iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-020597

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03004287

Gene Name

USP42

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000015684.3	ENSCAFT00000024838.3	ENSCAFP00000023043.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.70e-81	274.3	112	411

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC+ N++LQcL+ +p+l++++l+ ++++++++     +  ++++++q  +++ +++   +++p  +++ ++++a++f+  +q
   Q: 112  GLQNLGNTCFANAALQCLTYTPPLANYMLShEHSKTCHA-----EGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQ 195
           9*****************************445555544.....578****************************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+ +++ + +++ ++l+ ++F+g l+s++kcl+c+ vs +++p ld++l+++ 
   Q: 196  EDAHEFLQYTVDAMQKAC------------------LNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA 266
           ******************..................3344567789999**************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
            +     s++++Le+f+k+e+l+gen y+c+kckk + a+k++++++ ++vL+l LkRf    ++    ki k v++p+ Ld++p++++
   Q: 267  AQ-----SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRF----ANFTGGKIAKDVKYPEYLDIRPYMSQ 346
           **.....9***************************************************....668889******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           p+ +   + +Y L+av+vH+G +++ GHY++y+k ++g W++++Ds V++++  +vl+   ++aYvlfY r
   Q: 347  PNGE---PIIYVLYAVLVHTGfNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLS---QQAYVLFYIR 411
           9977...8**************************************************...********87 PP

Organism

Canis familiaris

Protein Sequence
(Fasta)

MTIVDKASES SDPSTYQNQP GSSEAVSPGD MDAGSASWGA VSSLNDVSNH TLSLGPVPGA 60
VVYSSSSVPD KSKPSPQKDQ ALGDGIAPPQ KVLFPSEKIC LKWQQTHRVG AGLQNLGNTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTGAACAA TGACCATAGT TGACAAAGCT TCTGAATCTT CAGACCCATC AACCTATCAG 60
AATCAGCCTG GCAGCTCTGA GGCAGTCTCA CCTGGAGACA TGGATGCAGG TTCTGCCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

cfa:479754

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	38.91	1.00e-70	261.00
IUUC-Aml-002303	Ailuropoda melanoleuca	89.23	0.00e+00	1833.00
IUUC-Atr-003102	Amborella trichopoda	46.91	5.00e-85	309.00
IUUC-Apl-003459	Anas platyrhynchos	45.61	0.00e+00	807.00
IUUC-Aca-004440	Anolis carolinensis	54.68	0.00e+00	1057.00
IUUC-Ago-007836	Ashbya gossypii	26.44	2.00e-34	140.00
IUUC-Ame-011358	Astyanax mexicanus	66.18	0.00e+00	673.00
IUUC-Bta-012803	Bos taurus	76.76	0.00e+00	1793.00
IUUC-Bol-015996	Brassica oleracea	43.31	1.00e-81	298.00
IUUC-Bra-016634	Brassica rapa	43.31	4.00e-82	299.00
IUUC-Cja-019199	Callithrix jacchus	74.83	0.00e+00	1657.00
IUUC-Cpo-021945	Cavia porcellus	72.98	0.00e+00	1717.00
IUUC-Csa-023485	Chlorocebus sabaeus	75.54	0.00e+00	1606.00
IUUC-Cho-024575	Choloepus hoffmanni	65.01	0.00e+00	1216.00
IUUC-Dre-028442	Danio rerio	64.11	0.00e+00	650.00
IUUC-Dno-029673	Dasypus novemcinctus	79.27	0.00e+00	1952.00
IUUC-Dor-030518	Dipodomys ordii	65.13	5.00e-126	446.00
IUUC-Ete-033088	Echinops telfairi	58.11	0.00e+00	1039.00
IUUC-Eca-033579	Equus caballus	82.21	0.00e+00	1875.00
IUUC-Eeu-034511	Erinaceus europaeus	57.55	0.00e+00	1033.00
IUUC-Fca-035792	Felis catus	84.60	0.00e+00	1845.00
IUUC-Fal-037075	Ficedula albicollis	45.63	0.00e+00	877.00
IUUC-Gga-040504	Gallus gallus	45.72	0.00e+00	866.00
IUUC-Gma-044075	Glycine max	47.88	8.00e-85	308.00
IUUC-Ggo-044798	Gorilla gorilla	70.47	0.00e+00	1388.00
IUUC-Hsa-046072	Homo sapiens	75.60	0.00e+00	1614.00
IUUC-Hvu-047620	Hordeum vulgare	41.25	2.00e-73	271.00
IUUC-Itr-048078	Ictidomys tridecemlineatus	81.27	0.00e+00	1993.00
IUUC-Lch-049867	Latimeria chalumnae	70.58	0.00e+00	957.00
IUUC-Loc-052621	Lepisosteus oculatus	64.26	0.00e+00	699.00
IUUC-Laf-054330	Loxodonta africana	92.76	0.00e+00	1263.00
IUUC-Mcc-054900	Macaca mulatta	96.70	0.00e+00	776.00
IUUC-Meu-056877	Macropus eugenii	54.95	0.00e+00	754.00
IUUC-Mga-059501	Meleagris gallopavo	43.14	0.00e+00	797.00
IUUC-Mvi-060547	Microbotryum violaceum	45.62	1.00e-80	294.00
IUUC-Mmr-060864	Microcebus murinus	79.54	0.00e+00	1922.00
IUUC-Mdo-062395	Monodelphis domestica	65.64	0.00e+00	1604.00
IUUC-Mmu-064236	Mus musculus	68.86	0.00e+00	1583.00
IUUC-Mpu-065822	Mustela putorius furo	90.03	0.00e+00	2102.00
IUUC-Mlu-067091	Myotis lucifugus	78.92	0.00e+00	1736.00
IUUC-Nle-069004	Nomascus leucogenys	74.63	0.00e+00	1647.00
IUUC-Opr-071170	Ochotona princeps	61.31	0.00e+00	1123.00
IUUC-Ont-071832	Oreochromis niloticus	60.98	0.00e+00	647.00
IUUC-Oan-073711	Ornithorhynchus anatinus	61.45	0.00e+00	1409.00
IUUC-Ocu-074596	Oryctolagus cuniculus	95.14	0.00e+00	1035.00
IUUC-Oga-088641	Otolemur garnettii	78.99	0.00e+00	1867.00
IUUC-Oar-089760	Ovis aries	73.03	0.00e+00	1644.00
IUUC-Ptr-091445	Pan troglodytes	75.15	0.00e+00	1627.00
IUUC-Pan-092484	Papio anubis	75.17	0.00e+00	1551.00
IUUC-Psi-093277	Pelodiscus sinensis	57.98	0.00e+00	1195.00
IUUC-Pma-094651	Petromyzon marinus	38.24	8.00e-57	213.00
IUUC-Pfo-096469	Poecilia formosa	66.73	0.00e+00	651.00
IUUC-Pab-097794	Pongo abelii	74.26	0.00e+00	1494.00
IUUC-Ppe-101678	Prunus persica	46.25	8.00e-82	298.00
IUUC-Pva-103238	Pteropus vampyrus	73.44	0.00e+00	1554.00
IUUC-Rno-105068	Rattus norvegicus	69.58	0.00e+00	1591.00
IUUC-Sha-106713	Sarcophilus harrisii	66.52	0.00e+00	1623.00
IUUC-Smo-108763	Selaginella moellendorffii	47.73	9.00e-81	293.00
IUUC-Sar-113340	Sorex araneus	85.13	0.00e+00	1106.00
IUUC-Tgu-117149	Taeniopygia guttata	45.79	0.00e+00	875.00
IUUC-Tru-117776	Takifugu rubripes	65.23	4.00e-176	612.00
IUUC-Tsy-118974	Tarsius syrichta	77.14	0.00e+00	1864.00
IUUC-Tni-120774	Tetraodon nigroviridis	68.36	2.00e-173	601.00
IUUC-Tca-120936	Theobroma cacao	45.93	3.00e-84	306.00
IUUC-Tbe-128006	Tupaia belangeri	73.26	1.00e-159	557.00
IUUC-Ttr-128764	Tursiops truncatus	67.76	0.00e+00	1487.00
IUUC-Vvi-131535	Vitis vinifera	46.35	1.00e-86	314.00
IUUC-Xtr-132544	Xenopus tropicalis	58.17	0.00e+00	643.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence