iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028059

Ensembl Protein ID

ENSDARP00000125624.1

UniProt Accession

E7F055; E7F055_DANRE

Genbank Protein ID

ENSDARP00000099922

Protein Name

Trinucleotide repeat-containing 6C1

Genbank Nucleotide ID

BX470190

Gene Name

tnrc6c1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000076847.4	ENSDART00000151634.2	ENSDARP00000125624.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	39.66	5.00e-27	121.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MEEKKKKKQE EKKKKEAAQK KAAEQKTKVP DSAKPSPTPP LPNNPSIATN PPVPSASSST 60
GGNGKRAPSG NNQQQQQPPA APRYPPREVP PRFRQHEHKQ LLKRGQPLPI GSTALVQPAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTGCCGAG ACTTGAGCCG CTGTTGTCAG TTTCAACAAA ATGGCTGCTG GAGCGCCACA 60
AACGAAATCC CAGTGAACGC TTCACGTCAG TGCAGAATCG TTTCAAATGG ATGCATTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50102--RRM
PS50030--UBA

Pfam

PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	43.65	1.00e-117	418.00
IUUC-Apl-003191	Anas platyrhynchos	57.50	0.00e+00	1063.00
IUUC-Aca-004717	Anolis carolinensis	54.17	0.00e+00	1070.00
IUUC-Ame-010681	Astyanax mexicanus	54.20	0.00e+00	1071.00
IUUC-Bta-012915	Bos taurus	46.77	6.00e-88	320.00
IUUC-Cja-019614	Callithrix jacchus	58.79	0.00e+00	985.00
IUUC-Cfa-020452	Canis familiaris	46.77	1.00e-90	329.00
IUUC-Cpo-021452	Cavia porcellus	59.18	0.00e+00	1052.00
IUUC-Csa-023169	Chlorocebus sabaeus	47.64	6.00e-91	330.00
IUUC-Cho-024655	Choloepus hoffmanni	35.98	3.00e-69	258.00
IUUC-Dno-029734	Dasypus novemcinctus	39.67	2.00e-149	525.00
IUUC-Dor-030671	Dipodomys ordii	43.97	9.00e-116	412.00
IUUC-Dme-032014	Drosophila melanogaster	38.27	5.00e-28	120.00
IUUC-Ete-032774	Echinops telfairi	57.60	0.00e+00	888.00
IUUC-Eca-033866	Equus caballus	59.58	0.00e+00	991.00
IUUC-Eeu-034572	Erinaceus europaeus	62.87	6.00e-41	164.00
IUUC-Fal-036856	Ficedula albicollis	57.62	0.00e+00	1019.00
IUUC-Gga-040531	Gallus gallus	61.21	0.00e+00	1087.00
IUUC-Gac-041681	Gasterosteus aculeatus	61.01	0.00e+00	1180.00
IUUC-Ggo-045143	Gorilla gorilla	60.33	0.00e+00	1033.00
IUUC-Hsa-045913	Homo sapiens	60.61	0.00e+00	1023.00
IUUC-Lch-049619	Latimeria chalumnae	40.07	1.00e-158	555.00
IUUC-Loc-052289	Lepisosteus oculatus	76.79	0.00e+00	1152.00
IUUC-Laf-053607	Loxodonta africana	55.77	0.00e+00	1014.00
IUUC-Mcc-055342	Macaca mulatta	59.05	0.00e+00	983.00
IUUC-Meu-056275	Macropus eugenii	48.87	5.00e-96	347.00
IUUC-Mga-059241	Meleagris gallopavo	50.83	4.00e-96	347.00
IUUC-Mmr-061348	Microcebus murinus	46.95	4.00e-91	330.00
IUUC-Mdo-062155	Monodelphis domestica	60.07	0.00e+00	1080.00
IUUC-Mmu-064259	Mus musculus	48.20	9.00e-96	345.00
IUUC-Mpu-066534	Mustela putorius furo	51.11	2.00e-78	288.00
IUUC-Mlu-067834	Myotis lucifugus	38.97	3.00e-150	527.00
IUUC-Nle-069168	Nomascus leucogenys	46.12	1.00e-86	315.00
IUUC-Opr-070976	Ochotona princeps	35.63	1.00e-72	269.00
IUUC-Ocu-074534	Oryctolagus cuniculus	61.68	2.00e-140	494.00
IUUC-Oga-088116	Otolemur garnettii	46.95	7.00e-91	330.00
IUUC-Oar-090041	Ovis aries	46.77	4.00e-88	320.00
IUUC-Ptr-091135	Pan troglodytes	58.43	0.00e+00	993.00
IUUC-Pan-092665	Papio anubis	57.42	0.00e+00	967.00
IUUC-Psi-093057	Pelodiscus sinensis	38.00	7.00e-07	50.80
IUUC-Pma-094508	Petromyzon marinus	49.80	1.00e-49	191.00
IUUC-Pfo-097115	Poecilia formosa	61.66	0.00e+00	762.00
IUUC-Pab-097935	Pongo abelii	47.64	3.00e-91	331.00
IUUC-Pca-100481	Procavia capensis	68.86	2.00e-140	494.00
IUUC-Pva-102376	Pteropus vampyrus	44.18	1.00e-61	232.00
IUUC-Rno-105508	Rattus norvegicus	47.82	1.00e-91	332.00
IUUC-Sar-113036	Sorex araneus	61.68	3.00e-42	168.00
IUUC-Ssc-115574	Sus scrofa	52.10	0.00e+00	749.00
IUUC-Tgu-117233	Taeniopygia guttata	69.41	0.00e+00	906.00
IUUC-Tru-117725	Takifugu rubripes	62.80	0.00e+00	1296.00
IUUC-Tsy-118786	Tarsius syrichta	50.00	2.00e-55	212.00
IUUC-Tbe-127989	Tupaia belangeri	55.19	6.00e-111	395.00
IUUC-Ttr-128518	Tursiops truncatus	60.45	0.00e+00	1060.00
IUUC-Vpa-130230	Vicugna pacos	45.13	3.00e-73	271.00
IUUC-Xtr-132265	Xenopus tropicalis	53.67	0.00e+00	1047.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence