iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112842

Ensembl Protein ID

PGSC0003DMT400084297

UniProt Accession

M1D7Q6; M1D7Q6_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400033921	PGSC0003DMT400084297	PGSC0003DMT400084297

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.60e-08	33.2	140	189
E3 activity/RING/RING	9.20e-09	36.9	143	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteed 54
            ++C+  ++l++ Pv++p+G+ +  ++ +kw+ + ++tc  +r+p+  ++
   Q: 140  SLNCSMCMQLPERPVTTPCGHNFCLKCFQKWVGQRKSTCANCRTPIPAKM 189
           679*****************************99999******9997655 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+ C++ +++ p+++pCgH f+++C+qkw     + +++ +C  Cr
   Q: 143  CSMCMQLPER-PVTTPCGHNFCLKCFQKW-----VGQRKSTCANCR 182
           99********.9*****************.....677777788776 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAHDSDLPCD GDGVCMACKV KPSENESLTC KTCATPWHVS CLSAPPDSMG DAVNWECPDC 60
SMPPAADVVP VKQNAAASSS SGGRGDLIAA IRVIESDSTL TEQEKAQKRQ DLMSGNSKDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCCAATCGT CTCTTCTCTT TCTTAACGCC CTCTCTCTCT TTCTCTCTCT TCCTTCTCAC 60
TTTCTCACTC TACTTTGCTT TCTCCGATGG CGCACGATAG CGATCTCCCA TGTGACGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015947--PUA-like_domain
IPR003105--SRA_YDG
IPR019786--Zinc_finger_PHD-type_CS
IPR027370--Znf-RING_LisH
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51015--YDG
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02182--SAD_SRA
PF13445--zf-RING_UBOX

SMART

SM00249--PHD
SM00184--RING
SM00466--SRA

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

KEGG

sot:102578387

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000242	Aegilops tauschii	69.36	1.00e-163	568.00
IUUC-Aml-001401	Ailuropoda melanoleuca	41.70	2.00e-39	156.00
IUUC-Atr-002603	Amborella trichopoda	67.28	0.00e+00	838.00
IUUC-Apl-003819	Anas platyrhynchos	34.90	8.00e-51	194.00
IUUC-Aca-005287	Anolis carolinensis	45.07	4.00e-44	172.00
IUUC-Aly-006276	Arabidopsis lyrata	65.12	0.00e+00	823.00
IUUC-Ath-006667	Arabidopsis thaliana	64.42	0.00e+00	791.00
IUUC-Ame-011845	Astyanax mexicanus	48.06	4.00e-44	172.00
IUUC-Bgr-012267	Blumeria graminis	34.21	2.00e-08	53.50
IUUC-Bta-012600	Bos taurus	34.07	7.00e-51	194.00
IUUC-Bci-013703	Botrytis cinerea	31.13	5.00e-10	57.80
IUUC-Bdi-014586	Brachypodium distachyon	65.43	0.00e+00	756.00
IUUC-Bol-015519	Brassica oleracea	67.17	0.00e+00	832.00
IUUC-Bra-017110	Brassica rapa	66.89	0.00e+00	830.00
IUUC-Cja-018864	Callithrix jacchus	47.44	1.00e-45	177.00
IUUC-Cfa-021096	Canis familiaris	31.68	9.00e-45	174.00
IUUC-Cpo-022125	Cavia porcellus	34.95	2.00e-54	206.00
IUUC-Cre-022645	Chlamydomonas reinhardtii	34.26	2.00e-80	292.00
IUUC-Csa-023951	Chlorocebus sabaeus	30.51	4.00e-43	168.00
IUUC-Cho-024857	Choloepus hoffmanni	40.80	3.00e-21	95.90
IUUC-Cin-025454	Ciona intestinalis	34.38	2.00e-45	176.00
IUUC-Cgl-026498	Colletotrichum gloeosporioides	33.86	1.00e-10	60.10
IUUC-Cne-026942	Cryptococcus neoformans	48.99	1.00e-28	117.00
IUUC-Dre-028200	Danio rerio	34.08	3.00e-50	192.00
IUUC-Dno-029950	Dasypus novemcinctus	31.60	6.00e-46	178.00
IUUC-Dor-031084	Dipodomys ordii	34.31	5.00e-51	194.00
IUUC-Dse-031392	Dothistroma septosporum	37.17	3.00e-10	57.40
IUUC-Ete-032375	Echinops telfairi	23.96	2.00e-09	56.60
IUUC-Eca-033266	Equus caballus	46.95	1.00e-43	170.00
IUUC-Eeu-035077	Erinaceus europaeus	47.98	6.00e-36	143.00
IUUC-Fca-035570	Felis catus	41.70	2.00e-39	156.00
IUUC-Fal-037550	Ficedula albicollis	34.99	3.00e-50	192.00
IUUC-Gmo-038826	Gadus morhua	33.16	5.00e-50	191.00
IUUC-Ggr-039874	Gaeumannomyces graminis	28.76	1.00e-08	53.10
IUUC-Gga-040484	Gallus gallus	35.41	7.00e-51	194.00
IUUC-Gac-041859	Gasterosteus aculeatus	34.09	2.00e-52	199.00
IUUC-Gma-044194	Glycine max	65.54	0.00e+00	851.00
IUUC-Ggo-045414	Gorilla gorilla	47.44	2.00e-45	176.00
IUUC-Hsa-046236	Homo sapiens	47.44	2.00e-45	176.00
IUUC-Hvu-047471	Hordeum vulgare	69.75	0.00e+00	651.00
IUUC-Itr-047867	Ictidomys tridecemlineatus	47.91	9.00e-45	174.00
IUUC-Lch-050162	Latimeria chalumnae	47.09	2.00e-43	169.00
IUUC-Lpe-050756	Leersia perrieri	62.67	0.00e+00	790.00
IUUC-Loc-051806	Lepisosteus oculatus	34.14	3.00e-49	189.00
IUUC-Lma-052953	Leptosphaeria maculans	35.51	3.00e-10	59.30
IUUC-Laf-053529	Loxodonta africana	41.70	4.00e-39	155.00
IUUC-Mcc-055815	Macaca mulatta	30.51	4.00e-43	168.00
IUUC-Meu-056189	Macropus eugenii	49.18	1.00e-26	113.00
IUUC-Mpo-057318	Magnaporthe poae	29.61	3.00e-07	48.90
IUUC-Mtr-058805	Medicago truncatula	68.07	0.00e+00	831.00
IUUC-Mla-058836	Melampsora laricipopulina	50.00	2.00e-40	159.00
IUUC-Mga-059759	Meleagris gallopavo	34.96	1.00e-48	186.00
IUUC-Mvi-060378	Microbotryum violaceum	54.49	5.00e-32	130.00
IUUC-Mmr-060646	Microcebus murinus	32.27	5.00e-43	168.00
IUUC-Mdo-062659	Monodelphis domestica	44.86	1.00e-44	174.00
IUUC-Mmu-063738	Mus musculus	48.60	3.00e-45	176.00
IUUC-Mac-064697	Musa acuminata	64.86	0.00e+00	828.00
IUUC-Mpu-065830	Mustela putorius furo	41.59	3.00e-39	154.00
IUUC-Mlu-067256	Myotis lucifugus	33.16	8.00e-44	171.00
IUUC-Ncr-068857	Neurospora crassa	26.36	3.00e-07	50.10
IUUC-Nle-069901	Nomascus leucogenys	32.21	6.00e-43	167.00
IUUC-Opr-070813	Ochotona princeps	51.67	2.00e-11	63.20
IUUC-Ont-072292	Oreochromis niloticus	48.06	2.00e-43	169.00
IUUC-Oan-073109	Ornithorhynchus anatinus	45.33	8.00e-44	170.00
IUUC-Ocu-074748	Oryctolagus cuniculus	33.41	2.00e-44	172.00
IUUC-Oba-075108	Oryza barthii	63.64	0.00e+00	807.00
IUUC-Obr-076572	Oryza brachyantha	63.62	0.00e+00	765.00
IUUC-Ogl-077177	Oryza glaberrima	64.10	0.00e+00	801.00
IUUC-Ogu-078298	Oryza glumaepatula	64.26	0.00e+00	801.00
IUUC-Oin-079911	Oryza indica	63.79	0.00e+00	807.00
IUUC-Olo-080527	Oryza longistaminata	56.27	0.00e+00	704.00
IUUC-Ome-081137	Oryza meridionalis	62.02	0.00e+00	758.00
IUUC-Oni-082620	Oryza nivara	63.79	0.00e+00	807.00
IUUC-Opu-083974	Oryza punctata	63.01	0.00e+00	790.00
IUUC-Oru-084976	Oryza rufipogon	64.26	0.00e+00	802.00
IUUC-Osa-085339	Oryza sativa	64.26	0.00e+00	802.00
IUUC-Ola-086706	Oryzias latipes	43.23	3.00e-44	172.00
IUUC-Oga-088218	Otolemur garnettii	31.03	4.00e-45	175.00
IUUC-Oar-090189	Ovis aries	42.15	2.00e-39	156.00
IUUC-Ptr-090559	Pan troglodytes	47.44	2.00e-45	176.00
IUUC-Pan-092855	Papio anubis	46.98	9.00e-45	174.00
IUUC-Psi-093033	Pelodiscus sinensis	45.79	6.00e-45	174.00
IUUC-Pma-094339	Petromyzon marinus	47.66	6.00e-45	174.00
IUUC-Pno-095043	Phaeosphaeria nodorum	37.14	4.00e-06	44.30
IUUC-Ppa-095940	Physcomitrella patens	59.21	0.00e+00	766.00
IUUC-Pfo-096243	Poecilia formosa	47.57	6.00e-43	167.00
IUUC-Pab-098243	Pongo abelii	47.44	2.00e-45	176.00
IUUC-Pop-099561	Populus trichocarpa	65.83	0.00e+00	891.00
IUUC-Pca-100531	Procavia capensis	41.70	3.00e-39	155.00
IUUC-Ppe-101961	Prunus persica	68.48	0.00e+00	849.00
IUUC-Pva-102266	Pteropus vampyrus	34.48	2.00e-44	173.00
IUUC-Pgr-103644	Puccinia graminis	43.98	4.00e-38	151.00
IUUC-Ptt-103867	Puccinia triticina	52.20	9.00e-42	163.00
IUUC-Pyt-104740	Pyrenophora triticirepentis	33.60	1.00e-12	67.00
IUUC-Rno-105345	Rattus norvegicus	35.47	1.00e-51	197.00
IUUC-Sce-106362	Saccharomyces cerevisiae	24.75	3.00e-08	51.60
IUUC-Sha-106687	Sarcophilus harrisii	33.82	4.00e-51	195.00
IUUC-Ssl-108645	Sclerotinia sclerotiorum	30.97	5.00e-06	45.80
IUUC-Smo-109319	Selaginella moellendorffii	53.88	0.00e+00	635.00
IUUC-Sit-110588	Setaria italica	63.21	0.00e+00	773.00
IUUC-Sly-111415	Solanum lycopersicum	94.18	0.00e+00	1300.00
IUUC-Sar-113546	Sorex araneus	44.78	6.00e-22	98.20
IUUC-Sbi-114726	Sorghum bicolor	62.58	0.00e+00	769.00
IUUC-Sre-115182	Sporisorium reilianum	45.71	1.00e-32	132.00
IUUC-Ssc-116081	Sus scrofa	46.51	7.00e-44	171.00
IUUC-Tgu-116538	Taeniopygia guttata	47.91	3.00e-45	175.00
IUUC-Tru-117599	Takifugu rubripes	48.06	2.00e-44	173.00
IUUC-Tsy-119249	Tarsius syrichta	32.98	3.00e-44	172.00
IUUC-Tni-119843	Tetraodon nigroviridis	35.85	1.00e-52	200.00
IUUC-Tca-121785	Theobroma cacao	70.10	0.00e+00	908.00
IUUC-Tae-125473	Triticum aestivum	62.73	0.00e+00	711.00
IUUC-Tme-127149	Tuber melanosporum	46.71	2.00e-23	102.00
IUUC-Tbe-127823	Tupaia belangeri	29.25	2.00e-38	153.00
IUUC-Ttr-128522	Tursiops truncatus	46.05	7.00e-42	164.00
IUUC-Vda-129727	Verticillium dahliae	36.09	4.00e-12	64.30
IUUC-Vpa-130073	Vicugna pacos	41.70	2.00e-39	156.00
IUUC-Vvi-131413	Vitis vinifera	69.23	0.00e+00	940.00
IUUC-Xtr-132432	Xenopus tropicalis	33.17	7.00e-47	181.00
IUUC-Xma-133516	Xiphophorus maculatus	34.09	8.00e-49	187.00
IUUC-Zma-135894	Zea mays	66.11	0.00e+00	783.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence