum bicolor	32.67	8.00e-70	258.00
IUUC-Tru-118640	Takifugu rubripes	29.46	1.00e-37	151.00
IUUC-Tsy-118869	Tarsius syrichta	30.11	2.00e-31	130.00
IUUC-Tni-120015	Tetraodon nigroviridis	28.21	4.00e-37	149.00
IUUC-Tca-121701	Theobroma cacao	57.24	0.00e+00	758.00
IUUC-Tae-125305	Triticum aestivum	31.72	2.00e-68	253.00
IUUC-Tur-126788	Triticum urartu	31.46	2.00e-65	243.00
IUUC-Tbe-128041	Tupaia belangeri	36.11	2.00e-28	120.00
IUUC-Vvi-131230	Vitis vinifera	74.58	4.00e-24	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence