iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtg 33
           H d+v+c+afs+tll+++s D+ti++++l+++
   Q: 11   HGDDVSCCAFSSTLLATCSLDKTIRLYSLSDF 42
           9*********55****************9775 PP

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p+ef+CpI+ elM+dPv++++G++y+r+++e w+ ++++t+P+t+  l +  l+Pn tl+  i++w+e+++
   Q: 403  IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLKMAINRWLETHQ 474
           8********************************************************************997 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcv..htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcl 129
           kl+++l +h + v+++ fs++  +l+t+s D+ti++++ls++  +  + lk h++ v ++sfspsg++l+s s d t  +w  ++g  l
   Q: 3    KLIHTLADHGDDVSCCAFSST--LLATCSLDKTIRLYSLSDFAELphSPLKFHTYAVHCCSFSPSGHVLASCSTDGTTVLWSAHSGHTL 89
           789******************..9****************76655115689************************************** PP
   S: 130  eetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
             ++++  + v++ +++pd+ +l+sG++D+ v lW+  + kl r  +  +++s    +f+++g  lv+gs  g++++wd +  +c+++ 
   Q: 90   TVLEQPGGSPVRVCCFSPDSTYLASGAADGSVVLWNAHSYKLYRCGSV-KDSSLVACAFSPDGGLLVTGSSGGDLTVWDDRM-RCLHSE 176
           9788888899*******************************9999987.99999999***********************65.5***** PP
   S: 219  nghtdnvksvrfspnderlvsgss 242
           ++h+  +++  fs      +sg++
   Q: 177  KAHDLGITCCSFS---SQPLSGGE 197
           ************9...55556655 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MVKLIHTLAD HGDDVSCCAF SSTLLATCSL DKTIRLYSLS DFAELPHSPL KFHTYAVHCC 60
SFSPSGHVLA SCSTDGTTVL WSAHSGHTLT VLEQPGGSPV RVCCFSPDST YLASGAADGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAGACTCT GCCCAGTGAG CTGCCCAGCC CGGGGCCGAG CCCGGGGTAG TCGTGCAGCC 60
TTCGTGACCT CAGAACCCGG CGGTTCCCGC GCCGGGCAAG CGTGACCTCG ACCGCGGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001660--SAM
IPR013761--SAM/pointed
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50105--SAM_DOMAIN
PS51698--U_BOX
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07647--SAM_2
PF04564--U-box
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00454--SAM
SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001614	Ailuropoda melanoleuca	84.66	0.00e+00	845.00
IUUC-Apl-003529	Anas platyrhynchos	71.85	0.00e+00	722.00
IUUC-Aca-004257	Anolis carolinensis	67.56	0.00e+00	664.00
IUUC-Ame-011357	Astyanax mexicanus	52.31	1.00e-116	412.00
IUUC-Bta-013032	Bos taurus	79.66	0.00e+00	803.00
IUUC-Cja-018743	Callithrix jacchus	83.82	0.00e+00	838.00
IUUC-Cfa-021197	Canis familiaris	83.61	0.00e+00	843.00
IUUC-Cpo-022279	Cavia porcellus	84.45	0.00e+00	835.00
IUUC-Csa-023954	Chlorocebus sabaeus	83.61	0.00e+00	832.00
IUUC-Cho-025083	Choloepus hoffmanni	66.40	3.00e-139	488.00
IUUC-Cin-025786	Ciona intestinalis	35.28	6.00e-80	291.00
IUUC-Dre-028087	Danio rerio	55.97	8.00e-142	496.00
IUUC-Dno-028919	Dasypus novemcinctus	83.61	0.00e+00	835.00
IUUC-Dor-031112	Dipodomys ordii	82.98	0.00e+00	820.00
IUUC-Ete-032405	Echinops telfairi	81.34	2.00e-168	584.00
IUUC-Eca-033254	Equus caballus	81.72	0.00e+00	811.00
IUUC-Eeu-034545	Erinaceus europaeus	77.52	0.00e+00	754.00
IUUC-Fca-035482	Felis catus	83.82	0.00e+00	837.00
IUUC-Fal-036976	Ficedula albicollis	57.41	1.00e-152	532.00
IUUC-Gmo-039213	Gadus morhua	55.58	2.00e-137	482.00
IUUC-Gga-040561	Gallus gallus	70.23	0.00e+00	704.00
IUUC-Gac-041471	Gasterosteus aculeatus	57.11	2.00e-139	489.00
IUUC-Ggo-045503	Gorilla gorilla	83.82	0.00e+00	837.00
IUUC-Hsa-045910	Homo sapiens	83.82	0.00e+00	837.00
IUUC-Hvu-047829	Hordeum vulgare	42.06	1.00e-18	87.80
IUUC-Itr-048214	Ictidomys tridecemlineatus	83.29	0.00e+00	649.00
IUUC-Loc-052307	Lepisosteus oculatus	59.21	3.00e-164	571.00
IUUC-Laf-053587	Loxodonta africana	82.56	0.00e+00	820.00
IUUC-Mcc-055679	Macaca mulatta	83.61	0.00e+00	837.00
IUUC-Meu-055962	Macropus eugenii	66.18	1.00e-177	615.00
IUUC-Mga-059652	Meleagris gallopavo	70.23	0.00e+00	704.00
IUUC-Mmr-060943	Microcebus murinus	82.43	0.00e+00	813.00
IUUC-Mdo-062592	Monodelphis domestica	78.08	0.00e+00	784.00
IUUC-Mmu-063577	Mus musculus	92.21	0.00e+00	907.00
IUUC-Mpu-066422	Mustela putorius furo	84.66	0.00e+00	840.00
IUUC-Mlu-067250	Myotis lucifugus	80.67	0.00e+00	803.00
IUUC-Nle-069517	Nomascus leucogenys	83.82	0.00e+00	837.00
IUUC-Opr-070776	Ochotona princeps	82.56	0.00e+00	817.00
IUUC-Ont-071821	Oreochromis niloticus	56.88	2.00e-148	519.00
IUUC-Oan-073706	Ornithorhynchus anatinus	77.47	0.00e+00	780.00
IUUC-Ocu-074766	Oryctolagus cuniculus	77.45	0.00e+00	752.00
IUUC-Ola-086531	Oryzias latipes	57.44	1.00e-148	519.00
IUUC-Oga-088388	Otolemur garnettii	81.93	0.00e+00	817.00
IUUC-Oar-089748	Ovis aries	80.46	0.00e+00	811.00
IUUC-Ptr-090616	Pan troglodytes	83.51	0.00e+00	828.00
IUUC-Pan-091769	Papio anubis	83.14	4.00e-173	600.00
IUUC-Psi-093334	Pelodiscus sinensis	74.37	0.00e+00	688.00
IUUC-Pma-094383	Petromyzon marinus	48.83	9.00e-132	463.00
IUUC-Pfo-096801	Poecilia formosa	54.91	7.00e-145	506.00
IUUC-Pab-098139	Pongo abelii	82.47	0.00e+00	669.00
IUUC-Pca-100523	Procavia capensis	79.18	7.00e-151	526.00
IUUC-Pva-102286	Pteropus vampyrus	80.67	0.00e+00	786.00
IUUC-Sha-107499	Sarcophilus harrisii	78.57	0.00e+00	786.00
IUUC-Sar-113389	Sorex araneus	79.41	0.00e+00	769.00
IUUC-Tgu-116769	Taeniopygia guttata	70.17	0.00e+00	689.00
IUUC-Tru-118774	Takifugu rubripes	54.12	6.00e-141	494.00
IUUC-Tsy-119595	Tarsius syrichta	70.87	1.00e-165	575.00
IUUC-Tni-119850	Tetraodon nigroviridis	57.51	1.00e-145	509.00
IUUC-Tbe-127938	Tupaia belangeri	74.43	6.00e-132	463.00
IUUC-Ttr-128193	Tursiops truncatus	81.84	0.00e+00	692.00
IUUC-Vpa-130275	Vicugna pacos	83.19	0.00e+00	830.00
IUUC-Xtr-131982	Xenopus tropicalis	59.21	4.00e-162	564.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence