iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026438

Ensembl Protein ID

ELA37708

UniProt Accession

L2GI62; L2GI62_COLGN

Genbank Protein ID

ELA37708.1

Protein Name

Small nucleolar ribonucleoprotein complex subunit

Genbank Nucleotide ID

KB020351

Gene Name

CGGC5_2944

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_2944	ELA37708	ELA37708

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-06	25.7	302	336

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H ++v+++a   + +++vs + D+++ vWD+r ++
   Q: 302  HRGPVRSMAIdREgRYMVSTGQDCKMAVWDIRMFK 336
           9*********97789***************98665 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MEIDSAETKT ISRNNTHDNG AVQVKQRTAL GPREEREKRE KLERIRRQRE ANKAYGRGKS 60
VNVKNIKDKK LRTNLSRLEN KYRDAANKAK DAEILLENTG GFLEAETELE RTYKVRQDDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGATCG ACAGCGCAGA AACGAAGACG ATATCTCGGA ACAACACACA CGACAATGGC 60
GCCGTCCAGG TGAAGCAGCG TACGGCCCTC GGCCCGCGAG AGGAACGCGA GAAGCGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030529--C:intracellular ribonucleoprotein complex
GO:0019013--C:viral nucleocapsid

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000921	Aegilops tauschii	44.26	4.00e-103	366.00
IUUC-Atr-002528	Amborella trichopoda	43.81	1.00e-101	361.00
IUUC-Aly-005663	Arabidopsis lyrata	42.59	5.00e-99	353.00
IUUC-Ath-007405	Arabidopsis thaliana	42.82	1.00e-99	354.00
IUUC-Ang-009764	Aspergillus niger	66.41	0.00e+00	718.00
IUUC-Ame-011572	Astyanax mexicanus	45.71	2.00e-116	410.00
IUUC-Bdi-014459	Brachypodium distachyon	45.22	8.00e-103	365.00
IUUC-Bol-015169	Brassica oleracea	42.66	8.00e-98	350.00
IUUC-Bra-016837	Brassica rapa	41.36	1.00e-96	345.00
IUUC-Cel-018465	Caenorhabditis elegans	42.14	3.00e-102	364.00
IUUC-Cre-022704	Chlamydomonas reinhardtii	43.21	1.00e-125	441.00
IUUC-Cne-026784	Cryptococcus neoformans	45.93	2.00e-101	361.00
IUUC-Dre-028533	Danio rerio	44.03	4.00e-111	393.00
IUUC-Dse-031280	Dothistroma septosporum	64.30	0.00e+00	731.00
IUUC-Eeu-034982	Erinaceus europaeus	40.52	5.00e-61	226.00
IUUC-Fox-037980	Fusarium oxysporum	76.11	0.00e+00	862.00
IUUC-Fso-038154	Fusarium solani	76.29	0.00e+00	855.00
IUUC-Gmo-039548	Gadus morhua	46.17	2.00e-112	397.00
IUUC-Ggr-039976	Gaeumannomyces graminis	74.22	0.00e+00	814.00
IUUC-Gac-042249	Gasterosteus aculeatus	44.81	6.00e-110	389.00
IUUC-Gma-042693	Glycine max	39.26	3.00e-101	360.00
IUUC-Hvu-047436	Hordeum vulgare	46.05	1.00e-77	281.00
IUUC-Kpa-049329	Komagataella pastoris	54.43	3.00e-138	483.00
IUUC-Lpe-051501	Leersia perrieri	46.28	8.00e-101	362.00
IUUC-Loc-051736	Lepisosteus oculatus	48.84	4.00e-111	393.00
IUUC-Meu-056419	Macropus eugenii	47.43	2.00e-92	331.00
IUUC-Mor-057146	Magnaporthe oryzae	75.20	0.00e+00	790.00
IUUC-Mpo-057512	Magnaporthe poae	72.53	0.00e+00	809.00
IUUC-Mtr-058139	Medicago truncatula	42.92	3.00e-102	363.00
IUUC-Mla-059028	Melampsora laricipopulina	47.94	1.00e-110	391.00
IUUC-Mvi-060533	Microbotryum violaceum	48.63	3.00e-122	430.00
IUUC-Mac-065643	Musa acuminata	44.87	4.00e-100	356.00
IUUC-Ont-071977	Oreochromis niloticus	45.16	4.00e-112	396.00
IUUC-Oba-075525	Oryza barthii	44.63	8.00e-104	369.00
IUUC-Obr-076468	Oryza brachyantha	44.50	1.00e-105	375.00
IUUC-Ogl-077395	Oryza glaberrima	44.63	8.00e-104	369.00
IUUC-Ogu-078730	Oryza glumaepatula	44.39	3.00e-103	367.00
IUUC-Oin-079797	Oryza indica	44.39	3.00e-103	367.00
IUUC-Olo-080539	Oryza longistaminata	44.15	1.00e-102	365.00
IUUC-Oni-082635	Oryza nivara	44.39	4.00e-103	367.00
IUUC-Opu-083733	Oryza punctata	44.39	2.00e-103	367.00
IUUC-Oru-084560	Oryza rufipogon	44.39	3.00e-103	367.00
IUUC-Osa-085463	Oryza sativa	44.39	3.00e-103	367.00
IUUC-Ola-086667	Oryzias latipes	47.33	3.00e-120	423.00
IUUC-Olu-087881	Ostreococcus lucimarinus	43.62	3.00e-111	393.00
IUUC-Pma-094742	Petromyzon marinus	43.07	4.00e-95	340.00
IUUC-Ppa-095230	Physcomitrella patens	48.28	3.00e-117	413.00
IUUC-Pop-099756	Populus trichocarpa	42.38	5.00e-101	359.00
IUUC-Ppe-101354	Prunus persica	41.61	4.00e-96	343.00
IUUC-Pte-104146	Pyrenophora teres	57.17	2.00e-177	613.00
IUUC-Pyt-104559	Pyrenophora triticirepentis	57.36	7.00e-178	615.00
IUUC-Sce-106227	Saccharomyces cerevisiae	46.89	7.00e-140	488.00
IUUC-Sja-107925	Schizosaccharomyces japonicus	50.61	6.00e-146	508.00
IUUC-Spo-108359	Schizosaccharomyces pombe	49.81	1.00e-143	501.00
IUUC-Smo-108814	Selaginella moellendorffii	48.87	8.00e-114	402.00
IUUC-Sit-110158	Setaria italica	44.02	4.00e-92	330.00
IUUC-Sly-111569	Solanum lycopersicum	43.65	4.00e-93	333.00
IUUC-Stu-112403	Solanum tuberosum	42.59	4.00e-92	330.00
IUUC-Sbi-113839	Sorghum bicolor	44.02	1.00e-90	325.00
IUUC-Sre-115150	Sporisorium reilianum	43.09	1.00e-125	441.00
IUUC-Tru-118535	Takifugu rubripes	44.20	2.00e-119	421.00
IUUC-Tca-121165	Theobroma cacao	38.91	2.00e-101	361.00
IUUC-Tre-122114	Trichoderma reesei	76.94	0.00e+00	830.00
IUUC-Tvi-122437	Trichoderma virens	76.82	0.00e+00	822.00
IUUC-Tae-125625	Triticum aestivum	44.50	3.00e-104	370.00
IUUC-Tur-126307	Triticum urartu	42.07	4.00e-99	353.00
IUUC-Tme-127208	Tuber melanosporum	57.45	1.00e-171	594.00
IUUC-Ttr-129047	Tursiops truncatus	44.50	2.00e-104	371.00
IUUC-Uma-129320	Ustilago maydis	47.68	3.00e-123	434.00
IUUC-Vda-129926	Verticillium dahliae	75.50	0.00e+00	898.00
IUUC-Vvi-131643	Vitis vinifera	42.04	2.00e-94	337.00
IUUC-Yli-134674	Yarrowia lipolytica	50.71	1.00e-126	444.00
IUUC-Zma-135903	Zea mays	44.72	1.00e-88	318.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence