iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mlu-067653

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPE02039354

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMLUG00000027843.1	ENSMLUT00000026460.1	ENSMLUP00000022571.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.1	26	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  ++ C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCK-CANDVfqasnplwqsrGSTTVSSGGRFRCPSCR 81
           *******************9887.655555555777799877777899********8 PP

Organism

Myotis lucifugus

Protein Sequence
(Fasta)

MNFAVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCKCA NDVFQASNPL 60
WQSRGSTTVS SGGRFRCPSC RHEVVLDRHG VYGLQRNLLV ENIIDIYKQE SSRRPSHHHT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTCG CAGTGGGTTT CAAGCCGCTG CTAGGGGATG CACACAGCAT GGACAACCTG 60
GAGAAGCAGC TCATCTGCCC CATCTGCCTG GAGATGTTCT CCAAGCCGGT GGTGATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51262--COS
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	78.02	4.00e-92	331.00
IUUC-Aca-005384	Anolis carolinensis	54.01	4.00e-93	335.00
IUUC-Ame-010720	Astyanax mexicanus	55.05	2.00e-90	325.00
IUUC-Bta-013385	Bos taurus	80.43	2.00e-127	449.00
IUUC-Cja-019697	Callithrix jacchus	76.92	5.00e-116	410.00
IUUC-Cfa-020995	Canis familiaris	81.04	7.00e-125	440.00
IUUC-Cpo-021913	Cavia porcellus	82.26	3.00e-138	484.00
IUUC-Csa-023342	Chlorocebus sabaeus	81.96	9.00e-130	456.00
IUUC-Cin-025224	Ciona intestinalis	42.35	4.00e-64	238.00
IUUC-Csv-026374	Ciona savignyi	41.72	1.00e-53	202.00
IUUC-Dre-027562	Danio rerio	57.80	4.00e-105	374.00
IUUC-Dno-029582	Dasypus novemcinctus	81.35	3.00e-127	448.00
IUUC-Dor-031139	Dipodomys ordii	82.57	6.00e-139	486.00
IUUC-Eca-033645	Equus caballus	80.73	1.00e-128	452.00
IUUC-Fca-035865	Felis catus	81.04	2.00e-137	482.00
IUUC-Fal-036978	Ficedula albicollis	67.89	3.00e-123	434.00
IUUC-Gmo-039021	Gadus morhua	52.43	2.00e-82	299.00
IUUC-Gga-040452	Gallus gallus	67.48	5.00e-116	410.00
IUUC-Gac-042165	Gasterosteus aculeatus	52.88	2.00e-90	325.00
IUUC-Ggo-044467	Gorilla gorilla	75.76	2.00e-129	455.00
IUUC-Hsa-046379	Homo sapiens	81.65	6.00e-129	453.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	81.35	1.00e-136	479.00
IUUC-Lch-050029	Latimeria chalumnae	63.80	5.00e-109	387.00
IUUC-Loc-051801	Lepisosteus oculatus	65.54	8.00e-107	379.00
IUUC-Laf-054215	Loxodonta africana	82.26	6.00e-139	486.00
IUUC-Mcc-055027	Macaca mulatta	74.66	5.00e-127	447.00
IUUC-Meu-056412	Macropus eugenii	81.04	5.00e-124	437.00
IUUC-Mga-060112	Meleagris gallopavo	56.21	5.00e-95	342.00
IUUC-Mmr-060920	Microcebus murinus	81.65	3.00e-129	454.00
IUUC-Mdo-062832	Monodelphis domestica	80.12	2.00e-122	432.00
IUUC-Mmu-063707	Mus musculus	81.96	3.00e-129	454.00
IUUC-Mpu-066375	Mustela putorius furo	83.75	1.00e-108	385.00
IUUC-Nle-069020	Nomascus leucogenys	81.96	1.00e-129	456.00
IUUC-Ont-072491	Oreochromis niloticus	52.38	1.00e-85	310.00
IUUC-Oan-073101	Ornithorhynchus anatinus	79.51	6.00e-130	456.00
IUUC-Ocu-074454	Oryctolagus cuniculus	81.04	7.00e-127	446.00
IUUC-Ola-086646	Oryzias latipes	50.32	6.00e-83	301.00
IUUC-Oga-088361	Otolemur garnettii	81.65	2.00e-129	455.00
IUUC-Oar-089950	Ovis aries	75.28	3.00e-93	334.00
IUUC-Ptr-090785	Pan troglodytes	74.38	2.00e-126	445.00
IUUC-Pan-092344	Papio anubis	81.96	1.00e-129	455.00
IUUC-Psi-093856	Pelodiscus sinensis	55.31	1.00e-96	346.00
IUUC-Pfo-096596	Poecilia formosa	50.00	4.00e-86	311.00
IUUC-Pab-098322	Pongo abelii	78.59	2.00e-120	425.00
IUUC-Rno-105134	Rattus norvegicus	81.04	1.00e-136	479.00
IUUC-Sha-106768	Sarcophilus harrisii	80.12	8.00e-136	476.00
IUUC-Tgu-117494	Taeniopygia guttata	65.62	3.00e-112	397.00
IUUC-Tru-118744	Takifugu rubripes	51.76	2.00e-88	318.00
IUUC-Tni-120413	Tetraodon nigroviridis	52.26	3.00e-89	321.00
IUUC-Ttr-129063	Tursiops truncatus	78.15	2.00e-129	454.00
IUUC-Xtr-132207	Xenopus tropicalis	54.35	1.00e-93	337.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence