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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007530
Ensembl Protein ID AT4G36860.1
UniProt Accession Q8W4F0; O23197; DAR1_ARATH
Genbank Protein ID CAB16816.1; CAB80352.1; AEE86710.1; AAL32677.1; AAM47978.1
Protein Name Protein DA1-related 1
Genbank Nucleotide ID Z99708; AL161590; CP002687; AY062599; AY114659
Gene Name DAR1; At4g36860; AP22.33; C7A10.500
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G36860 AT4G36860.2 AT4G36860.2
AT4G36860 AT4G36860.3 AT4G36860.3
AT4G36860 AT4G36860.1 AT4G36860.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINTMentha
Post-translational Modifications (PTMs)
dbPTMUniProt
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
UBD/Alpha-Helix/UIM UIM 11406394
Classification
Family E-value Score Start End
UBD/Alpha-Helix/DUIM 0.00029 21.4 43 59
UBD/Alpha-Helix/UIM 4.8e-05 13.5 149 163
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/DUIM
   S: 2    EdeeLqlAlalSlqEee 18
           + ee+++A+alSl+E+e
   Q: 43   DKEEIECAIALSLSEQE 59
           679************98 PP
   

   UBD/Alpha-Helix/UIM
   S: 1    dEdeeLqlAlalSlq 15
           +Ede+L++Al++S++
   Q: 149  EEDELLAKALQESMN 163
           7************98 PP
   
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Ubiquitin receptor that probably regulates developmental process.
 Ubiquitin receptor that probably regulates developmental process.
Protein Sequence
(Fasta)
MGWLTKILKG SSHKFSDGQC NGRYREDRNL EGPRYSAEGS DFDKEEIECA IALSLSEQEH 60
VIPQDDKGKK IIEYKSETEE DDDDDEDEDE EYMRAQLEAA EEEERRVAQA QIEEEEKRRA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007530|UBD,UIM;UBD,DUIM|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTATAAACCT TCTTAATAAT TTCTTCCGTA AAATAATATG ATTAGTTTTT TTTTTTGTAA 60
ACAAGTGCCC ACTTGCTTGA CCTTCCCAAC CAAAAAAAAC GTAACAATTT CCATCATCTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007530|UBD,UIM;UBD,DUIM|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0440--LIM domain
KW-0479--Metal-binding
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0862--Zinc
Interpro

IPR022087--DA1-like
IPR003903--UIM_dom
IPR001781--Znf_LIM
PROSITE

PS00478--LIM_DOMAIN_1
PS50023--LIM_DOMAIN_2
PS50330--UIM
PS00142--ZINC_PROTEASE
Pfam

PF12315--DA1-like
PF00412--LIM
SMART

SM00132--LIM
SM00726--UIM
Gene Ontology

GO:0005886--C:plasma membrane
GO:0043130--F:ubiquitin binding
GO:0008270--F:zinc ion binding
KEGG ath:AT4G36860
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000888 Aegilops tauschii 68.49 1.00e-174 605.00
IUUC-Aml-001609 Ailuropoda melanoleuca 26.67 3.00e-02 31.60
IUUC-Atr-002465 Amborella trichopoda 71.17 1.00e-179 622.00
IUUC-Aly-005589 Arabidopsis lyrata 96.06 0.00e+00 986.00
IUUC-Ame-011762 Astyanax mexicanus 27.81 7.00e-07 49.30
IUUC-Bgr-012037 Blumeria graminis 37.50 3.20e-01 28.50
IUUC-Bta-012469 Bos taurus 29.79 8.30e-02 30.00
IUUC-Bdi-014789 Brachypodium distachyon 70.38 9.00e-179 619.00
IUUC-Bol-015361 Brassica oleracea 92.11 0.00e+00 780.00
IUUC-Cel-018413 Caenorhabditis elegans 34.04 6.00e-03 34.30
IUUC-Cfa-020384 Canis familiaris 26.67 1.40e-02 32.70
IUUC-Cpo-021667 Cavia porcellus 37.66 1.00e-06 48.10
IUUC-Cho-024905 Choloepus hoffmanni 32.47 1.70e-01 31.20
IUUC-Cin-025236 Ciona intestinalis 30.51 3.00e-05 41.20
IUUC-Csv-026002 Ciona savignyi 28.81 2.00e-04 38.90
IUUC-Dre-027455 Danio rerio 27.15 5.00e-07 49.30
IUUC-Dor-031101 Dipodomys ordii 32.50 5.50e-01 27.30
IUUC-Dse-031181 Dothistroma septosporum 30.56 7.00e-05 42.40
IUUC-Dme-031605 Drosophila melanogaster 26.81 4.00e-06 47.00
IUUC-Eca-033966 Equus caballus 32.50 3.90e-01 27.70
IUUC-Fca-035699 Felis catus 26.67 2.70e-02 31.60
IUUC-Fal-037626 Ficedula albicollis 37.66 8.00e-07 48.50
IUUC-Gga-040724 Gallus gallus 27.81 1.00e-06 48.10
IUUC-Gma-043003 Glycine max 67.31 0.00e+00 736.00
IUUC-Hvu-047551 Hordeum vulgare 66.74 9.00e-159 552.00
IUUC-Lch-050225 Latimeria chalumnae 31.34 7.60e-02 32.00
IUUC-Loc-052468 Lepisosteus oculatus 28.29 4.00e-07 49.70
IUUC-Laf-053578 Loxodonta africana 26.67 1.90e-02 32.30
IUUC-Mpo-057455 Magnaporthe poae 24.11 7.00e-03 34.70
IUUC-Mtr-058103 Medicago truncatula 66.61 0.00e+00 705.00
IUUC-Mla-059141 Melampsora laricipopulina 33.93 4.00e-06 45.80
IUUC-Mmr-060595 Microcebus murinus 32.35 6.00e-07 48.90
IUUC-Mac-065516 Musa acuminata 55.05 3.00e-29 120.00
IUUC-Mpu-066114 Mustela putorius furo 26.39 8.00e-03 33.50
IUUC-Ncr-068674 Neurospora crassa 30.99 5.00e-04 39.70
IUUC-Oba-075285 Oryza barthii 74.83 0.00e+00 629.00
IUUC-Obr-076433 Oryza brachyantha 74.42 0.00e+00 633.00
IUUC-Ogl-077044 Oryza glaberrima 74.83 0.00e+00 629.00
IUUC-Ogu-078868 Oryza glumaepatula 74.83 0.00e+00 629.00
IUUC-Oin-079737 Oryza indica 74.83 0.00e+00 634.00
IUUC-Olo-080337 Oryza longistaminata 74.83 0.00e+00 634.00
IUUC-Oni-082197 Oryza nivara 74.83 0.00e+00 629.00
IUUC-Oru-085246 Oryza rufipogon 74.83 0.00e+00 629.00
IUUC-Osa-086082 Oryza sativa 74.83 0.00e+00 629.00
IUUC-Ola-087406 Oryzias latipes 34.15 5.00e-07 49.30
IUUC-Olu-087728 Ostreococcus lucimarinus 33.15 6.00e-54 204.00
IUUC-Oar-089771 Ovis aries 26.67 3.40e-02 31.20
IUUC-Pma-094377 Petromyzon marinus 31.11 2.70e-01 28.50
IUUC-Ppa-096027 Physcomitrella patens 54.23 3.00e-131 461.00
IUUC-Pfo-097294 Poecilia formosa 35.06 1.00e-06 47.80
IUUC-Pab-098372 Pongo abelii 27.08 6.00e-06 45.80
IUUC-Pop-098996 Populus trichocarpa 65.71 0.00e+00 674.00
IUUC-Pca-100691 Procavia capensis 26.67 3.20e-02 31.60
IUUC-Pte-104256 Pyrenophora teres 30.26 2.00e-03 37.40
IUUC-Sce-106317 Saccharomyces cerevisiae 59.09 2.50e-01 29.30
IUUC-Sha-107134 Sarcophilus harrisii 31.91 1.40e-01 29.30
IUUC-Smo-108841 Selaginella moellendorffii 64.31 5.00e-136 476.00
IUUC-Sit-110147 Setaria italica 69.23 2.00e-179 621.00
IUUC-Sly-111106 Solanum lycopersicum 73.59 0.00e+00 632.00
IUUC-Stu-112570 Solanum tuberosum 73.65 2.00e-179 621.00
IUUC-Sbi-114752 Sorghum bicolor 72.05 0.00e+00 625.00
IUUC-Sre-115199 Sporisorium reilianum 42.59 9.00e-09 55.50
IUUC-Ssc-116398 Sus scrofa 27.08 8.00e-06 45.40
IUUC-Tgu-116824 Taeniopygia guttata 34.07 4.00e-07 48.90
IUUC-Tca-121863 Theobroma cacao 70.87 0.00e+00 720.00
IUUC-Tae-125101 Triticum aestivum 68.71 5.00e-177 613.00
IUUC-Tur-126006 Triticum urartu 65.27 9.00e-173 599.00
IUUC-Tbe-127395 Tupaia belangeri 37.66 2.00e-06 46.20
IUUC-Uma-129653 Ustilago maydis 44.44 4.00e-09 56.60
IUUC-Vpa-130784 Vicugna pacos 36.36 1.00e-05 44.30
IUUC-Vvi-131569 Vitis vinifera 63.21 0.00e+00 669.00
IUUC-Xma-134125 Xiphophorus maculatus 35.06 1.00e-06 48.10
IUUC-Zma-135630 Zea mays 69.55 8.00e-180 622.00
Created Date 25-Jun-2017

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