iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002052

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01058040

Gene Name

KDM2A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000000531.1	ENSAMET00000000637.1	ENSAMEP00000000617.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.80e-10	39.6	621	680

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek......slveCekCrewfHpaClkls.....veeelpnsekwiCpkCrs 53
            C +Cge +++e+      +l+eC++C+e++Hp+Cl+l       +eelpn+  w+CpkC +
   Q: 621  TCSLCGEVDQNEEtqdfekKLMECCICNEIVHPGCLQLMdgeglLNEELPNC--WECPKCYQ 680
           7*********995555666*********************************..******76 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

EKDLYRREKR GTMRRRYEDD GISDDEIEGK RTFDLEEKLH TNKYNANFVT FMEGKDFNVE 60
YIQRGGLRDP LIFKNSDGLG IKMPDPDFTV NDVKMCVGSR RMVDVMDVNT QKGIEMTMAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAAAGATC TTTAGGGGCA CCTGGGTGGC TCAGTCGTTG GGCGTCTGCC TTCAGCTCAG 60
GGCGTGATCC CGGAGTTCTG GGATTGAGCC CCACATCAGG CTCCTCTGCT GGGAGCCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001810--F-box_dom
IPR003347--JmjC_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp
IPR019786--Zinc_finger_PHD-type_CS
IPR002857--Znf_CXXC
IPR011011--Znf_FYVE_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS51058--ZF_CXXC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00646--F-box
PF02373--JmjC
PF16866--PHD_4
PF02008--zf-CXXC

SMART

SM00558--JmjC
SM00367--LRR_CC

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006303--P:double-strand break repair via nonhomologous end joining
GO:0070544--P:histone H3-K36 demethylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003192	Anas platyrhynchos	74.86	0.00e+00	1741.00
IUUC-Aca-004576	Anolis carolinensis	78.53	0.00e+00	1073.00
IUUC-Ago-007912	Ashbya gossypii	37.46	2.00e-52	199.00
IUUC-Ame-011753	Astyanax mexicanus	58.14	0.00e+00	754.00
IUUC-Cja-019030	Callithrix jacchus	89.53	0.00e+00	1140.00
IUUC-Cfa-020644	Canis familiaris	89.58	0.00e+00	1178.00
IUUC-Csa-023379	Chlorocebus sabaeus	90.50	0.00e+00	1135.00
IUUC-Cho-024541	Choloepus hoffmanni	71.27	0.00e+00	745.00
IUUC-Cin-025140	Ciona intestinalis	61.09	4.00e-107	382.00
IUUC-Csv-025861	Ciona savignyi	58.59	9.00e-121	427.00
IUUC-Cne-026797	Cryptococcus neoformans	38.51	6.00e-59	222.00
IUUC-Dno-029268	Dasypus novemcinctus	90.11	0.00e+00	1136.00
IUUC-Dor-031142	Dipodomys ordii	95.41	0.00e+00	821.00
IUUC-Dme-032039	Drosophila melanogaster	59.59	2.00e-124	440.00
IUUC-Ete-032467	Echinops telfairi	75.32	0.00e+00	936.00
IUUC-Eca-033526	Equus caballus	88.68	0.00e+00	1137.00
IUUC-Eeu-035273	Erinaceus europaeus	75.21	0.00e+00	946.00
IUUC-Fca-035532	Felis catus	90.41	0.00e+00	1133.00
IUUC-Gmo-039539	Gadus morhua	76.64	1.00e-172	600.00
IUUC-Gga-040418	Gallus gallus	78.83	0.00e+00	1048.00
IUUC-Gac-041914	Gasterosteus aculeatus	58.92	0.00e+00	780.00
IUUC-Ggo-045330	Gorilla gorilla	61.12	0.00e+00	1283.00
IUUC-Hsa-046180	Homo sapiens	89.25	0.00e+00	1160.00
IUUC-Itr-048198	Ictidomys tridecemlineatus	95.82	0.00e+00	819.00
IUUC-Laf-053939	Loxodonta africana	89.00	0.00e+00	1155.00
IUUC-Mcc-054600	Macaca mulatta	89.53	0.00e+00	1142.00
IUUC-Meu-056314	Macropus eugenii	92.07	0.00e+00	803.00
IUUC-Mmr-060865	Microcebus murinus	89.39	0.00e+00	1152.00
IUUC-Mdo-062567	Monodelphis domestica	86.86	0.00e+00	1106.00
IUUC-Mmu-063782	Mus musculus	87.46	0.00e+00	1153.00
IUUC-Mpu-066055	Mustela putorius furo	89.53	0.00e+00	1181.00
IUUC-Mlu-067228	Myotis lucifugus	86.28	0.00e+00	1961.00
IUUC-Nle-069668	Nomascus leucogenys	89.53	0.00e+00	1141.00
IUUC-Opr-070225	Ochotona princeps	86.55	0.00e+00	1132.00
IUUC-Ont-071349	Oreochromis niloticus	75.56	1.00e-170	594.00
IUUC-Oan-073668	Ornithorhynchus anatinus	76.04	0.00e+00	660.00
IUUC-Ocu-074710	Oryctolagus cuniculus	88.97	0.00e+00	1103.00
IUUC-Ola-087410	Oryzias latipes	59.17	0.00e+00	772.00
IUUC-Oga-088644	Otolemur garnettii	89.26	0.00e+00	1077.00
IUUC-Oar-089193	Ovis aries	89.16	0.00e+00	1120.00
IUUC-Ptr-091523	Pan troglodytes	89.25	0.00e+00	1160.00
IUUC-Pan-092415	Papio anubis	89.67	0.00e+00	1143.00
IUUC-Ppa-095609	Physcomitrella patens	37.01	3.00e-58	218.00
IUUC-Pfo-096910	Poecilia formosa	56.65	0.00e+00	751.00
IUUC-Pca-100670	Procavia capensis	88.31	0.00e+00	748.00
IUUC-Pva-102416	Pteropus vampyrus	90.27	0.00e+00	1127.00
IUUC-Pgr-103554	Puccinia graminis	44.67	3.00e-74	272.00
IUUC-Rno-105814	Rattus norvegicus	87.61	0.00e+00	1166.00
IUUC-Sce-106445	Saccharomyces cerevisiae	43.46	5.00e-50	192.00
IUUC-Sha-106693	Sarcophilus harrisii	86.45	0.00e+00	1113.00
IUUC-Spo-108120	Schizosaccharomyces pombe	34.24	4.00e-49	189.00
IUUC-Smo-109024	Selaginella moellendorffii	36.45	3.00e-58	219.00
IUUC-Sar-113568	Sorex araneus	88.44	0.00e+00	1085.00
IUUC-Sre-115112	Sporisorium reilianum	40.94	1.00e-59	224.00
IUUC-Ssc-116337	Sus scrofa	94.99	0.00e+00	817.00
IUUC-Tgu-117298	Taeniopygia guttata	78.64	0.00e+00	1052.00
IUUC-Tru-118423	Takifugu rubripes	73.21	8.00e-176	611.00
IUUC-Tsy-119293	Tarsius syrichta	89.19	0.00e+00	1103.00
IUUC-Tni-120020	Tetraodon nigroviridis	54.66	0.00e+00	761.00
IUUC-Tbe-127450	Tupaia belangeri	76.66	0.00e+00	989.00
IUUC-Uma-129458	Ustilago maydis	37.70	2.00e-60	227.00
IUUC-Vpa-130655	Vicugna pacos	86.39	0.00e+00	1090.00
IUUC-Xtr-131839	Xenopus tropicalis	85.93	8.00e-177	613.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence