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Tag Content
iUUCD ID IUUC-Kpa-049205
Ensembl Protein ID CAY70704
UniProt Accession C4R568; C4R568_KOMPG
Genbank Protein ID CAY70704.1
Protein Name ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for
Genbank Nucleotide ID FN392321
Gene Name PAS_chr3_0657
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PAS_chr3_0657 CAY70704 CAY70704
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/Other 56.59 0.00e+00 958.00 IUUC-Sce-106206
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Komagataella pastoris
Protein Sequence
(Fasta)
MNHDSPLTSV VNQSIDVSSE SSLSKQDLDK LINQNSENFV SHEQEILSLT ALPEHACKYC 60
GVSNPRCVVR CDICKKWFCN GKSGTTSHII SHMVLSRHHE VSLHSDSDLG ETELECYSCG 120
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Protein Fasta Sequence


>IUUC-Kpa-049205|E3,E3 activity/Other|Komagataella pastoris
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAATCACG ATAGTCCGCT AACGTCTGTG GTTAATCAAT CCATCGACGT ATCATCTGAA 60
TCATCATTGT CAAAACAAGA TCTGGACAAA TTGATCAATC AGAACTCGGA AAACTTTGTA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Kpa-049205|E3,E3 activity/Other|Komagataella pastoris
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0347--Helicase
KW-0378--Hydrolase
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
Interpro

IPR003593--AAA+_ATPase
IPR014001--Helicase_ATP-bd
IPR027417--P-loop_NTPase
IPR018999--RNA-helicase_UPF1_UPF2-interct
Pfam

PF09416--UPF1_Zn_bind
SMART

SM00382--AAA
SM00487--DEXDc
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0004386--F:helicase activity
GO:0008270--F:zinc ion binding
GO:0000184--P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
KEGG ppa:PAS_chr3_0657
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000680 Aegilops tauschii 45.24 0.00e+00 690.00
IUUC-Aml-002008 Ailuropoda melanoleuca 49.82 0.00e+00 798.00
IUUC-Atr-002632 Amborella trichopoda 51.01 0.00e+00 764.00
IUUC-Apl-003997 Anas platyrhynchos 49.82 0.00e+00 798.00
IUUC-Aca-004322 Anolis carolinensis 32.48 2.00e-55 208.00
IUUC-Aly-006521 Arabidopsis lyrata 50.25 0.00e+00 762.00
IUUC-Ath-007059 Arabidopsis thaliana 50.12 0.00e+00 758.00
IUUC-Ago-007801 Ashbya gossypii 55.63 0.00e+00 981.00
IUUC-Acl-008312 Aspergillus clavatus 53.27 0.00e+00 827.00
IUUC-Afl-008429 Aspergillus flavus 52.70 0.00e+00 828.00
IUUC-Afu-009092 Aspergillus fumigatus 53.52 0.00e+00 829.00
IUUC-Ani-009317 Aspergillus nidulans 52.35 0.00e+00 825.00
IUUC-Ang-009783 Aspergillus niger 52.42 0.00e+00 833.00
IUUC-Aor-010178 Aspergillus oryzae 52.70 0.00e+00 828.00
IUUC-Ate-010294 Aspergillus terreus 53.39 0.00e+00 828.00
IUUC-Ame-010774 Astyanax mexicanus 57.35 4.00e-91 327.00
IUUC-Bgr-012293 Blumeria graminis 49.77 0.00e+00 823.00
IUUC-Bta-012382 Bos taurus 49.82 0.00e+00 798.00
IUUC-Bci-013937 Botrytis cinerea 51.80 0.00e+00 833.00
IUUC-Bdi-014612 Brachypodium distachyon 48.12 0.00e+00 755.00
IUUC-Bol-015145 Brassica oleracea 49.88 0.00e+00 753.00
IUUC-Bra-017370 Brassica rapa 50.26 0.00e+00 723.00
IUUC-Cel-018240 Caenorhabditis elegans 46.76 0.00e+00 723.00
IUUC-Cja-019892 Callithrix jacchus 49.34 0.00e+00 799.00
IUUC-Cfa-020700 Canis familiaris 49.82 0.00e+00 798.00
IUUC-Cpo-021510 Cavia porcellus 48.75 0.00e+00 796.00
IUUC-Cre-022731 Chlamydomonas reinhardtii 47.57 0.00e+00 687.00
IUUC-Csa-023665 Chlorocebus sabaeus 49.34 0.00e+00 800.00
IUUC-Cin-025798 Ciona intestinalis 49.14 0.00e+00 733.00
IUUC-Csv-025901 Ciona savignyi 48.89 0.00e+00 738.00
IUUC-Cgl-026653 Colletotrichum gloeosporioides 52.01 0.00e+00 822.00
IUUC-Cne-027014 Cryptococcus neoformans 49.26 0.00e+00 790.00
IUUC-Dre-028705 Danio rerio 49.82 0.00e+00 807.00
IUUC-Dor-030369 Dipodomys ordii 46.68 0.00e+00 757.00
IUUC-Dme-031767 Drosophila melanogaster 49.56 0.00e+00 759.00
IUUC-Ete-032800 Echinops telfairi 34.55 7.00e-59 220.00
IUUC-Eca-033840 Equus caballus 50.31 0.00e+00 799.00
IUUC-Eeu-034678 Erinaceus europaeus 34.78 6.50e-02 31.20
IUUC-Fca-035466 Felis catus 49.76 0.00e+00 797.00
IUUC-Fal-037548 Ficedula albicollis 50.06 0.00e+00 791.00
IUUC-Fox-038023 Fusarium oxysporum 50.47 0.00e+00 833.00
IUUC-Gmo-039285 Gadus morhua 50.00 0.00e+00 796.00
IUUC-Ggr-039810 Gaeumannomyces graminis 51.08 0.00e+00 830.00
IUUC-Gga-040972 Gallus gallus 50.31 0.00e+00 800.00
IUUC-Gac-042075 Gasterosteus aculeatus 49.94 0.00e+00 800.00
IUUC-Gma-042713 Glycine max 51.01 0.00e+00 784.00
IUUC-Ggo-045398 Gorilla gorilla 50.31 0.00e+00 799.00
IUUC-Hsa-046152 Homo sapiens 49.34 0.00e+00 800.00
IUUC-Hvu-047555 Hordeum vulgare 45.55 7.00e-103 365.00
IUUC-Itr-048247 Ictidomys tridecemlineatus 50.13 0.00e+00 785.00
IUUC-Lch-049587 Latimeria chalumnae 55.08 2.00e-156 543.00
IUUC-Lpe-051059 Leersia perrieri 50.38 0.00e+00 755.00
IUUC-Loc-051911 Lepisosteus oculatus 49.70 0.00e+00 802.00
IUUC-Lma-053007 Leptosphaeria maculans 49.54 0.00e+00 822.00
IUUC-Laf-054234 Loxodonta africana 49.82 0.00e+00 798.00
IUUC-Mcc-054762 Macaca mulatta 48.87 0.00e+00 799.00
IUUC-Meu-056677 Macropus eugenii 58.00 3.00e-99 354.00
IUUC-Mor-057147 Magnaporthe oryzae 50.42 0.00e+00 832.00
IUUC-Mpo-057314 Magnaporthe poae 50.53 0.00e+00 830.00
IUUC-Mtr-058329 Medicago truncatula 51.01 0.00e+00 783.00
IUUC-Mla-059094 Melampsora laricipopulina 44.21 4.00e-112 396.00
IUUC-Mga-060126 Meleagris gallopavo 49.39 0.00e+00 784.00
IUUC-Mvi-060373 Microbotryum violaceum 49.59 0.00e+00 820.00
IUUC-Mmr-060628 Microcebus murinus 48.87 0.00e+00 798.00
IUUC-Mdo-061858 Monodelphis domestica 50.31 0.00e+00 798.00
IUUC-Mmu-064116 Mus musculus 49.46 0.00e+00 802.00
IUUC-Mac-065136 Musa acuminata 50.88 0.00e+00 760.00
IUUC-Mpu-066463 Mustela putorius furo 50.31 0.00e+00 801.00
IUUC-Mlu-068098 Myotis lucifugus 50.31 0.00e+00 801.00
IUUC-Nfi-068370 Neosartorya fischeri 53.52 0.00e+00 829.00
IUUC-Ncr-068792 Neurospora crassa 52.01 0.00e+00 818.00
IUUC-Nle-070102 Nomascus leucogenys 49.28 0.00e+00 799.00
IUUC-Opr-070620 Ochotona princeps 46.68 0.00e+00 738.00
IUUC-Ont-072685 Oreochromis niloticus 50.93 0.00e+00 813.00
IUUC-Oan-073665 Ornithorhynchus anatinus 49.69 0.00e+00 796.00
IUUC-Ocu-074154 Oryctolagus cuniculus 35.24 2.00e-60 225.00
IUUC-Oba-075075 Oryza barthii 47.54 2.00e-168 583.00
IUUC-Obr-076183 Oryza brachyantha 49.64 4.00e-180 622.00
IUUC-Ogl-077691 Oryza glaberrima 50.38 0.00e+00 756.00
IUUC-Ogu-078423 Oryza glumaepatula 50.38 0.00e+00 755.00
IUUC-Oin-080107 Oryza indica 50.38 0.00e+00 755.00
IUUC-Olo-080269 Oryza longistaminata 48.67 0.00e+00 695.00
IUUC-Ome-081779 Oryza meridionalis 48.98 0.00e+00 755.00
IUUC-Oni-082366 Oryza nivara 50.38 0.00e+00 755.00
IUUC-Opu-083958 Oryza punctata 50.38 0.00e+00 756.00
IUUC-Oru-084182 Oryza rufipogon 48.98 0.00e+00 755.00
IUUC-Osa-085285 Oryza sativa 48.98 0.00e+00 754.00
IUUC-Ola-086954 Oryzias latipes 49.23 0.00e+00 787.00
IUUC-Olu-087685 Ostreococcus lucimarinus 47.43 0.00e+00 713.00
IUUC-Oga-088591 Otolemur garnettii 49.34 0.00e+00 801.00
IUUC-Oar-089417 Ovis aries 49.69 0.00e+00 796.00
IUUC-Ptr-091510 Pan troglodytes 48.62 0.00e+00 783.00
IUUC-Pan-091886 Papio anubis 49.34 0.00e+00 800.00
IUUC-Psi-093755 Pelodiscus sinensis 53.78 8.00e-167 578.00
IUUC-Pma-094470 Petromyzon marinus 50.25 0.00e+00 796.00
IUUC-Pno-094963 Phaeosphaeria nodorum 51.98 0.00e+00 822.00
IUUC-Ppa-095479 Physcomitrella patens 51.25 0.00e+00 788.00
IUUC-Pfo-097456 Poecilia formosa 50.93 0.00e+00 807.00
IUUC-Pab-098075 Pongo abelii 46.03 0.00e+00 710.00
IUUC-Pop-099557 Populus trichocarpa 50.38 0.00e+00 776.00
IUUC-Pca-100717 Procavia capensis 60.63 5.00e-103 367.00
IUUC-Ppe-101675 Prunus persica 51.01 0.00e+00 785.00
IUUC-Pva-103029 Pteropus vampyrus 49.12 2.00e-169 587.00
IUUC-Pgr-103318 Puccinia graminis 49.57 0.00e+00 797.00
IUUC-Ptt-103956 Puccinia triticina 49.82 0.00e+00 800.00
IUUC-Pte-104399 Pyrenophora teres 49.42 0.00e+00 821.00
IUUC-Pyt-104749 Pyrenophora triticirepentis 51.85 0.00e+00 822.00
IUUC-Rno-105784 Rattus norvegicus 49.46 0.00e+00 803.00
IUUC-Sce-106206 Saccharomyces cerevisiae 55.78 0.00e+00 950.00
IUUC-Sha-106566 Sarcophilus harrisii 49.69 0.00e+00 792.00
IUUC-Sja-107721 Schizosaccharomyces japonicus 50.92 0.00e+00 792.00
IUUC-Spo-108258 Schizosaccharomyces pombe 50.00 0.00e+00 776.00
IUUC-Ssl-108640 Sclerotinia sclerotiorum 48.50 0.00e+00 708.00
IUUC-Sit-109760 Setaria italica 50.63 0.00e+00 758.00
IUUC-Sly-111807 Solanum lycopersicum 51.01 0.00e+00 788.00
IUUC-Stu-112869 Solanum tuberosum 49.10 0.00e+00 777.00
IUUC-Sar-112950 Sorex araneus 35.18 1.00e-48 186.00
IUUC-Sbi-114863 Sorghum bicolor 50.75 0.00e+00 763.00
IUUC-Sre-115092 Sporisorium reilianum 49.76 0.00e+00 815.00
IUUC-Ssc-116215 Sus scrofa 29.69 2.40e-02 31.60
IUUC-Tgu-117214 Taeniopygia guttata 45.17 0.00e+00 682.00
IUUC-Tru-118386 Takifugu rubripes 49.51 0.00e+00 780.00
IUUC-Tsy-119550 Tarsius syrichta 46.62 2.00e-59 221.00
IUUC-Tni-120212 Tetraodon nigroviridis 50.00 0.00e+00 782.00
IUUC-Tca-121353 Theobroma cacao 51.26 0.00e+00 787.00
IUUC-Tre-122245 Trichoderma reesei 35.32 3.00e-56 212.00
IUUC-Tvi-122452 Trichoderma virens 48.52 0.00e+00 822.00
IUUC-Tae-123692 Triticum aestivum 46.78 0.00e+00 762.00
IUUC-Tur-126770 Triticum urartu 44.98 3.00e-121 427.00
IUUC-Tme-126956 Tuber melanosporum 53.57 0.00e+00 843.00
IUUC-Tbe-127873 Tupaia belangeri 34.51 2.00e-55 208.00
IUUC-Ttr-128212 Tursiops truncatus 47.21 0.00e+00 705.00
IUUC-Uma-129327 Ustilago maydis 49.88 0.00e+00 815.00
IUUC-Vda-129858 Verticillium dahliae 52.27 0.00e+00 816.00
IUUC-Vpa-130743 Vicugna pacos 35.06 4.00e-55 207.00
IUUC-Vvi-131222 Vitis vinifera 51.01 0.00e+00 763.00
IUUC-Xtr-131800 Xenopus tropicalis 48.15 8.00e-179 619.00
IUUC-Xma-133216 Xiphophorus maculatus 50.93 0.00e+00 807.00
IUUC-Yli-134482 Yarrowia lipolytica 45.88 0.00e+00 766.00
IUUC-Zma-134802 Zea mays 49.34 0.00e+00 763.00
Created Date 25-Jun-2017

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