iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005870

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Hypoxia-responsive family protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_906038

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_501742.1	scaffold_501742.1	scaffold_501742.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.50e-08	35.7	204	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   +  +++lp C H+fh++C+  w         + +CPlCr
   Q: 204  CAVCLNEFsdtD-KLRLLPvCSHAFHLHCIDTW------LLSNSTCPLCR 246
           ********7733.499999**************......888889****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSAVEPDMED LFQEKKRVRN PLVPLGALMT AGVLTAGLIS FRRGNSQLGQ VLMRARVVVQ 60
GATVALMVGT AYYYGDNPLL LSEIHETEAL SPKSSSAATI TLMNQKDPSS SSIVSVLCLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAAGCTGCT GCTGGAGAAG ATGAGTGCGG TAGAACCAGA CATGGAAGAT CTGTTCCAGG 60
AGAAGAAGCG TGTCAGGAAT CCTCTCGTTC CTCTCGGTTT GTCCTGATTC CTTCATTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR007667--Hypoxia_induced_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51503--HIG1
PS50089--ZF_RING_2

Pfam

PF04588--HIG_1_N
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_906038

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001193	Ailuropoda melanoleuca	47.67	3.00e-17	82.80
IUUC-Apl-003834	Anas platyrhynchos	42.42	7.00e-19	88.60
IUUC-Aca-005377	Anolis carolinensis	43.62	2.00e-16	80.10
IUUC-Ath-006611	Arabidopsis thaliana	93.39	0.00e+00	628.00
IUUC-Ame-011730	Astyanax mexicanus	41.76	1.00e-19	90.90
IUUC-Bta-013113	Bos taurus	42.70	6.00e-16	78.60
IUUC-Cja-018860	Callithrix jacchus	42.70	8.00e-16	78.20
IUUC-Cpo-022394	Cavia porcellus	42.27	7.00e-16	78.20
IUUC-Csa-023242	Chlorocebus sabaeus	42.70	7.00e-16	78.60
IUUC-Dre-028428	Danio rerio	42.55	1.00e-19	91.30
IUUC-Dno-029606	Dasypus novemcinctus	42.70	5.00e-16	79.00
IUUC-Ete-033099	Echinops telfairi	43.48	2.00e-16	80.10
IUUC-Eca-033976	Equus caballus	42.70	5.00e-16	79.00
IUUC-Eeu-034964	Erinaceus europaeus	42.70	8.00e-16	78.20
IUUC-Fca-035572	Felis catus	44.57	3.00e-17	82.80
IUUC-Fal-036981	Ficedula albicollis	43.43	1.00e-19	91.30
IUUC-Gmo-039344	Gadus morhua	42.86	1.00e-19	90.90
IUUC-Gga-041114	Gallus gallus	42.42	7.00e-19	88.60
IUUC-Gac-042220	Gasterosteus aculeatus	42.86	4.00e-19	89.00
IUUC-Ggo-044754	Gorilla gorilla	42.70	6.00e-16	78.60
IUUC-Hsa-045776	Homo sapiens	42.70	6.00e-16	78.60
IUUC-Itr-048774	Ictidomys tridecemlineatus	43.62	1.00e-16	81.30
IUUC-Lch-050541	Latimeria chalumnae	43.16	3.00e-20	92.80
IUUC-Loc-052124	Lepisosteus oculatus	44.44	3.00e-17	82.80
IUUC-Laf-054328	Loxodonta africana	42.70	4.00e-16	79.00
IUUC-Mcc-054739	Macaca mulatta	42.70	6.00e-16	78.60
IUUC-Meu-056359	Macropus eugenii	43.48	3.00e-16	79.70
IUUC-Mga-059307	Meleagris gallopavo	41.41	7.00e-18	85.10
IUUC-Mmr-060608	Microcebus murinus	42.70	4.00e-16	79.00
IUUC-Mdo-062162	Monodelphis domestica	42.42	5.00e-18	85.50
IUUC-Mmu-064278	Mus musculus	43.62	5.00e-16	79.00
IUUC-Mpu-065838	Mustela putorius furo	48.28	5.00e-18	85.50
IUUC-Mlu-066930	Myotis lucifugus	42.70	5.00e-16	79.00
IUUC-Nle-069311	Nomascus leucogenys	43.62	4.00e-16	79.30
IUUC-Ont-072086	Oreochromis niloticus	42.86	9.00e-19	88.20
IUUC-Oan-073036	Ornithorhynchus anatinus	42.70	5.00e-16	79.00
IUUC-Ocu-073795	Oryctolagus cuniculus	42.70	7.00e-16	78.60
IUUC-Ola-087452	Oryzias latipes	41.76	4.00e-18	85.90
IUUC-Oga-088022	Otolemur garnettii	41.84	8.00e-17	81.60
IUUC-Oar-089348	Ovis aries	42.70	7.00e-16	78.20
IUUC-Ptr-090604	Pan troglodytes	42.70	6.00e-16	78.60
IUUC-Pan-092322	Papio anubis	42.70	6.00e-16	78.60
IUUC-Psi-093735	Pelodiscus sinensis	42.00	2.00e-17	83.60
IUUC-Pfo-096637	Poecilia formosa	42.86	4.00e-19	89.40
IUUC-Pab-098671	Pongo abelii	42.70	6.00e-16	78.60
IUUC-Pca-100263	Procavia capensis	43.18	3.00e-16	79.70
IUUC-Pva-102709	Pteropus vampyrus	41.57	7.00e-15	75.10
IUUC-Rno-105759	Rattus norvegicus	43.62	7.00e-16	78.60
IUUC-Sha-106681	Sarcophilus harrisii	41.41	2.00e-17	83.60
IUUC-Ssc-115738	Sus scrofa	42.70	5.00e-16	79.00
IUUC-Tgu-117477	Taeniopygia guttata	43.43	6.00e-20	92.00
IUUC-Tru-118302	Takifugu rubripes	42.55	2.00e-19	90.10
IUUC-Tni-119675	Tetraodon nigroviridis	42.55	2.00e-19	90.10
IUUC-Tbe-127543	Tupaia belangeri	42.70	4.00e-16	79.00
IUUC-Vpa-130058	Vicugna pacos	42.70	5.00e-16	78.60
IUUC-Xtr-132663	Xenopus tropicalis	42.70	4.00e-16	79.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence