iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011231

Ensembl Protein ID

ENSAMXP00000008412.1

UniProt Accession

W5KLF0; W5KLF0_ASTMX

Genbank Protein ID

ENSAMXP00000008412

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01100893

Gene Name

UBR1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000008188.1	ENSAMXT00000008412.1	ENSAMXP00000008412.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-07	31.9	1082	1185
E3 activity/N-recognin/UBR-box	2.30e-28	98.7	88	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kd....................................gplvlpCgHvfhadClqkw.............. 29
           C++C+e+         +                                     g+++++CgHv+ha+C+qk+              
   Q: 1082 CILCQEEQevqaqapaMVltacvqrstvltqyrgrtlstkessyplfmppdlavGTHTGSCGHVMHATCWQKYfeavqnttrnrlha 1168
           8888777755444444004444444445555555555555555555555555556999***************99999999999888 PP
   S: 30   pglknssskefrCPlCr 46
               +++++e +CPlC+
   Q: 1169 EMIIDLENGEYMCPLCK 1185
           666667899999****6 PP

E3 activity/N-recognin/UBR-box

   S: 1    slCgrvfkvgetiyeCrtCsvdetlvlCteCfakvvHkdHeyklkksggggfCdCGdteAwedgskCkkl 70
           +lCgrvfk get+y+Cr+C++d+t+vlC++Cf+++vHk+H+yk++ s+gggfCdCGd eAw++g+ C ++
   Q: 88   QLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQNSVHKGHRYKMHGSSGGGFCDCGDLEAWKTGPCCSQH 157
           68***************************************************************99987 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MAEGEKSVDG LQLSTKWWEA PDRGAAILNY IVEQVPHIYC LEAEPQPAEE EQRVQERILH 60
PLECFLFGED PRVGLEKLEH RNSGSSSQLC GRVFKEGETV YSCRDCAIDP TCVLCMDCFQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGATTCAG CTGAGGTCGC GTGCGTTACC GTGGTCACAT CGCGCGCCGT AGTGAAACAT 60
GGCGGAGGGG GAGAAGTCGG TGGACGGGCT GCAGTTGAGC ACGGTAAACA GCGCTGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003769--ClpS_core
IPR014719--Ribosomal_L7/12_C/ClpS-like
IPR011991--WHTH_DNA-bd_dom
IPR013083--Znf_RING/FYVE/PHD
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02617--ClpS
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0030163--P:protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001354	Ailuropoda melanoleuca	56.38	0.00e+00	1928.00
IUUC-Apl-004160	Anas platyrhynchos	59.23	0.00e+00	2029.00
IUUC-Aca-004982	Anolis carolinensis	56.98	0.00e+00	1964.00
IUUC-Bta-012347	Bos taurus	57.33	0.00e+00	1962.00
IUUC-Cja-018911	Callithrix jacchus	55.64	0.00e+00	1903.00
IUUC-Cfa-020991	Canis familiaris	57.07	0.00e+00	1954.00
IUUC-Cpo-021448	Cavia porcellus	56.42	0.00e+00	1922.00
IUUC-Cre-022936	Chlamydomonas reinhardtii	38.30	7.50e-02	30.80
IUUC-Csa-024255	Chlorocebus sabaeus	57.82	0.00e+00	1617.00
IUUC-Cho-024550	Choloepus hoffmanni	44.30	0.00e+00	1397.00
IUUC-Dre-028643	Danio rerio	76.32	0.00e+00	1576.00
IUUC-Dno-029427	Dasypus novemcinctus	56.02	0.00e+00	1896.00
IUUC-Dor-031073	Dipodomys ordii	52.99	0.00e+00	822.00
IUUC-Eca-033348	Equus caballus	57.37	0.00e+00	1843.00
IUUC-Eeu-034664	Erinaceus europaeus	51.90	0.00e+00	1748.00
IUUC-Fca-035604	Felis catus	55.88	0.00e+00	941.00
IUUC-Fal-037333	Ficedula albicollis	59.39	0.00e+00	2013.00
IUUC-Gmo-039363	Gadus morhua	69.90	0.00e+00	2106.00
IUUC-Gga-040486	Gallus gallus	58.20	0.00e+00	1936.00
IUUC-Gac-041985	Gasterosteus aculeatus	74.02	0.00e+00	2289.00
IUUC-Ggo-044704	Gorilla gorilla	53.00	0.00e+00	1481.00
IUUC-Hsa-046753	Homo sapiens	57.17	0.00e+00	1967.00
IUUC-Itr-048410	Ictidomys tridecemlineatus	56.78	0.00e+00	1955.00
IUUC-Lch-049904	Latimeria chalumnae	59.74	0.00e+00	1951.00
IUUC-Lpe-051516	Leersia perrieri	25.49	2.00e-31	132.00
IUUC-Loc-052624	Lepisosteus oculatus	73.28	0.00e+00	2486.00
IUUC-Laf-053857	Loxodonta africana	55.65	0.00e+00	1907.00
IUUC-Mcc-054873	Macaca mulatta	57.47	0.00e+00	1949.00
IUUC-Meu-056858	Macropus eugenii	47.85	0.00e+00	712.00
IUUC-Mga-059917	Meleagris gallopavo	58.80	0.00e+00	2029.00
IUUC-Mmr-061128	Microcebus murinus	54.00	0.00e+00	1797.00
IUUC-Mdo-062306	Monodelphis domestica	58.18	0.00e+00	1979.00
IUUC-Mmu-063389	Mus musculus	57.51	0.00e+00	1967.00
IUUC-Mpu-065983	Mustela putorius furo	57.07	0.00e+00	1964.00
IUUC-Mlu-068013	Myotis lucifugus	55.38	0.00e+00	1871.00
IUUC-Nle-070031	Nomascus leucogenys	57.29	0.00e+00	1974.00
IUUC-Opr-070551	Ochotona princeps	43.34	0.00e+00	735.00
IUUC-Ont-072035	Oreochromis niloticus	74.34	0.00e+00	2556.00
IUUC-Ocu-074930	Oryctolagus cuniculus	55.61	0.00e+00	1883.00
IUUC-Oba-075295	Oryza barthii	47.19	1.00e-14	77.00
IUUC-Obr-076117	Oryza brachyantha	25.36	6.00e-30	127.00
IUUC-Ogl-077571	Oryza glaberrima	34.77	1.00e-22	103.00
IUUC-Ogu-078497	Oryza glumaepatula	47.19	9.00e-15	77.00
IUUC-Oin-079343	Oryza indica	47.19	1.00e-14	76.60
IUUC-Oni-083099	Oryza nivara	47.19	1.00e-14	77.00
IUUC-Oru-084471	Oryza rufipogon	47.19	1.00e-14	77.00
IUUC-Osa-085336	Oryza sativa	26.23	1.00e-29	125.00
IUUC-Ola-086683	Oryzias latipes	72.33	0.00e+00	2469.00
IUUC-Oga-088017	Otolemur garnettii	55.88	0.00e+00	1565.00
IUUC-Oar-089557	Ovis aries	57.25	0.00e+00	1955.00
IUUC-Ptr-091366	Pan troglodytes	56.65	0.00e+00	1942.00
IUUC-Pan-092184	Papio anubis	57.47	0.00e+00	1949.00
IUUC-Psi-093720	Pelodiscus sinensis	58.40	0.00e+00	1962.00
IUUC-Ppa-095780	Physcomitrella patens	22.91	2.00e-26	115.00
IUUC-Pfo-097124	Poecilia formosa	73.26	0.00e+00	2539.00
IUUC-Pab-098586	Pongo abelii	57.22	0.00e+00	1973.00
IUUC-Pca-100673	Procavia capensis	52.02	0.00e+00	1001.00
IUUC-Pva-102724	Pteropus vampyrus	53.70	0.00e+00	1423.00
IUUC-Sha-106993	Sarcophilus harrisii	57.19	0.00e+00	1993.00
IUUC-Sja-107980	Schizosaccharomyces japonicus	24.19	4.00e-47	184.00
IUUC-Sit-110716	Setaria italica	26.57	6.00e-32	134.00
IUUC-Sar-113447	Sorex araneus	54.97	0.00e+00	1298.00
IUUC-Sre-115045	Sporisorium reilianum	26.73	5.00e-47	184.00
IUUC-Ssc-115768	Sus scrofa	54.51	0.00e+00	1753.00
IUUC-Tgu-116949	Taeniopygia guttata	56.90	0.00e+00	1913.00
IUUC-Tru-117782	Takifugu rubripes	70.68	0.00e+00	2440.00
IUUC-Tsy-119177	Tarsius syrichta	50.32	0.00e+00	1294.00
IUUC-Tni-120884	Tetraodon nigroviridis	65.15	0.00e+00	2228.00
IUUC-Tbe-128088	Tupaia belangeri	50.64	0.00e+00	746.00
IUUC-Ttr-129062	Tursiops truncatus	53.51	0.00e+00	1803.00
IUUC-Vpa-130578	Vicugna pacos	51.39	0.00e+00	1697.00
IUUC-Xtr-132244	Xenopus tropicalis	50.99	0.00e+00	1722.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence