iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109265

Ensembl Protein ID

EFJ28714

UniProt Accession

D8RH57; D8RH57_SELML

Genbank Protein ID

EFJ28714.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377579

Gene Name

SELMODRAFT_441186

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_441186	EFJ28714	EFJ28714

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-06	27.0	175	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sdtllvsGsdD.gtikvWDlrtg 33
            + + +l+f  d+ +++++dD g  ++WDl+t 
   Q: 175  RS-IKDLDFsLDGSFLAATDDvGPSRIWDLKTA 206
           44.89999997778888888889999***9986 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MASTSNKARK FGTPLFCAAW ASADSTDASV AHGISYAICG GGGGDSSSGL RNTLVLARYD 60
ADSRELSEPL DTLFTDDDTA CAMAMHPNRK EFICTFPATE RHNGKLRLLR LTGGKNLRLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCTTCGTA GCGATGGCTT CCACGAGCAA CAAGGCGAGG AAATTTGGTA CGCCGCTCTT 60
CTGCGCGGCC TGGGCGAGCG CCGACAGCAC AGATGCATCC GTCGCGCATG GGATCTCGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

smo:SELMODRAFT_441186

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001671	Ailuropoda melanoleuca	25.40	9.00e-12	63.90
IUUC-Aly-005479	Arabidopsis lyrata	38.89	7.00e-49	187.00
IUUC-Ath-007466	Arabidopsis thaliana	38.46	5.00e-48	184.00
IUUC-Bta-012386	Bos taurus	28.00	2.00e-13	69.30
IUUC-Bdi-014110	Brachypodium distachyon	43.21	7.00e-55	207.00
IUUC-Bra-016660	Brassica rapa	38.38	8.00e-51	193.00
IUUC-Cja-018998	Callithrix jacchus	26.42	4.00e-14	71.60
IUUC-Cfa-020666	Canis familiaris	26.67	2.00e-13	69.70
IUUC-Csa-023521	Chlorocebus sabaeus	27.13	9.00e-14	70.50
IUUC-Cin-025431	Ciona intestinalis	28.69	2.00e-13	69.30
IUUC-Dno-028989	Dasypus novemcinctus	26.42	2.00e-13	68.90
IUUC-Ete-032290	Echinops telfairi	26.72	1.00e-11	63.50
IUUC-Eca-033917	Equus caballus	26.83	7.00e-14	70.90
IUUC-Fca-036323	Felis catus	26.42	1.00e-13	69.70
IUUC-Gmo-038693	Gadus morhua	27.08	8.00e-14	70.50
IUUC-Gga-040702	Gallus gallus	25.81	4.00e-15	75.10
IUUC-Gma-043946	Glycine max	34.72	7.00e-48	183.00
IUUC-Ggo-044648	Gorilla gorilla	26.42	8.00e-15	73.90
IUUC-Hsa-046003	Homo sapiens	26.42	9.00e-15	73.90
IUUC-Itr-048613	Ictidomys tridecemlineatus	26.83	9.00e-14	70.50
IUUC-Lch-049473	Latimeria chalumnae	27.90	1.00e-13	70.50
IUUC-Lpe-051586	Leersia perrieri	41.28	4.00e-55	207.00
IUUC-Loc-052177	Lepisosteus oculatus	29.44	4.00e-17	81.60
IUUC-Laf-054366	Loxodonta africana	26.42	8.00e-13	67.40
IUUC-Mcc-055775	Macaca mulatta	27.24	4.00e-15	75.10
IUUC-Mtr-058661	Medicago truncatula	36.54	5.00e-52	197.00
IUUC-Mmr-061126	Microcebus murinus	28.80	1.00e-15	77.00
IUUC-Mdo-062928	Monodelphis domestica	27.46	5.00e-11	61.20
IUUC-Mmu-064083	Mus musculus	28.05	1.00e-15	77.00
IUUC-Mac-064955	Musa acuminata	42.05	1.00e-61	229.00
IUUC-Mlu-067891	Myotis lucifugus	26.42	5.00e-13	68.20
IUUC-Nle-070030	Nomascus leucogenys	26.42	2.00e-14	72.80
IUUC-Opr-070864	Ochotona princeps	26.67	8.00e-13	67.40
IUUC-Ont-072204	Oreochromis niloticus	28.40	3.00e-12	65.50
IUUC-Oan-073643	Ornithorhynchus anatinus	26.29	1.00e-10	59.30
IUUC-Ocu-074217	Oryctolagus cuniculus	28.02	4.00e-13	68.20
IUUC-Oba-075587	Oryza barthii	40.94	3.00e-54	204.00
IUUC-Obr-076826	Oryza brachyantha	41.89	6.00e-58	217.00
IUUC-Ogl-077927	Oryza glaberrima	42.12	4.00e-53	201.00
IUUC-Ogu-078241	Oryza glumaepatula	41.76	9.00e-53	199.00
IUUC-Oin-080217	Oryza indica	41.91	4.00e-53	201.00
IUUC-Olo-081060	Oryza longistaminata	44.54	3.00e-50	191.00
IUUC-Ome-082007	Oryza meridionalis	41.28	1.00e-54	206.00
IUUC-Oni-082827	Oryza nivara	41.91	4.00e-53	201.00
IUUC-Opu-083159	Oryza punctata	40.53	3.00e-54	205.00
IUUC-Oru-085039	Oryza rufipogon	41.91	4.00e-53	201.00
IUUC-Osa-086258	Oryza sativa	41.91	4.00e-53	201.00
IUUC-Ola-087223	Oryzias latipes	28.70	5.00e-16	78.20
IUUC-Oga-088417	Otolemur garnettii	26.72	4.00e-12	65.10
IUUC-Oar-090435	Ovis aries	28.00	2.00e-13	69.30
IUUC-Ptr-090869	Pan troglodytes	26.42	1.00e-08	53.10
IUUC-Pan-092527	Papio anubis	27.13	9.00e-14	70.50
IUUC-Ppa-095614	Physcomitrella patens	43.68	5.00e-72	264.00
IUUC-Pab-097720	Pongo abelii	26.42	7.00e-15	74.30
IUUC-Pop-099618	Populus trichocarpa	37.93	3.00e-56	211.00
IUUC-Ppe-101864	Prunus persica	35.06	3.00e-49	188.00
IUUC-Pva-103192	Pteropus vampyrus	28.00	9.00e-15	73.90
IUUC-Pgr-103489	Puccinia graminis	25.19	2.00e-11	62.80
IUUC-Ptt-103883	Puccinia triticina	27.66	1.00e-12	66.20
IUUC-Rno-106123	Rattus norvegicus	28.05	7.00e-16	77.80
IUUC-Sha-107169	Sarcophilus harrisii	27.13	3.00e-11	62.00
IUUC-Sly-111551	Solanum lycopersicum	37.91	3.00e-52	198.00
IUUC-Stu-112264	Solanum tuberosum	38.51	8.00e-53	200.00
IUUC-Ssc-115282	Sus scrofa	27.56	2.00e-14	72.40
IUUC-Tru-117866	Takifugu rubripes	29.63	7.00e-14	70.90
IUUC-Tca-121083	Theobroma cacao	36.90	2.00e-57	215.00
IUUC-Tae-124218	Triticum aestivum	42.34	2.00e-55	208.00
IUUC-Ttr-128585	Tursiops truncatus	27.11	2.00e-13	69.30
IUUC-Vvi-131024	Vitis vinifera	37.22	2.00e-57	215.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence