iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099547

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_412783; POPTR_0002s13260g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s13260	POPTR_0002s13260.1	POPTR_0002s13260.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	4.10e-43	148.2	125	313

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqv..teiscpaaecpekleeseikellveeelykryekllleevveadaal 88
           C +C+ +++ +++   + C h +C+ C++ y+++ i++  +    + cp+++c + + ++ i + l++ee  k+y+++ll+++ve ++++
   Q: 125  CGICFESHTSDRII-YADCGHLYCEICWSIYISTSINNDGAgcLMLRCPEPSCHAAIGQDMIDS-LTSEEDRKKYSDFLLRSYVEDNRTT 212
           99***999998887.66*******************99876457789*****************.699********************** PP
   S: 89   kwcpapdCslvvllekeaeklevecekcgkefCveCkeewHeglsCkelkeklakteeekeeaeskelleanskkCpkCkvyieknegCn 178
           kwcp p C++++ ++  +  + v+c +c + fC++Ckee H++++C+++k++  k++   +e+e+ +++ a  k+Cp+Ck +iekn gC+
   Q: 213  KWCPGPACEYAIEFSGADGIFDVTC-HCFTSFCWNCKEECHRPMDCDTVKRWILKNS---SESENVNYILAYCKPCPNCKRPIEKNHGCM 298
           ****************99*******.*****************************99...99**************************** PP
   S: 179  hmtCakCkaefCwlC 193
           hmtC+ C++efCwlC
   Q: 299  HMTCRVCRYEFCWLC 313
           *************** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDQKDPFFLS DDDLVGGDDG AADALLEDIR EDEIDLLKQK QQDCKILNAT ELRQRMEHDV 60
AQVSAVLSVS KTEASILLRN YNWSVGKVND AWFTDESAVR EKVGLFVKPL ISSDIVSNKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCAAA AGGTAATTGA TTTGGAAGGC GGACAGATAA TACGACGAAG TTGTGTTTAA 60
AGTCCAATAA TATAATTTCT CTTGCCGAGA ACTTTTGTTA CGTGGGATGT GACGTTGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01358--ZF_RANBP2_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s13260g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001557	Ailuropoda melanoleuca	29.65	2.00e-50	192.00
IUUC-Apl-003878	Anas platyrhynchos	29.93	3.00e-49	189.00
IUUC-Bta-012901	Bos taurus	29.65	3.00e-50	192.00
IUUC-Cja-019728	Callithrix jacchus	29.88	3.00e-51	195.00
IUUC-Cfa-020953	Canis familiaris	29.65	2.00e-50	192.00
IUUC-Csa-023769	Chlorocebus sabaeus	29.88	9.00e-51	194.00
IUUC-Dre-028490	Danio rerio	30.75	5.00e-51	194.00
IUUC-Dno-029942	Dasypus novemcinctus	29.65	2.00e-50	192.00
IUUC-Dme-031853	Drosophila melanogaster	27.71	6.00e-48	184.00
IUUC-Eca-033440	Equus caballus	29.65	1.00e-50	193.00
IUUC-Fca-036308	Felis catus	28.04	2.00e-45	176.00
IUUC-Fal-036974	Ficedula albicollis	29.93	3.00e-49	189.00
IUUC-Gmo-038642	Gadus morhua	31.17	3.00e-49	188.00
IUUC-Gga-041019	Gallus gallus	29.93	3.00e-49	189.00
IUUC-Ggo-045329	Gorilla gorilla	29.65	1.00e-50	193.00
IUUC-Hsa-046712	Homo sapiens	29.65	1.00e-50	193.00
IUUC-Itr-048370	Ictidomys tridecemlineatus	31.36	8.00e-50	190.00
IUUC-Mcc-054919	Macaca mulatta	29.88	9.00e-51	194.00
IUUC-Mga-060132	Meleagris gallopavo	29.88	4.00e-49	188.00
IUUC-Mmr-061599	Microcebus murinus	28.50	2.00e-45	176.00
IUUC-Mpu-066827	Mustela putorius furo	31.58	2.00e-48	186.00
IUUC-Mlu-067528	Myotis lucifugus	29.65	7.00e-48	184.00
IUUC-Nle-068995	Nomascus leucogenys	29.65	1.00e-50	193.00
IUUC-Ont-071650	Oreochromis niloticus	30.14	1.00e-52	199.00
IUUC-Oan-073676	Ornithorhynchus anatinus	29.77	6.00e-45	174.00
IUUC-Ocu-073761	Oryctolagus cuniculus	29.65	2.00e-50	192.00
IUUC-Ola-087204	Oryzias latipes	29.34	1.00e-52	200.00
IUUC-Oar-089205	Ovis aries	29.65	3.00e-50	192.00
IUUC-Ptr-091514	Pan troglodytes	29.65	1.00e-50	193.00
IUUC-Pca-100700	Procavia capensis	27.59	1.00e-41	163.00
IUUC-Rno-105289	Rattus norvegicus	29.41	3.00e-50	192.00
IUUC-Sha-107417	Sarcophilus harrisii	29.41	7.00e-47	181.00
IUUC-Sar-113042	Sorex araneus	29.65	4.00e-51	194.00
IUUC-Ssc-115362	Sus scrofa	29.65	1.00e-50	193.00
IUUC-Tgu-117469	Taeniopygia guttata	29.93	3.00e-49	188.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence