iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117330

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01052950

Gene Name

UBR4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000016758.1	ENSTGUT00000017543.1	ENSTGUP00000017163.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	90.22	0.00e+00	5593.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

SESEILHHDK QYEPFYSSFV ALSTHYITTV CGLIPRNQLQ SVAAACKVLI EFSLLRLENP 60
DEACAVSQKH LILLIKGLCT GCSRLDRTEI ITFTAMMKSA KLPQTVKTLS DVEDQKELAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGAATCTG AGATCCTGCA CCACGACAAG CAGTACGAGC CTTTTTACTC CTCCTTCGTT 60
GCACTTTCCA CACACTACAT CACTACTGTG TGTGGTCTCA GTAAGTGTTC CTTTGCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF13764--E3_UbLigase_R4
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0005813--C:centrosome
GO:0005829--C:cytosol
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	31.61	0.00e+00	957.00
IUUC-Aml-001346	Ailuropoda melanoleuca	89.78	0.00e+00	5554.00
IUUC-Atr-002587	Amborella trichopoda	35.05	5.00e-146	513.00
IUUC-Apl-003678	Anas platyrhynchos	95.35	0.00e+00	9412.00
IUUC-Aca-004517	Anolis carolinensis	95.19	0.00e+00	944.00
IUUC-Aly-006117	Arabidopsis lyrata	31.34	0.00e+00	897.00
IUUC-Ath-007289	Arabidopsis thaliana	31.26	0.00e+00	894.00
IUUC-Ame-011965	Astyanax mexicanus	82.29	0.00e+00	4701.00
IUUC-Bta-012498	Bos taurus	89.22	0.00e+00	8818.00
IUUC-Bdi-014555	Brachypodium distachyon	31.93	0.00e+00	969.00
IUUC-Bol-015522	Brassica oleracea	31.18	0.00e+00	911.00
IUUC-Bra-017090	Brassica rapa	31.01	0.00e+00	849.00
IUUC-Cel-018504	Caenorhabditis elegans	25.33	7.00e-159	555.00
IUUC-Cja-018983	Callithrix jacchus	89.89	0.00e+00	5535.00
IUUC-Cfa-020612	Canis familiaris	89.74	0.00e+00	5565.00
IUUC-Cpo-021700	Cavia porcellus	90.32	0.00e+00	8944.00
IUUC-Csa-023771	Chlorocebus sabaeus	89.95	0.00e+00	5535.00
IUUC-Cho-024474	Choloepus hoffmanni	82.38	0.00e+00	3477.00
IUUC-Cin-025247	Ciona intestinalis	56.24	0.00e+00	986.00
IUUC-Csv-026255	Ciona savignyi	56.53	0.00e+00	999.00
IUUC-Dre-028796	Danio rerio	83.64	0.00e+00	5055.00
IUUC-Dno-030056	Dasypus novemcinctus	89.89	0.00e+00	5535.00
IUUC-Dor-030711	Dipodomys ordii	89.32	0.00e+00	3313.00
IUUC-Dme-032113	Drosophila melanogaster	47.17	0.00e+00	1670.00
IUUC-Ete-032334	Echinops telfairi	90.70	0.00e+00	3301.00
IUUC-Eca-033327	Equus caballus	89.77	0.00e+00	5585.00
IUUC-Eeu-034698	Erinaceus europaeus	83.62	0.00e+00	1187.00
IUUC-Fca-035430	Felis catus	89.47	0.00e+00	5549.00
IUUC-Fal-037566	Ficedula albicollis	96.36	0.00e+00	9469.00
IUUC-Gmo-038674	Gadus morhua	82.94	0.00e+00	7933.00
IUUC-Ggr-039732	Gaeumannomyces graminis	46.43	1.40e-01	30.40
IUUC-Gga-040641	Gallus gallus	95.41	0.00e+00	9383.00
IUUC-Gac-041870	Gasterosteus aculeatus	83.15	0.00e+00	8207.00
IUUC-Gma-042722	Glycine max	32.24	0.00e+00	916.00
IUUC-Ggo-045360	Gorilla gorilla	89.86	0.00e+00	5528.00
IUUC-Hsa-046955	Homo sapiens	89.83	0.00e+00	5527.00
IUUC-Hvu-047255	Hordeum vulgare	31.81	0.00e+00	955.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	88.63	0.00e+00	3687.00
IUUC-Lch-049893	Latimeria chalumnae	81.59	0.00e+00	5006.00
IUUC-Lpe-050948	Leersia perrieri	31.25	0.00e+00	885.00
IUUC-Loc-052019	Lepisosteus oculatus	83.02	0.00e+00	8068.00
IUUC-Laf-054238	Loxodonta africana	88.71	0.00e+00	5459.00
IUUC-Mcc-054905	Macaca mulatta	89.95	0.00e+00	5534.00
IUUC-Meu-056297	Macropus eugenii	86.19	0.00e+00	4630.00
IUUC-Mtr-058169	Medicago truncatula	31.63	0.00e+00	916.00
IUUC-Mga-059621	Meleagris gallopavo	95.33	0.00e+00	9387.00
IUUC-Mmr-061395	Microcebus murinus	96.77	0.00e+00	2928.00
IUUC-Mdo-063037	Monodelphis domestica	89.69	0.00e+00	4581.00
IUUC-Mmu-063200	Mus musculus	89.09	0.00e+00	5450.00
IUUC-Mac-065267	Musa acuminata	31.09	0.00e+00	867.00
IUUC-Mpu-066639	Mustela putorius furo	89.79	0.00e+00	5555.00
IUUC-Mlu-067172	Myotis lucifugus	90.47	0.00e+00	8933.00
IUUC-Nle-069162	Nomascus leucogenys	89.34	0.00e+00	4437.00
IUUC-Opr-070567	Ochotona princeps	84.50	0.00e+00	1790.00
IUUC-Ont-072364	Oreochromis niloticus	83.61	0.00e+00	8111.00
IUUC-Oan-072804	Ornithorhynchus anatinus	84.45	0.00e+00	2005.00
IUUC-Ocu-074637	Oryctolagus cuniculus	89.58	0.00e+00	5519.00
IUUC-Oba-075215	Oryza barthii	33.49	0.00e+00	817.00
IUUC-Obr-076704	Oryza brachyantha	31.80	0.00e+00	933.00
IUUC-Ogl-077593	Oryza glaberrima	35.44	0.00e+00	645.00
IUUC-Ogu-078732	Oryza glumaepatula	33.67	0.00e+00	822.00
IUUC-Oin-079805	Oryza indica	32.62	0.00e+00	729.00
IUUC-Olo-080261	Oryza longistaminata	33.53	0.00e+00	823.00
IUUC-Ome-081392	Oryza meridionalis	33.74	0.00e+00	861.00
IUUC-Oni-082086	Oryza nivara	33.79	0.00e+00	823.00
IUUC-Opu-083535	Oryza punctata	33.79	0.00e+00	827.00
IUUC-Oru-084735	Oryza rufipogon	33.85	0.00e+00	824.00
IUUC-Ola-086799	Oryzias latipes	82.92	0.00e+00	8104.00
IUUC-Olu-087777	Ostreococcus lucimarinus	27.07	2.00e-82	301.00
IUUC-Oga-088126	Otolemur garnettii	85.82	0.00e+00	1376.00
IUUC-Oar-090428	Ovis aries	88.14	0.00e+00	8657.00
IUUC-Ptr-091407	Pan troglodytes	89.86	0.00e+00	5531.00
IUUC-Pan-091777	Papio anubis	90.18	0.00e+00	8911.00
IUUC-Psi-093587	Pelodiscus sinensis	93.17	0.00e+00	9267.00
IUUC-Ppa-095781	Physcomitrella patens	31.89	0.00e+00	993.00
IUUC-Pfo-097449	Poecilia formosa	81.61	0.00e+00	5005.00
IUUC-Pab-098450	Pongo abelii	88.06	0.00e+00	5402.00
IUUC-Pop-100041	Populus trichocarpa	31.64	0.00e+00	886.00
IUUC-Pca-100663	Procavia capensis	84.83	0.00e+00	2661.00
IUUC-Ppe-101386	Prunus persica	34.16	0.00e+00	810.00
IUUC-Pva-102701	Pteropus vampyrus	89.45	0.00e+00	7061.00
IUUC-Rno-105367	Rattus norvegicus	89.80	0.00e+00	8779.00
IUUC-Sha-107490	Sarcophilus harrisii	90.08	0.00e+00	5636.00
IUUC-Smo-109103	Selaginella moellendorffii	35.28	0.00e+00	888.00
IUUC-Sit-110670	Setaria italica	31.54	0.00e+00	952.00
IUUC-Sly-110952	Solanum lycopersicum	31.79	0.00e+00	879.00
IUUC-Stu-112624	Solanum tuberosum	34.71	2.00e-127	450.00
IUUC-Sar-113180	Sorex araneus	82.76	0.00e+00	3915.00
IUUC-Sbi-114596	Sorghum bicolor	31.52	0.00e+00	921.00
IUUC-Ssc-115377	Sus scrofa	96.57	0.00e+00	2923.00
IUUC-Tru-117635	Takifugu rubripes	80.61	0.00e+00	4972.00
IUUC-Tsy-119551	Tarsius syrichta	88.01	0.00e+00	3927.00
IUUC-Tni-119727	Tetraodon nigroviridis	80.73	0.00e+00	4960.00
IUUC-Tca-121017	Theobroma cacao	34.07	0.00e+00	852.00
IUUC-Tae-122892	Triticum aestivum	36.71	2.00e-25	109.00
IUUC-Tur-126292	Triticum urartu	32.62	0.00e+00	955.00
IUUC-Ttr-128332	Tursiops truncatus	89.33	0.00e+00	4670.00
IUUC-Vpa-130615	Vicugna pacos	86.90	0.00e+00	2337.00
IUUC-Vvi-131435	Vitis vinifera	33.99	0.00e+00	805.00
IUUC-Xtr-132130	Xenopus tropicalis	88.83	0.00e+00	2106.00
IUUC-Xma-133859	Xiphophorus maculatus	81.65	0.00e+00	4994.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence