iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-039929

Ensembl Protein ID

GGTG_06066T0

UniProt Accession

J3NXR1; J3NXR1_GAGT3

Genbank Protein ID

EJT76144.1

Protein Name

Lid2 complex component lid2

Genbank Nucleotide ID

ADBI01000530

Gene Name

GGTG_06066

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_06066	GGTG_06066T0	GGTG_06066T0
GGTG_06066	GGTG_06066T1	GGTG_06066T1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.40e-13	49.6	1333	1379

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C+++++++  ++eCe C+ew+H +Clk++   ++++++k++Cp C+
   Q: 1333 VFC-ICRRPESGM--MIECELCHEWYHGKCLKIA-RGKVREDDKYTCPICD 1379
           79*.*******86..*******************.999999999******6 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MAPAPSAGAS LSAAAGGGSA STNASARGSP AVNASVSHGS SNGGSKANTA PVNSNGYHPN 60
NPQQRTLSSM TSSPLDLNSV ERRGQPTASR EPPKRKTRPH DLEEAPTYYP TAEEWNDPME 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTTTCCAAA CAAAACTCAA CCCTCACCCT CGCCCTGCGT CGGCGAGCCC CGTCCGCTGC 60
ATGGGCCAGG TTATTCGCCC GTGTTTTCGT CAACGCACGT TTTCAAATTT TCTCCCTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	37.83	7.00e-83	301.00
IUUC-Aml-002061	Ailuropoda melanoleuca	30.16	2.00e-109	389.00
IUUC-Atr-002595	Amborella trichopoda	37.05	5.00e-86	311.00
IUUC-Apl-003770	Anas platyrhynchos	29.35	1.00e-99	357.00
IUUC-Aca-004712	Anolis carolinensis	29.86	1.00e-104	373.00
IUUC-Aly-006097	Arabidopsis lyrata	41.67	2.00e-08	54.70
IUUC-Acl-008162	Aspergillus clavatus	56.50	0.00e+00	1695.00
IUUC-Afl-008625	Aspergillus flavus	56.87	0.00e+00	1647.00
IUUC-Afu-008796	Aspergillus fumigatus	55.71	0.00e+00	1664.00
IUUC-Ani-009139	Aspergillus nidulans	54.96	0.00e+00	1633.00
IUUC-Aor-010155	Aspergillus oryzae	57.01	0.00e+00	1649.00
IUUC-Ate-010453	Aspergillus terreus	55.40	0.00e+00	1623.00
IUUC-Ame-011323	Astyanax mexicanus	33.98	2.00e-106	379.00
IUUC-Bgr-012241	Blumeria graminis	60.57	0.00e+00	1890.00
IUUC-Bta-012902	Bos taurus	30.25	1.00e-109	390.00
IUUC-Bci-013992	Botrytis cinerea	62.88	0.00e+00	1987.00
IUUC-Bdi-014050	Brachypodium distachyon	36.70	1.00e-84	307.00
IUUC-Cja-018988	Callithrix jacchus	30.26	6.00e-110	391.00
IUUC-Cfa-020212	Canis familiaris	29.49	3.00e-104	372.00
IUUC-Cpo-022340	Cavia porcellus	32.73	6.00e-100	357.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	40.82	7.00e-07	43.10
IUUC-Csa-023575	Chlorocebus sabaeus	29.86	9.00e-109	387.00
IUUC-Cho-024823	Choloepus hoffmanni	37.39	2.00e-93	336.00
IUUC-Cin-025321	Ciona intestinalis	32.20	1.00e-112	400.00
IUUC-Csv-026185	Ciona savignyi	29.49	1.00e-109	390.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	69.73	0.00e+00	2182.00
IUUC-Cne-026851	Cryptococcus neoformans	34.49	3.00e-147	515.00
IUUC-Cme-027118	Cyanidioschyzon merolae	32.69	3.00e-05	42.00
IUUC-Dre-027909	Danio rerio	30.40	8.00e-106	377.00
IUUC-Dno-029473	Dasypus novemcinctus	29.89	9.00e-106	377.00
IUUC-Dor-030226	Dipodomys ordii	30.15	6.00e-76	278.00
IUUC-Dse-031479	Dothistroma septosporum	51.85	0.00e+00	1542.00
IUUC-Dme-032021	Drosophila melanogaster	32.77	1.00e-111	397.00
IUUC-Ete-032760	Echinops telfairi	28.72	1.00e-62	234.00
IUUC-Eca-034265	Equus caballus	30.30	8.00e-110	390.00
IUUC-Eeu-034692	Erinaceus europaeus	31.26	1.00e-92	333.00
IUUC-Fca-035476	Felis catus	30.19	1.00e-109	390.00
IUUC-Fal-037631	Ficedula albicollis	32.36	2.00e-101	362.00
IUUC-Fox-037694	Fusarium oxysporum	57.95	0.00e+00	1608.00
IUUC-Fso-038127	Fusarium solani	62.34	0.00e+00	2092.00
IUUC-Gmo-039522	Gadus morhua	32.87	7.00e-103	367.00
IUUC-Gga-040802	Gallus gallus	30.16	1.00e-100	360.00
IUUC-Gac-042566	Gasterosteus aculeatus	29.73	2.00e-112	399.00
IUUC-Gma-042675	Glycine max	37.56	7.00e-79	288.00
IUUC-Ggo-044524	Gorilla gorilla	30.16	3.00e-108	385.00
IUUC-Hsa-045821	Homo sapiens	29.86	8.00e-108	384.00
IUUC-Itr-048297	Ictidomys tridecemlineatus	29.27	2.00e-102	366.00
IUUC-Kpa-049245	Komagataella pastoris	24.13	7.00e-43	168.00
IUUC-Lch-050517	Latimeria chalumnae	33.74	8.00e-105	374.00
IUUC-Lpe-051537	Leersia perrieri	28.40	4.00e-84	305.00
IUUC-Loc-052550	Lepisosteus oculatus	29.81	6.00e-107	381.00
IUUC-Laf-053761	Loxodonta africana	29.48	4.00e-103	368.00
IUUC-Mcc-055672	Macaca mulatta	29.86	2.00e-108	385.00
IUUC-Meu-056643	Macropus eugenii	31.30	4.00e-97	348.00
IUUC-Mor-057198	Magnaporthe oryzae	74.81	0.00e+00	2617.00
IUUC-Mpo-057317	Magnaporthe poae	92.74	0.00e+00	3255.00
IUUC-Mtr-058113	Medicago truncatula	29.65	1.00e-78	287.00
IUUC-Mga-059358	Meleagris gallopavo	29.65	1.00e-100	360.00
IUUC-Mvi-060436	Microbotryum violaceum	40.82	3.00e-09	55.10
IUUC-Mmr-060968	Microcebus murinus	30.12	1.00e-110	393.00
IUUC-Mdo-061957	Monodelphis domestica	28.53	2.00e-103	369.00
IUUC-Mmu-063614	Mus musculus	32.77	6.00e-101	361.00
IUUC-Mac-065069	Musa acuminata	34.78	4.00e-04	40.40
IUUC-Mpu-066349	Mustela putorius furo	30.16	3.00e-109	389.00
IUUC-Mlu-067363	Myotis lucifugus	30.36	3.00e-111	395.00
IUUC-Nfi-068430	Neosartorya fischeri	57.66	0.00e+00	1690.00
IUUC-Ncr-068763	Neurospora crassa	67.47	0.00e+00	2218.00
IUUC-Nle-070142	Nomascus leucogenys	29.98	9.00e-108	384.00
IUUC-Opr-071002	Ochotona princeps	44.15	1.00e-73	271.00
IUUC-Ont-072471	Oreochromis niloticus	33.42	6.00e-104	371.00
IUUC-Oan-073568	Ornithorhynchus anatinus	30.46	5.00e-103	368.00
IUUC-Ocu-074164	Oryctolagus cuniculus	30.27	2.00e-109	389.00
IUUC-Oba-075388	Oryza barthii	27.12	1.00e-68	254.00
IUUC-Obr-076296	Oryza brachyantha	34.04	1.00e-77	284.00
IUUC-Ogl-077886	Oryza glaberrima	35.71	3.00e-11	62.80
IUUC-Ogu-079040	Oryza glumaepatula	26.33	2.00e-68	253.00
IUUC-Olo-080668	Oryza longistaminata	35.71	8.00e-11	62.40
IUUC-Ome-081764	Oryza meridionalis	28.53	3.00e-81	296.00
IUUC-Oni-083012	Oryza nivara	27.12	8.00e-69	254.00
IUUC-Opu-083164	Oryza punctata	37.19	2.00e-79	290.00
IUUC-Oru-084630	Oryza rufipogon	27.08	5.00e-69	255.00
IUUC-Osa-085487	Oryza sativa	35.71	3.00e-11	62.40
IUUC-Ola-086448	Oryzias latipes	30.12	7.00e-104	370.00
IUUC-Oga-088350	Otolemur garnettii	30.16	9.00e-110	390.00
IUUC-Oar-090045	Ovis aries	30.15	2.00e-109	389.00
IUUC-Ptr-091199	Pan troglodytes	30.22	2.00e-109	389.00
IUUC-Pan-092094	Papio anubis	30.60	3.00e-110	392.00
IUUC-Psi-093918	Pelodiscus sinensis	33.15	2.00e-103	369.00
IUUC-Pma-094137	Petromyzon marinus	30.90	8.00e-100	357.00
IUUC-Pno-094879	Phaeosphaeria nodorum	54.56	0.00e+00	1595.00
IUUC-Pfo-097266	Poecilia formosa	29.93	5.00e-107	381.00
IUUC-Pab-098576	Pongo abelii	29.86	7.00e-108	384.00
IUUC-Pop-099691	Populus trichocarpa	42.59	4.00e-08	52.00
IUUC-Pca-100446	Procavia capensis	32.93	2.00e-93	336.00
IUUC-Ppe-101504	Prunus persica	37.61	4.00e-81	295.00
IUUC-Pva-103035	Pteropus vampyrus	32.78	5.00e-99	355.00
IUUC-Pgr-103434	Puccinia graminis	37.91	5.00e-39	153.00
IUUC-Pte-104195	Pyrenophora teres	56.60	0.00e+00	1626.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	56.27	0.00e+00	1615.00
IUUC-Rno-105664	Rattus norvegicus	29.58	2.00e-109	389.00
IUUC-Sce-106207	Saccharomyces cerevisiae	36.62	1.00e-71	263.00
IUUC-Sha-107506	Sarcophilus harrisii	29.28	8.00e-107	380.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	29.92	8.00e-144	503.00
IUUC-Spo-108283	Schizosaccharomyces pombe	31.81	4.00e-152	531.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	63.32	0.00e+00	2026.00
IUUC-Smo-109122	Selaginella moellendorffii	34.55	3.00e-07	48.90
IUUC-Sit-110534	Setaria italica	36.11	5.00e-87	315.00
IUUC-Sly-111298	Solanum lycopersicum	37.64	5.00e-85	308.00
IUUC-Stu-111932	Solanum tuberosum	45.71	2.00e-06	44.70
IUUC-Sar-113052	Sorex araneus	29.69	5.00e-108	385.00
IUUC-Sbi-114173	Sorghum bicolor	39.53	2.00e-06	45.10
IUUC-Sre-115161	Sporisorium reilianum	34.59	0.00e+00	687.00
IUUC-Ssc-116132	Sus scrofa	31.35	8.00e-101	360.00
IUUC-Tgu-117452	Taeniopygia guttata	29.57	1.00e-98	353.00
IUUC-Tru-118604	Takifugu rubripes	30.70	1.00e-116	413.00
IUUC-Tsy-119271	Tarsius syrichta	28.98	4.00e-89	322.00
IUUC-Tni-120779	Tetraodon nigroviridis	30.06	7.00e-114	404.00
IUUC-Tca-121478	Theobroma cacao	37.14	1.00e-84	307.00
IUUC-Tre-122213	Trichoderma reesei	57.91	0.00e+00	1920.00
IUUC-Tvi-122263	Trichoderma virens	59.92	0.00e+00	2006.00
IUUC-Tae-125894	Triticum aestivum	37.45	7.00e-82	298.00
IUUC-Tur-126632	Triticum urartu	38.05	5.00e-83	301.00
IUUC-Tme-127087	Tuber melanosporum	55.26	0.00e+00	1559.00
IUUC-Tbe-128040	Tupaia belangeri	39.41	2.00e-88	319.00
IUUC-Ttr-129242	Tursiops truncatus	32.95	3.00e-100	358.00
IUUC-Uma-129590	Ustilago maydis	33.47	0.00e+00	699.00
IUUC-Vda-129733	Verticillium dahliae	63.24	0.00e+00	2209.00
IUUC-Vpa-130433	Vicugna pacos	34.75	5.00e-92	330.00
IUUC-Vvi-131071	Vitis vinifera	40.36	3.00e-69	255.00
IUUC-Xtr-132324	Xenopus tropicalis	29.22	4.00e-96	345.00
IUUC-Xma-133571	Xiphophorus maculatus	32.57	4.00e-103	368.00
IUUC-Zma-135829	Zea mays	35.91	2.00e-82	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence