iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	UniProt	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/Other	E3 adaptor/Cullin RING/Other	18704118

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Substrate targeting component of a cullin-RING-based E3 ubiquitin-protein ligase complex RTT101(MMS1-CRT10). RTT101(MMS1-CRT10) may regulate nucleotide synthesis through transcriptional regulation of RNR genes encoding ribonucleotide reductases.

Protein Sequence
(Fasta)

MPPQIPNEND DLFTRWLKSR AIIQRAVSTR ECFDSEVFLA SGGWNITNEI ITLKKYYQLK 60
WPNSSCNSFH PKTVEFIKER LHNLEEHDSS WKIPNPAYSF KKAFLEDTKS AFSNLEPVWG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCCCTC AGATTCCCAA TGAAAATGAT GATCTCTTTA CAAGGTGGCT TAAGTCTCGG 60
GCCATCATAC AAAGGGCAGT ATCGACAAGA GAGTGCTTTG ACTCAGAAGT ATTTCTGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR014839--Crt10
IPR015943--WD40/YVTN_repeat-like_dom

Pfam

PF08728--CRT10

Gene Ontology

GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

KEGG

sce:YOL063C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001065	Aegilops tauschii	40.00	5.30e-02	30.80
IUUC-Apl-003913	Anas platyrhynchos	34.33	2.10e-02	31.20
IUUC-Ath-006769	Arabidopsis thaliana	27.59	1.20e-01	30.80
IUUC-Ago-007739	Ashbya gossypii	39.34	6.00e-34	137.00
IUUC-Acl-008125	Aspergillus clavatus	28.28	3.00e-03	35.40
IUUC-Afl-008543	Aspergillus flavus	30.70	9.00e-05	38.90
IUUC-Afu-008888	Aspergillus fumigatus	26.53	3.00e-03	35.40
IUUC-Ani-009282	Aspergillus nidulans	27.27	1.00e-02	33.50
IUUC-Ang-009623	Aspergillus niger	32.73	4.00e-03	35.00
IUUC-Ate-010255	Aspergillus terreus	30.91	3.00e-03	35.40
IUUC-Bol-015725	Brassica oleracea	29.41	2.00e-03	33.90
IUUC-Dre-028397	Danio rerio	29.23	2.00e-01	29.30
IUUC-Dor-031009	Dipodomys ordii	28.87	4.70e-02	31.20
IUUC-Dme-031994	Drosophila melanogaster	28.40	3.60e-02	31.20
IUUC-Eeu-034891	Erinaceus europaeus	26.06	8.20e-02	33.10
IUUC-Ggr-039799	Gaeumannomyces graminis	40.82	9.00e-03	33.90
IUUC-Gac-041380	Gasterosteus aculeatus	30.43	2.60e-02	32.00
IUUC-Gma-042653	Glycine max	45.95	1.00e-03	35.80
IUUC-Hvu-047369	Hordeum vulgare	46.67	9.00e-03	32.00
IUUC-Kpa-049191	Komagataella pastoris	24.67	1.00e-06	45.80
IUUC-Mor-056987	Magnaporthe oryzae	31.82	2.00e-03	35.40
IUUC-Mpo-057444	Magnaporthe poae	24.24	7.80e-02	32.70
IUUC-Mga-059848	Meleagris gallopavo	40.00	3.50e-02	30.40
IUUC-Mac-065406	Musa acuminata	22.96	1.50e-01	29.30
IUUC-Nfi-068510	Neosartorya fischeri	25.00	1.00e-02	33.50
IUUC-Ola-086661	Oryzias latipes	29.31	9.00e-03	33.90
IUUC-Psi-092961	Pelodiscus sinensis	46.15	7.00e-03	32.70
IUUC-Pno-095062	Phaeosphaeria nodorum	45.45	3.50e-02	30.40
IUUC-Pgr-103387	Puccinia graminis	36.73	2.20e-01	28.90
IUUC-Pyt-104593	Pyrenophora triticirepentis	28.57	6.00e-02	30.40
IUUC-Ssc-116041	Sus scrofa	42.86	1.00e-02	33.10
IUUC-Tgu-117460	Taeniopygia guttata	33.33	2.80e-02	33.50
IUUC-Tru-117906	Takifugu rubripes	26.39	1.20e-01	28.90
IUUC-Ttr-129248	Tursiops truncatus	42.86	6.70e-02	32.30
IUUC-Vvi-131223	Vitis vinifera	27.45	3.70e-02	31.60
IUUC-Xtr-132130	Xenopus tropicalis	46.34	2.20e-01	31.20

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence