iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-106769

Ensembl Protein ID

ENSSHAP00000005524.1

UniProt Accession

G3VQR9; G3VQR9_SARHA

Genbank Protein ID

ENSSHAP00000005524

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01232457

Gene Name

KDM5C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000004827.1	ENSSHAT00000005578.1	ENSSHAP00000005524.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.00e-09	37.6	276	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vC +C +g+ed+ +l+ C+ C++++H  Cl ++  +e p+   w CpkC 
   Q: 276  VCRMCSRGDEDD-KLLLCDGCDDNYHIFCLLPP-LPEIPKGI-WRCPKCV 322
           8*********88.6*******************.*******7.******6 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

DWQPPFAVEV DNFRFTPRIQ RLNELEAQTR VKLNYLDQIA KFWEIQGSSL KIPNVERRIL 60
DLYSLSKIVV EEGGYEAISK DRRWARVAQR LNYPAGKNIG SLLRSHYERI VYPYEMYQSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACTGGCAGC CTCCCTTTGC TGTGGAAGTG GACAATTTCA GGTTCACCCC CCGGATCCAG 60
AGGCTGAATG AATTGGAGGT AAAAGGGAGG GGGCGGGAAC TGGGGGGGGG GGCAGGGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	31.35	7.00e-97	349.00
IUUC-Aml-001327	Ailuropoda melanoleuca	88.21	0.00e+00	2105.00
IUUC-Aca-004712	Anolis carolinensis	81.44	0.00e+00	1890.00
IUUC-Afl-008625	Aspergillus flavus	30.72	2.00e-120	427.00
IUUC-Aor-010155	Aspergillus oryzae	30.72	2.00e-120	427.00
IUUC-Bta-013099	Bos taurus	88.29	0.00e+00	2096.00
IUUC-Cja-018723	Callithrix jacchus	86.59	0.00e+00	2065.00
IUUC-Cfa-020954	Canis familiaris	88.29	0.00e+00	2104.00
IUUC-Cpo-021718	Cavia porcellus	94.35	0.00e+00	1218.00
IUUC-Csa-023946	Chlorocebus sabaeus	88.21	0.00e+00	2125.00
IUUC-Csv-026185	Ciona savignyi	44.93	0.00e+00	1005.00
IUUC-Cne-026851	Cryptococcus neoformans	33.10	7.00e-106	379.00
IUUC-Dre-028238	Danio rerio	64.83	0.00e+00	1718.00
IUUC-Dno-029435	Dasypus novemcinctus	88.45	0.00e+00	2103.00
IUUC-Dor-030226	Dipodomys ordii	82.00	0.00e+00	1621.00
IUUC-Dme-032021	Drosophila melanogaster	46.12	0.00e+00	1026.00
IUUC-Eca-033834	Equus caballus	88.29	0.00e+00	2117.00
IUUC-Eeu-034692	Erinaceus europaeus	86.91	0.00e+00	1592.00
IUUC-Fca-035766	Felis catus	84.52	0.00e+00	1984.00
IUUC-Gmo-039140	Gadus morhua	69.30	0.00e+00	1578.00
IUUC-Gac-041825	Gasterosteus aculeatus	66.12	0.00e+00	1663.00
IUUC-Ggo-045492	Gorilla gorilla	88.13	0.00e+00	2125.00
IUUC-Hsa-046737	Homo sapiens	88.13	0.00e+00	2112.00
IUUC-Itr-048348	Ictidomys tridecemlineatus	88.13	0.00e+00	2144.00
IUUC-Lch-050517	Latimeria chalumnae	76.37	0.00e+00	1917.00
IUUC-Laf-054098	Loxodonta africana	92.90	0.00e+00	1463.00
IUUC-Mcc-055740	Macaca mulatta	88.37	0.00e+00	2130.00
IUUC-Meu-056643	Macropus eugenii	94.62	0.00e+00	2311.00
IUUC-Mga-059358	Meleagris gallopavo	51.81	0.00e+00	1221.00
IUUC-Mmr-061032	Microcebus murinus	88.21	0.00e+00	2111.00
IUUC-Mdo-062754	Monodelphis domestica	90.31	0.00e+00	2139.00
IUUC-Mmu-063943	Mus musculus	87.82	0.00e+00	2119.00
IUUC-Mpu-066800	Mustela putorius furo	88.13	0.00e+00	2100.00
IUUC-Mlu-067109	Myotis lucifugus	88.05	0.00e+00	2103.00
IUUC-Nfi-068430	Neosartorya fischeri	31.51	5.00e-129	456.00
IUUC-Nle-069569	Nomascus leucogenys	88.21	0.00e+00	2124.00
IUUC-Ont-072274	Oreochromis niloticus	68.08	0.00e+00	1719.00
IUUC-Oan-073160	Ornithorhynchus anatinus	89.08	0.00e+00	2172.00
IUUC-Ocu-074440	Oryctolagus cuniculus	88.37	0.00e+00	2107.00
IUUC-Oin-079273	Oryza indica	34.69	1.00e-13	69.30
IUUC-Ola-087059	Oryzias latipes	67.92	0.00e+00	1694.00
IUUC-Oga-088191	Otolemur garnettii	88.37	0.00e+00	2116.00
IUUC-Oar-090027	Ovis aries	88.37	0.00e+00	2095.00
IUUC-Ptr-091415	Pan troglodytes	82.20	0.00e+00	1965.00
IUUC-Pan-091829	Papio anubis	88.37	0.00e+00	2128.00
IUUC-Pma-094137	Petromyzon marinus	53.12	0.00e+00	1268.00
IUUC-Pfo-096645	Poecilia formosa	63.18	0.00e+00	1654.00
IUUC-Pab-097582	Pongo abelii	85.69	0.00e+00	2037.00
IUUC-Pca-100446	Procavia capensis	85.60	0.00e+00	2032.00
IUUC-Pva-102553	Pteropus vampyrus	87.27	0.00e+00	1437.00
IUUC-Pgr-103434	Puccinia graminis	34.13	2.00e-20	93.60
IUUC-Rno-105359	Rattus norvegicus	78.41	0.00e+00	1982.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	30.36	2.00e-110	394.00
IUUC-Sre-115161	Sporisorium reilianum	31.03	3.00e-121	430.00
IUUC-Ssc-116354	Sus scrofa	88.53	0.00e+00	2127.00
IUUC-Tru-117667	Takifugu rubripes	64.47	0.00e+00	1539.00
IUUC-Tni-119920	Tetraodon nigroviridis	67.06	0.00e+00	1670.00
IUUC-Tae-125894	Triticum aestivum	31.93	2.00e-98	354.00
IUUC-Tur-126632	Triticum urartu	31.61	6.00e-97	349.00
IUUC-Tbe-128040	Tupaia belangeri	91.46	0.00e+00	1011.00
IUUC-Ttr-128979	Tursiops truncatus	88.21	0.00e+00	2115.00
IUUC-Uma-129590	Ustilago maydis	29.55	4.00e-118	420.00
IUUC-Vpa-130433	Vicugna pacos	90.02	0.00e+00	1654.00
IUUC-Vvi-131071	Vitis vinifera	31.77	3.00e-82	300.00
IUUC-Xtr-132324	Xenopus tropicalis	72.33	0.00e+00	1760.00
IUUC-Xma-134315	Xiphophorus maculatus	67.53	0.00e+00	1696.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence