iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074255

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02051580

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000012934.2	ENSOCUT00000012929.2	ENSOCUP00000011129.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-39	129.8	53	88
UBD/Beta-Prp	3.80e-52	177.4	46	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++++++++ +d +llvs+s Dg++ vWD+ t +
   Q: 53   GHLAKIYAMHWaTDsKLLVSASQDGKLIVWDTYTTN 88
           899*********888****************87765 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            + r+l gh a+++a+ +  d+k+lv++s+D+ + vwd  t   vh++   ++ v+++++ psg++++ G+ d++  ++ l++++   +
   Q: 46   RTRRTLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVK 134
           45689****************************************************************************99987777 PP
   S: 132  ...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
               ls h+g  +c ++ + +n +v++s D+t+ lWd++tg+  + + g ht++  sl+++++ k ++sg++d + klwd+++g+c +t
   Q: 135  vsrELSAHTGYLSCCRFLD-DNNIVTSSGDTTCALWDIETGQQKTVFVG-HTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQT 221
           778***************9.566899**********************9.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
           ++gh++ ++ + f+pn+e + +gs+D s r++dlr ++ l++++++
   Q: 222  FTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHE 267
           **************************************99999873 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MGEMEQLRQE AEQLKKQIAD ARKACADITL AELVSGLEVV GRVQMRTRRT LRGHLAKIYA 60
MHWATDSKLL VSASQDGKLI VWDTYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCAGCGGGT GTCGCAGCCG AGGGAGTGAG GAGGCGCCTG GGAACGGAGC TGGAAAACTG 60
GGAGCCGTCC AGCCAGAGCC CAAGTAAGAG GGAACTGGCC GGGCTCTACT CTCTGGGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030425--C:dendrite
GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

KEGG

ocu:100346625

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	49.26	4.00e-75	274.00
IUUC-Aml-002370	Ailuropoda melanoleuca	99.41	0.00e+00	701.00
IUUC-Atr-002610	Amborella trichopoda	49.35	9.00e-87	313.00
IUUC-Apl-004079	Anas platyrhynchos	93.53	0.00e+00	674.00
IUUC-Aca-004539	Anolis carolinensis	90.00	0.00e+00	652.00
IUUC-Aly-006025	Arabidopsis lyrata	50.32	1.00e-83	303.00
IUUC-Ath-006617	Arabidopsis thaliana	50.97	2.00e-83	302.00
IUUC-Bta-012810	Bos taurus	98.82	0.00e+00	698.00
IUUC-Bci-013621	Botrytis cinerea	66.37	2.00e-131	461.00
IUUC-Bdi-014785	Brachypodium distachyon	49.36	3.00e-86	311.00
IUUC-Bol-015759	Brassica oleracea	51.12	1.00e-81	298.00
IUUC-Bra-017618	Brassica rapa	50.32	5.00e-84	304.00
IUUC-Cja-019894	Callithrix jacchus	97.94	0.00e+00	692.00
IUUC-Cfa-020140	Canis familiaris	98.82	0.00e+00	695.00
IUUC-Cpo-021908	Cavia porcellus	98.82	0.00e+00	698.00
IUUC-Csa-023321	Chlorocebus sabaeus	97.65	0.00e+00	688.00
IUUC-Dno-029783	Dasypus novemcinctus	96.78	0.00e+00	629.00
IUUC-Dse-031388	Dothistroma septosporum	66.67	3.00e-137	481.00
IUUC-Ete-032435	Echinops telfairi	91.18	2.00e-180	624.00
IUUC-Eca-034169	Equus caballus	99.41	0.00e+00	699.00
IUUC-Eeu-034631	Erinaceus europaeus	92.21	2.00e-166	578.00
IUUC-Fca-035392	Felis catus	98.82	0.00e+00	697.00
IUUC-Fal-036902	Ficedula albicollis	92.06	0.00e+00	667.00
IUUC-Gga-040655	Gallus gallus	92.08	0.00e+00	658.00
IUUC-Ggo-045346	Gorilla gorilla	97.65	0.00e+00	688.00
IUUC-Hsa-046203	Homo sapiens	97.65	0.00e+00	688.00
IUUC-Hvu-047596	Hordeum vulgare	49.36	3.00e-85	308.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	97.94	0.00e+00	693.00
IUUC-Lpe-051040	Leersia perrieri	49.04	6.00e-87	314.00
IUUC-Loc-052327	Lepisosteus oculatus	86.76	0.00e+00	635.00
IUUC-Laf-053616	Loxodonta africana	98.53	0.00e+00	697.00
IUUC-Mcc-055798	Macaca mulatta	97.65	0.00e+00	688.00
IUUC-Mtr-058752	Medicago truncatula	47.91	2.00e-85	308.00
IUUC-Mga-059516	Meleagris gallopavo	93.53	0.00e+00	673.00
IUUC-Mmr-061701	Microcebus murinus	99.41	0.00e+00	699.00
IUUC-Mdo-061879	Monodelphis domestica	94.71	0.00e+00	674.00
IUUC-Mmu-063132	Mus musculus	98.82	0.00e+00	697.00
IUUC-Mac-064871	Musa acuminata	48.72	5.00e-84	304.00
IUUC-Mpu-066365	Mustela putorius furo	98.82	0.00e+00	700.00
IUUC-Mlu-067628	Myotis lucifugus	97.65	0.00e+00	689.00
IUUC-Nle-069015	Nomascus leucogenys	96.18	0.00e+00	673.00
IUUC-Opr-070261	Ochotona princeps	99.71	0.00e+00	702.00
IUUC-Oba-075818	Oryza barthii	47.38	6.00e-84	304.00
IUUC-Obr-076229	Oryza brachyantha	48.72	5.00e-84	304.00
IUUC-Ogl-077730	Oryza glaberrima	49.36	3.00e-87	315.00
IUUC-Ogu-078583	Oryza glumaepatula	48.85	6.00e-69	253.00
IUUC-Oin-079661	Oryza indica	48.72	4.00e-84	304.00
IUUC-Olo-080225	Oryza longistaminata	48.85	6.00e-69	253.00
IUUC-Oni-082161	Oryza nivara	49.04	7.00e-87	313.00
IUUC-Opu-084072	Oryza punctata	49.36	3.00e-87	315.00
IUUC-Oru-084316	Oryza rufipogon	48.72	4.00e-84	304.00
IUUC-Osa-085380	Oryza sativa	48.72	4.00e-84	304.00
IUUC-Oga-088685	Otolemur garnettii	99.71	0.00e+00	702.00
IUUC-Oar-089373	Ovis aries	95.60	0.00e+00	661.00
IUUC-Ptr-090627	Pan troglodytes	95.00	0.00e+00	668.00
IUUC-Pan-092347	Papio anubis	97.64	0.00e+00	687.00
IUUC-Psi-092965	Pelodiscus sinensis	93.53	0.00e+00	674.00
IUUC-Ppa-095726	Physcomitrella patens	45.05	5.00e-75	274.00
IUUC-Pab-098335	Pongo abelii	97.06	0.00e+00	686.00
IUUC-Pop-099370	Populus trichocarpa	49.35	3.00e-87	315.00
IUUC-Ppe-102016	Prunus persica	47.74	1.00e-84	306.00
IUUC-Pva-102666	Pteropus vampyrus	99.71	0.00e+00	699.00
IUUC-Rno-105834	Rattus norvegicus	98.82	0.00e+00	664.00
IUUC-Sha-107128	Sarcophilus harrisii	94.71	0.00e+00	671.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	66.57	4.00e-131	461.00
IUUC-Smo-109652	Selaginella moellendorffii	43.70	1.00e-73	269.00
IUUC-Sit-110441	Setaria italica	49.04	1.00e-86	313.00
IUUC-Sly-111784	Solanum lycopersicum	49.35	9.00e-85	306.00
IUUC-Stu-112400	Solanum tuberosum	49.35	9.00e-85	306.00
IUUC-Sbi-114038	Sorghum bicolor	48.40	2.00e-85	309.00
IUUC-Ssc-115886	Sus scrofa	99.12	0.00e+00	698.00
IUUC-Tgu-116461	Taeniopygia guttata	92.65	0.00e+00	671.00
IUUC-Tca-121224	Theobroma cacao	49.68	2.00e-87	315.00
IUUC-Tae-124407	Triticum aestivum	49.68	2.00e-85	309.00
IUUC-Tur-126755	Triticum urartu	49.20	5.00e-86	313.00
IUUC-Tbe-127694	Tupaia belangeri	81.76	2.00e-149	521.00
IUUC-Vvi-131162	Vitis vinifera	49.68	9.00e-87	313.00
IUUC-Xtr-132928	Xenopus tropicalis	88.24	8.00e-179	619.00
IUUC-Yli-134396	Yarrowia lipolytica	31.65	7.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence