iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112552

Ensembl Protein ID

PGSC0003DMT400064857

UniProt Accession

M1CD08; M1CD08_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400025183	PGSC0003DMT400064857	PGSC0003DMT400064857

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-06	29.1	23	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPn 58
           +f C I +el +dP v+ +G+ y   ++ +wl+   +  +cP++++ ++e++lvP 
   Q: 23   DFECNICFELAQDPIVTLCGHLYCWPCLYEWLQVHSHshECPICKALIEEHKLVPI 78
           699*****************************54444458***************7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MDYTTGESLD ALHSADMNSD SGDFECNICF ELAQDPIVTL CGHLYCWPCL YEWLQVHSHS 60
HECPICKALI EEHKLVPIYG RGKASSDPRS RLRPGINIPK RPVGQRPQTA PAVDLDYLRH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCCACGTA GTTGAGTTGA AAAAGAGCAT AGCGATTAAC AAAACTAGCT AAGCAGACTG 60
TATAGTAAAA TTAGGCAGCT ACCGACAATA GAGCTGAGAA AATCACTTGA TGGTATTAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102594316

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001417	Ailuropoda melanoleuca	52.94	3.00e-25	106.00
IUUC-Aca-004254	Anolis carolinensis	50.00	9.00e-24	101.00
IUUC-Cel-018228	Caenorhabditis elegans	45.05	2.00e-27	114.00
IUUC-Cfa-020079	Canis familiaris	52.94	2.00e-25	107.00
IUUC-Cre-022829	Chlamydomonas reinhardtii	52.13	5.00e-26	107.00
IUUC-Csv-026364	Ciona savignyi	38.18	4.00e-08	51.60
IUUC-Dor-030170	Dipodomys ordii	52.94	8.00e-25	105.00
IUUC-Fca-036326	Felis catus	52.94	2.00e-25	107.00
IUUC-Gmo-039369	Gadus morhua	47.22	2.00e-21	93.60
IUUC-Ggo-045474	Gorilla gorilla	52.94	3.00e-25	107.00
IUUC-Itr-048037	Ictidomys tridecemlineatus	49.46	7.00e-26	108.00
IUUC-Mdo-062437	Monodelphis domestica	50.54	1.00e-26	111.00
IUUC-Mlu-067689	Myotis lucifugus	46.32	2.00e-25	107.00
IUUC-Ont-071950	Oreochromis niloticus	52.17	1.00e-21	94.70
IUUC-Oar-090284	Ovis aries	51.76	1.00e-24	104.00
IUUC-Ptr-090919	Pan troglodytes	52.94	3.00e-25	106.00
IUUC-Sly-110917	Solanum lycopersicum	96.38	3.00e-127	446.00
IUUC-Tsy-119615	Tarsius syrichta	46.08	5.00e-26	108.00
IUUC-Tni-120909	Tetraodon nigroviridis	48.10	3.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence