iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116164

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU468433

Gene Name

RNF139

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000029106.2	ENSSSCT00000030960.2	ENSSSCP00000025132.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-08	35.2	547	585

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiC+ +f +  +++pC+H fha Cl kw       + +++CP C
   Q: 547  CAICYHEFTTSARITPCNHYFHALCLRKW------LYIQDTCPMC 585
           ********999******************......********** PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MAAVGPPQQQ VRMAHQQVWA ALEVALRVPC LYIIDAIFNS YYDSSQSRFC FGLQVFLRLF 60
GILVSSIVLI LSQRSLFKFY MYSSAFLLAA TSVLVNYYAA LHIDFYGAYN TSAFGIELLP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACACCCAGA GGCCTCCCGG AAGCCGCCGC CGCAGCCTCA GCCGCCGCCT CCGCCGCCTG 60
CTCCAGCTCG AGAGACGCGA GCGGGCGGCG GGGCGGGCCG TGAGAAAGAC TCGAGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025754--TRC8_N_dom
IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13705--TRC8_N
PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ssc:100156613

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002401	Ailuropoda melanoleuca	96.83	0.00e+00	1221.00
IUUC-Aca-005326	Anolis carolinensis	77.85	0.00e+00	973.00
IUUC-Ame-011687	Astyanax mexicanus	74.75	0.00e+00	872.00
IUUC-Bta-013394	Bos taurus	97.14	0.00e+00	1266.00
IUUC-Cja-019499	Callithrix jacchus	95.34	0.00e+00	1264.00
IUUC-Cfa-020357	Canis familiaris	96.69	0.00e+00	1226.00
IUUC-Cpo-021924	Cavia porcellus	94.77	0.00e+00	1157.00
IUUC-Csa-023513	Chlorocebus sabaeus	95.79	0.00e+00	1243.00
IUUC-Cho-024285	Choloepus hoffmanni	89.92	0.00e+00	1091.00
IUUC-Dre-028660	Danio rerio	68.19	0.00e+00	791.00
IUUC-Dno-029463	Dasypus novemcinctus	95.52	2.00e-166	578.00
IUUC-Ete-032368	Echinops telfairi	87.71	0.00e+00	1167.00
IUUC-Eca-034325	Equus caballus	95.94	0.00e+00	1201.00
IUUC-Fca-035537	Felis catus	94.95	0.00e+00	1174.00
IUUC-Gga-041071	Gallus gallus	82.17	0.00e+00	990.00
IUUC-Gac-042483	Gasterosteus aculeatus	67.93	0.00e+00	904.00
IUUC-Ggo-044672	Gorilla gorilla	95.49	0.00e+00	1240.00
IUUC-Hsa-045836	Homo sapiens	95.04	0.00e+00	1208.00
IUUC-Itr-048588	Ictidomys tridecemlineatus	95.43	0.00e+00	1246.00
IUUC-Lch-050073	Latimeria chalumnae	73.05	0.00e+00	976.00
IUUC-Loc-052908	Lepisosteus oculatus	70.78	0.00e+00	946.00
IUUC-Laf-053519	Loxodonta africana	93.68	0.00e+00	1258.00
IUUC-Mcc-054674	Macaca mulatta	93.97	9.00e-105	372.00
IUUC-Mor-057262	Magnaporthe oryzae	30.77	2.00e-08	54.30
IUUC-Mga-059922	Meleagris gallopavo	85.74	0.00e+00	955.00
IUUC-Mmr-061452	Microcebus murinus	95.35	0.00e+00	1207.00
IUUC-Mdo-062412	Monodelphis domestica	89.73	0.00e+00	1177.00
IUUC-Mmu-063147	Mus musculus	93.56	0.00e+00	1214.00
IUUC-Mpu-065929	Mustela putorius furo	96.84	0.00e+00	1230.00
IUUC-Mlu-067899	Myotis lucifugus	92.79	0.00e+00	1201.00
IUUC-Nle-070083	Nomascus leucogenys	95.49	0.00e+00	1238.00
IUUC-Opr-070461	Ochotona princeps	91.02	0.00e+00	1208.00
IUUC-Ont-072256	Oreochromis niloticus	70.77	0.00e+00	915.00
IUUC-Ocu-073748	Oryctolagus cuniculus	92.66	0.00e+00	1187.00
IUUC-Oga-088565	Otolemur garnettii	95.89	0.00e+00	1230.00
IUUC-Ptr-091422	Pan troglodytes	95.34	0.00e+00	1239.00
IUUC-Pan-092331	Papio anubis	95.79	0.00e+00	1241.00
IUUC-Psi-092933	Pelodiscus sinensis	83.87	0.00e+00	939.00
IUUC-Pfo-097466	Poecilia formosa	64.76	0.00e+00	914.00
IUUC-Pab-098702	Pongo abelii	95.34	0.00e+00	1238.00
IUUC-Pca-100125	Procavia capensis	91.24	0.00e+00	1199.00
IUUC-Pva-102628	Pteropus vampyrus	96.08	0.00e+00	1221.00
IUUC-Rno-104886	Rattus norvegicus	93.45	0.00e+00	1222.00
IUUC-Sha-106702	Sarcophilus harrisii	86.87	0.00e+00	1150.00
IUUC-Tgu-116829	Taeniopygia guttata	84.03	0.00e+00	980.00
IUUC-Tru-118557	Takifugu rubripes	66.37	0.00e+00	872.00
IUUC-Tni-120006	Tetraodon nigroviridis	60.94	0.00e+00	758.00
IUUC-Tbe-127664	Tupaia belangeri	94.87	0.00e+00	1226.00
IUUC-Ttr-129144	Tursiops truncatus	96.84	0.00e+00	1285.00
IUUC-Vpa-130226	Vicugna pacos	96.84	0.00e+00	1259.00
IUUC-Xtr-132461	Xenopus tropicalis	71.56	0.00e+00	913.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence