iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__2515__AT3G23060.1	fgenesh2_kg.3__2515__AT3G23060.1	fgenesh2_kg.3__2515__AT3G23060.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-06	28.7	16	57

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C++C ++fkd + +  C H+f+++C+ +k+        +   CP+C+
   Q: 16   CPLCNNRFKDATTISECLHTFCRSCIrNKF-----INERVKACPVCN 57
           **********999999**********5555.....4666667****7 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLTKVETKVV EPKFACPLCN NRFKDATTIS ECLHTFCRSC IRNKFINERV KACPVCNVNL 60
GVFPLHKLRS DYSWQSLKLK VDRAKTERVK AASVKSSKKK GKSLTSPVVS SSRVSSSPDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTTTTCT CTGAGAGAGA CAGAGAGAGC GAAACTTAAG AGCTGTGAGA GACCAAAACC 60
TCCCATTCGA TTCTCTCTGA GAAAACACCA ATAAAGCTAG ACACTTTTTT TTTGTGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_479814

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003651	Anas platyrhynchos	43.06	4.00e-11	60.80
IUUC-Ath-007649	Arabidopsis thaliana	79.49	0.00e+00	627.00
IUUC-Bta-012606	Bos taurus	40.00	3.00e-12	65.50
IUUC-Bol-015798	Brassica oleracea	42.17	2.00e-74	272.00
IUUC-Cho-025081	Choloepus hoffmanni	43.10	2.00e-10	58.50
IUUC-Cin-025612	Ciona intestinalis	43.75	2.00e-13	69.30
IUUC-Dme-032006	Drosophila melanogaster	36.84	8.00e-12	63.20
IUUC-Loc-052192	Lepisosteus oculatus	46.58	2.00e-12	65.50
IUUC-Laf-054108	Loxodonta africana	40.00	1.00e-12	66.20
IUUC-Mdo-062711	Monodelphis domestica	40.00	3.00e-12	65.50
IUUC-Oar-089843	Ovis aries	40.00	3.00e-12	65.50
IUUC-Pan-092667	Papio anubis	40.00	2.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence